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The map label for this gene is yrkR

Identifier: 154686837

GI number: 154686837

Start: 2524702

End: 2525118

Strand: Reverse

Name: yrkR

Synonym: RBAM_024070

Alternate gene names: 154686837

Gene position: 2525118-2524702 (Counterclockwise)

Preceding gene: 154686838

Following gene: 154686833

Centisome position: 64.44

GC content: 39.57

Gene sequence:

>417_bases
ATGAGATTTTCCAACAATTTCAAAAAGGCACCTTACCTGTTACAAGCGCTTCTCAATGTCTGCCTGTTCTTCCTGGCCAT
AGCCTTAAGCGGACTTCTGATCAGCGAGACATGGTACATTGTGCAATTCGTATACAAGTCACTGTTCAACAAAGTGGACA
GCTATTATGAGATGCTTGGGGAACTGCTTATATTCTTCATGTACTTTGAGTTCATTGCTTTGATTATCAAATACTTCAAA
TCAGACTTTCATTTCCCGCTTCGGTACTTTATTTATATTGGCATCACGGCTGTCATTCGTTTGATTATCATCGATCATGA
TCAGGCGATCTCAACGTTCTGGTGGGCGATGGCCATTCTTGCAATGATTTGTGCATTCTTTATTGTCAATAGACGAAATT
CTGTTGTTGAACATTAA

Upstream 100 bases:

>100_bases
ACAAAAGAATTCCAAGTACTGCATCGTGCTGCGATTTTGGAACAGAAAGATGTAGGCTGCGAATCAAAACGACGAAAATA
TTGAAATAGGAGACAACAAG

Downstream 100 bases:

>100_bases
TAAATTAGTTCACTTTATACCGATACGCCACTGAAATGTCCTATGACTTACTTGAATACTAAATAGGTGTAAAAAGTGGT
TATTCATACGGATTGAAAAA

Product: phosphate-starvation-inducible protein PsiE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MRFSNNFKKAPYLLQALLNVCLFFLAIALSGLLISETWYIVQFVYKSLFNKVDSYYEMLGELLIFFMYFEFIALIIKYFK
SDFHFPLRYFIYIGITAVIRLIIIDHDQAISTFWWAMAILAMICAFFIVNRRNSVVEH

Sequences:

>Translated_138_residues
MRFSNNFKKAPYLLQALLNVCLFFLAIALSGLLISETWYIVQFVYKSLFNKVDSYYEMLGELLIFFMYFEFIALIIKYFK
SDFHFPLRYFIYIGITAVIRLIIIDHDQAISTFWWAMAILAMICAFFIVNRRNSVVEH
>Mature_138_residues
MRFSNNFKKAPYLLQALLNVCLFFLAIALSGLLISETWYIVQFVYKSLFNKVDSYYEMLGELLIFFMYFEFIALIIKYFK
SDFHFPLRYFIYIGITAVIRLIIIDHDQAISTFWWAMAILAMICAFFIVNRRNSVVEH

Specific function: Unknown

COG id: COG3223

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psiE family

Homologues:

Organism=Escherichia coli, GI1790462, Length=80, Percent_Identity=51.25, Blast_Score=96, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSIE_BACA2 (A7Z6Z1)

Other databases:

- EMBL:   CP000560
- RefSeq:   YP_001421998.1
- STRING:   A7Z6Z1
- EnsemblBacteria:   EBBACT00000005846
- GeneID:   5460327
- GenomeReviews:   CP000560_GR
- KEGG:   bay:RBAM_024070
- eggNOG:   COG3223
- GeneTree:   EBGT00050000002011
- HOGENOM:   HBG341415
- OMA:   WWAMAIL
- ProtClustDB:   PRK02833
- BioCyc:   BAMY326423:RBAM_024070-MONOMER
- HAMAP:   MF_01048
- InterPro:   IPR009315
- InterPro:   IPR020948
- PIRSF:   PIRSF029598

Pfam domain/function: PF06146 PsiE

EC number: NA

Molecular weight: Translated: 16447; Mature: 16447

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xaf36364)-; HASH(0x118b76dc)-; HASH(0x11756218)-; HASH(0xd66630c)-;

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFSNNFKKAPYLLQALLNVCLFFLAIALSGLLISETWYIVQFVYKSLFNKVDSYYEMLG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELLIFFMYFEFIALIIKYFKSDFHFPLRYFIYIGITAVIRLIIIDHDQAISTFWWAMAIL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AMICAFFIVNRRNSVVEH
HHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MRFSNNFKKAPYLLQALLNVCLFFLAIALSGLLISETWYIVQFVYKSLFNKVDSYYEMLG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELLIFFMYFEFIALIIKYFKSDFHFPLRYFIYIGITAVIRLIIIDHDQAISTFWWAMAIL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AMICAFFIVNRRNSVVEH
HHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA