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The map label for this gene is yrkQ [H]

Identifier: 154686838

GI number: 154686838

Start: 2525164

End: 2526462

Strand: Reverse

Name: yrkQ [H]

Synonym: RBAM_024080

Alternate gene names: 154686838

Gene position: 2526462-2525164 (Counterclockwise)

Preceding gene: 154686839

Following gene: 154686837

Centisome position: 64.47

GC content: 43.11

Gene sequence:

>1299_bases
TTGGCACATCGTAAATTCACGCTAACCAAAAAACTGGCTTTGCTGATCATGGTTGCTGCGATTGTGAGCGGTGTGATCTT
TCTGACGTTGCAAAAGATTACAGATGATCTGATCGAGGGATATCTGAGTTCGGATGAGTATTATCACAAGGAGTCAGCGA
GATACATTCAAAAATTCAGTCAGTACGTTTCAGAAAATGGGTTGTCTACATCGGATAGAAAAGCGTTTGGCGAGTGGGTC
AAAAAAGAAAATTACATTAACCTCACCATATTTAAGGATCAGGAGCTGCAATATGATTCCGTTTATTCCGAATCGGATTA
TGGAAAGGAAAAGCTGACTCAGTATGCTCAAAATCATTCACATCCTGTCAAGTTCAGCGATGGTGAAGGACGAGTCATTA
TCGACGGTTTCTACTCTTCCCGATATTATGATCTGGCCTTTACATTGGATTTGCTCGGTGCAACCCTCATCTTTTTAATC
ATTGTTCTCTTGGGCATCCGTCAAAGTCTTCGCTACCTTAAAACGCTTCACCAAGAGATTCATATTCTTGAAGGGGGCCA
GCTGGACTACGAGATGACGATAAAAGGGCATGATGAATTAGCGATGATTGCAAAGAGCATTGAGGATCTGCGGAAAGCTT
TCTTGGACAAACTTAAAGCTATCGAGGAATTGCAAGCAGAGAGCCGCAGCCTGGTTACCGAAATGTCGCACGATATGCGC
ACACCGCTGACGTCGCTGATCATGAATCTGGAGTTTGCCAAAAAAGAAGGAGGCGAAGCGGGTACCAGCAAAGATCGTTA
TGTAGCCAATGCTTATGGTAAAGCACTGCAATTAAAAAACTTGTCTGACAATCTGTTTGCGTATTTCCTGCTGAATAAGG
AACATGGGGCCGACCTGGAGACCGTTGCAGTGAAAGAAGTGATCTACGATCTAATATCAGATCAGATTGCTATCCTTCAT
CAGGAGCATTTCCGGGTCCATATTTCAGGCGAGCTGCCGGAAACCTATATTAACGTGAATTTGGAGGAGCTTGGTCGTGT
ATTTGATAATGTGATGTCAAACTTATTTAAATACGCAGATCCGGAAGAAGAAATCAGCATCACGTTTGTATCGGATCAAG
AAATATTTGAGATTCATGTTAGCAATACGATTAAACTTGCGGATGTAACACCGGAAAGCAACGGACTCGGTGAAAGAAGC
ATTGCGCGAATGATGTCCCGCATGCAGGGGCAGTTTCACAGTATACAAAAGAATTCCAAGTACTGCATCGTGCTGCGATT
TTGGAACAGAAAGATGTAG

Upstream 100 bases:

>100_bases
AATACGGTGATGGTGCATATTCGGAAACTGCGCTCCAAAATTGAGGATGATCCGGCACGTCCGGTTTATATAAAAACTGA
ATGGGGAAGAGGATATCGAT

Downstream 100 bases:

>100_bases
GCTGCGAATCAAAACGACGAAAATATTGAAATAGGAGACAACAAGATGAGATTTTCCAACAATTTCAAAAAGGCACCTTA
CCTGTTACAAGCGCTTCTCA

Product: YrkQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 431

Protein sequence:

>432_residues
MAHRKFTLTKKLALLIMVAAIVSGVIFLTLQKITDDLIEGYLSSDEYYHKESARYIQKFSQYVSENGLSTSDRKAFGEWV
KKENYINLTIFKDQELQYDSVYSESDYGKEKLTQYAQNHSHPVKFSDGEGRVIIDGFYSSRYYDLAFTLDLLGATLIFLI
IVLLGIRQSLRYLKTLHQEIHILEGGQLDYEMTIKGHDELAMIAKSIEDLRKAFLDKLKAIEELQAESRSLVTEMSHDMR
TPLTSLIMNLEFAKKEGGEAGTSKDRYVANAYGKALQLKNLSDNLFAYFLLNKEHGADLETVAVKEVIYDLISDQIAILH
QEHFRVHISGELPETYINVNLEELGRVFDNVMSNLFKYADPEEEISITFVSDQEIFEIHVSNTIKLADVTPESNGLGERS
IARMMSRMQGQFHSIQKNSKYCIVLRFWNRKM

Sequences:

