| Definition | Bacillus amyloliquefaciens FZB42, complete genome. |
|---|---|
| Accession | NC_009725 |
| Length | 3,918,589 |
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The map label for this gene is 154686833
Identifier: 154686833
GI number: 154686833
Start: 2520136
End: 2521392
Strand: Reverse
Name: 154686833
Synonym: RBAM_024030
Alternate gene names: NA
Gene position: 2521392-2520136 (Counterclockwise)
Preceding gene: 154686837
Following gene: 154686831
Centisome position: 64.34
GC content: 46.62
Gene sequence:
>1257_bases ATGAAAAACCTGAAGTCTTGGCGGTACCCGTTGCTTCTGTTAACCGGAATCGGGATAGCAAATATTGGTGAATGGATCTA TTTTTTGTCTCTTAATCTTATTGTCTTAAAAGAAACGGGGTCTGCTTTTGCGGTTTCCATCCTTTATTTAATCAGGCCTG CGGCTGTTTTGATGACAAATGGGTGGGCGGGCAGCATCATCGACCGGTGTAACAAACGGAATATGATGATGTCGCTTGAT TTCATCCGGGCTGCATTCATTGCCGTTCTGCCGCTGATGTTTACAGCACGGTCTTTATTTTCCGTTTATTGTATCGTATT TTTGATTCAAATGGCCAATGCGATGTTTCGTCCGTGTTCCATGGCGTATGTGACGATGCTTATCCCGGCTGAAAGGAGAA AACGATTCAATTCACTAAGGGCTTTGTCGGAATCAGGGGCTTTTCTCCTCGGGCCGGCTGCGGCCGGGCTGCTTTTTATC GCCGGCACGCCGATTTTTGCGATTTGGGTGAATGCGGCGGCTTTAGTGCTGTCCGGTTTCATCACGATGATGCTGCCGAA CCTTGAAAATGGGCCTCACGTACATTCTCCCGCACAGAAGCTTTCTTTGGCAGTTTACAAACAAGATTGGAAGCTCGTCT ATCGCTTCAGCCGAACAGCGCGAAACGTCATGATCATTTATTTTTTATTCAGTCTGGTCATGACCGTTATGCCATCAGCG CTTGATTCGCTTGAAGCCGCTTTTGCAAAAGAGGTTCTTCAGCTGACTGATGCCGATTACGGTTTTCTCGTCAGTGTCTC AGGGGCAGGCATTATCGCGGGGGCGCTTGTCAATGTGTTCTTTAATAAAAAAATGCCGGCTTCTTTATTGATGGGAATGG GCTCTTTATTCACAGCGGCCGGATATATGATTTATGCGTTTTCTGACGTTTTTTGGACGGCTGCTTTCGGATTTTTCCTT CTCGCTTTTTTTCTGGCGTTTGCCAATACAGGCTTTCTGACGTTTTATCAAAAGAATGTTCCGGTGGACATCATGGGGAG AGTGGGGAGCTTTTATTCATTAATCGAAGCCGTCTTCATTATAGTAGTAACGGCGGTTTTCGGAGCAGCTTCTGTCAGTT CTTCCGTCCGCGGCATCGTCATCGCAGGCGCTGCTGTTATGCTGGTGTTGGCAGCCGTTTTATGCTCGTTCTTATTTGCG GCCGCAAAAAGGAGGACTCCTGATGTATTTCAAGCGGATCAATTTAAACAAACATAA
Upstream 100 bases:
>100_bases GGCCGGCACCAAACCGAATTGAGGTGGCATAGCGGGCTGTTTCCCGTCCTCAAGACTTTATTGTCTTGAGGGCGTTTTTT ATTTCTAAGGGAGGGATGAG
Downstream 100 bases:
>100_bases AGAGACGGCCGTTTCGTTTCGTGAGGATTCGTTTTTCGTCAGCTTTGGCACGGCGGATCATTTTAATAGGGATGAATATC TCAGGTGGCTGTCATCCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Permease; Facilitator Superfamily Protein; Facilitator Family Transporter; Facilitator Superfamily Permease