>Translated_432_residues
MAHRKFTLTKKLALLIMVAAIVSGVIFLTLQKITDDLIEGYLSSDEYYHKESARYIQKFSQYVSENGLSTSDRKAFGEWV
KKENYINLTIFKDQELQYDSVYSESDYGKEKLTQYAQNHSHPVKFSDGEGRVIIDGFYSSRYYDLAFTLDLLGATLIFLI
IVLLGIRQSLRYLKTLHQEIHILEGGQLDYEMTIKGHDELAMIAKSIEDLRKAFLDKLKAIEELQAESRSLVTEMSHDMR
TPLTSLIMNLEFAKKEGGEAGTSKDRYVANAYGKALQLKNLSDNLFAYFLLNKEHGADLETVAVKEVIYDLISDQIAILH
QEHFRVHISGELPETYINVNLEELGRVFDNVMSNLFKYADPEEEISITFVSDQEIFEIHVSNTIKLADVTPESNGLGERS
IARMMSRMQGQFHSIQKNSKYCIVLRFWNRKM
>Mature_431_residues
AHRKFTLTKKLALLIMVAAIVSGVIFLTLQKITDDLIEGYLSSDEYYHKESARYIQKFSQYVSENGLSTSDRKAFGEWVK
KENYINLTIFKDQELQYDSVYSESDYGKEKLTQYAQNHSHPVKFSDGEGRVIIDGFYSSRYYDLAFTLDLLGATLIFLII
VLLGIRQSLRYLKTLHQEIHILEGGQLDYEMTIKGHDELAMIAKSIEDLRKAFLDKLKAIEELQAESRSLVTEMSHDMRT
PLTSLIMNLEFAKKEGGEAGTSKDRYVANAYGKALQLKNLSDNLFAYFLLNKEHGADLETVAVKEVIYDLISDQIAILHQ
EHFRVHISGELPETYINVNLEELGRVFDNVMSNLFKYADPEEEISITFVSDQEIFEIHVSNTIKLADVTPESNGLGERSI
ARMMSRMQGQFHSIQKNSKYCIVLRFWNRKM

Specific function: Member of the two-component regulatory system yrkQ/yrkP. Probably activates yrkP by phosphorylation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR003661
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 49635; Mature: 49504

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: PS50885 HAMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHRKFTLTKKLALLIMVAAIVSGVIFLTLQKITDDLIEGYLSSDEYYHKESARYIQKFS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
QYVSENGLSTSDRKAFGEWVKKENYINLTIFKDQELQYDSVYSESDYGKEKLTQYAQNHS
HHHHHCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCHHCCCCCCCCCHHHHHHHHHCCC
HPVKFSDGEGRVIIDGFYSSRYYDLAFTLDLLGATLIFLIIVLLGIRQSLRYLKTLHQEI
CCCEEECCCCEEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HILEGGQLDYEMTIKGHDELAMIAKSIEDLRKAFLDKLKAIEELQAESRSLVTEMSHDMR
EEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TPLTSLIMNLEFAKKEGGEAGTSKDRYVANAYGKALQLKNLSDNLFAYFLLNKEHGADLE
CHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCEEECCCCCCEEEEEEEECCCCCCHH
TVAVKEVIYDLISDQIAILHQEHFRVHISGELPETYINVNLEELGRVFDNVMSNLFKYAD
HHHHHHHHHHHHHHHHHHEEHHHEEEEEECCCCCHHEECCHHHHHHHHHHHHHHHHHCCC
PEEEISITFVSDQEIFEIHVSNTIKLADVTPESNGLGERSIARMMSRMQGQFHSIQKNSK
CCCCEEEEEECCCEEEEEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
YCIVLRFWNRKM
EEEEEEECCCCC
>Mature Secondary Structure 
AHRKFTLTKKLALLIMVAAIVSGVIFLTLQKITDDLIEGYLSSDEYYHKESARYIQKFS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
QYVSENGLSTSDRKAFGEWVKKENYINLTIFKDQELQYDSVYSESDYGKEKLTQYAQNHS
HHHHHCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCHHCCCCCCCCCHHHHHHHHHCCC
HPVKFSDGEGRVIIDGFYSSRYYDLAFTLDLLGATLIFLIIVLLGIRQSLRYLKTLHQEI
CCCEEECCCCEEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HILEGGQLDYEMTIKGHDELAMIAKSIEDLRKAFLDKLKAIEELQAESRSLVTEMSHDMR
EEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TPLTSLIMNLEFAKKEGGEAGTSKDRYVANAYGKALQLKNLSDNLFAYFLLNKEHGADLE
CHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCEEECCCCCCEEEEEEEECCCCCCHH
TVAVKEVIYDLISDQIAILHQEHFRVHISGELPETYINVNLEELGRVFDNVMSNLFKYAD
HHHHHHHHHHHHHHHHHHEEHHHEEEEEECCCCCHHEECCHHHHHHHHHHHHHHHHHCCC
PEEEISITFVSDQEIFEIHVSNTIKLADVTPESNGLGERSIARMMSRMQGQFHSIQKNSK
CCCCEEEEEECCCEEEEEEECCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
YCIVLRFWNRKM
EEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]