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MKNLKSWRYPLLLLTGIGIANIGEWIYFLSLNLIVLKETGSAFAVSILYLIRPAAVLMTNGWAGSIIDRCNKRNMMMSLD FIRAAFIAVLPLMFTARSLFSVYCIVFLIQMANAMFRPCSMAYVTMLIPAERRKRFNSLRALSESGAFLLGPAAAGLLFI AGTPIFAIWVNAAALVLSGFITMMLPNLENGPHVHSPAQKLSLAVYKQDWKLVYRFSRTARNVMIIYFLFSLVMTVMPSA LDSLEAAFAKEVLQLTDADYGFLVSVSGAGIIAGALVNVFFNKKMPASLLMGMGSLFTAAGYMIYAFSDVFWTAAFGFFL LAFFLAFANTGFLTFYQKNVPVDIMGRVGSFYSLIEAVFIIVVTAVFGAASVSSSVRGIVIAGAAVMLVLAAVLCSFLFA AAKRRTPDVFQADQFKQT
Sequences:
>Translated_418_residues MKNLKSWRYPLLLLTGIGIANIGEWIYFLSLNLIVLKETGSAFAVSILYLIRPAAVLMTNGWAGSIIDRCNKRNMMMSLD FIRAAFIAVLPLMFTARSLFSVYCIVFLIQMANAMFRPCSMAYVTMLIPAERRKRFNSLRALSESGAFLLGPAAAGLLFI AGTPIFAIWVNAAALVLSGFITMMLPNLENGPHVHSPAQKLSLAVYKQDWKLVYRFSRTARNVMIIYFLFSLVMTVMPSA LDSLEAAFAKEVLQLTDADYGFLVSVSGAGIIAGALVNVFFNKKMPASLLMGMGSLFTAAGYMIYAFSDVFWTAAFGFFL LAFFLAFANTGFLTFYQKNVPVDIMGRVGSFYSLIEAVFIIVVTAVFGAASVSSSVRGIVIAGAAVMLVLAAVLCSFLFA AAKRRTPDVFQADQFKQT >Mature_418_residues MKNLKSWRYPLLLLTGIGIANIGEWIYFLSLNLIVLKETGSAFAVSILYLIRPAAVLMTNGWAGSIIDRCNKRNMMMSLD FIRAAFIAVLPLMFTARSLFSVYCIVFLIQMANAMFRPCSMAYVTMLIPAERRKRFNSLRALSESGAFLLGPAAAGLLFI AGTPIFAIWVNAAALVLSGFITMMLPNLENGPHVHSPAQKLSLAVYKQDWKLVYRFSRTARNVMIIYFLFSLVMTVMPSA LDSLEAAFAKEVLQLTDADYGFLVSVSGAGIIAGALVNVFFNKKMPASLLMGMGSLFTAAGYMIYAFSDVFWTAAFGFFL LAFFLAFANTGFLTFYQKNVPVDIMGRVGSFYSLIEAVFIIVVTAVFGAASVSSSVRGIVIAGAAVMLVLAAVLCSFLFA AAKRRTPDVFQADQFKQT
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45767; Mature: 45767
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLKSWRYPLLLLTGIGIANIGEWIYFLSLNLIVLKETGSAFAVSILYLIRPAAVLMTN CCCCCHHCCHHHHHHCCCHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHCCHHHEEEC GWAGSIIDRCNKRNMMMSLDFIRAAFIAVLPLMFTARSLFSVYCIVFLIQMANAMFRPCS CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH MAYVTMLIPAERRKRFNSLRALSESGAFLLGPAAAGLLFIAGTPIFAIWVNAAALVLSGF HHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHEECCCHHHHHHHHHHHHHHHH ITMMLPNLENGPHVHSPAQKLSLAVYKQDWKLVYRFSRTARNVMIIYFLFSLVMTVMPSA HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDSLEAAFAKEVLQLTDADYGFLVSVSGAGIIAGALVNVFFNKKMPASLLMGMGSLFTAA HHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH GYMIYAFSDVFWTAAFGFFLLAFFLAFANTGFLTFYQKNVPVDIMGRVGSFYSLIEAVFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH IVVTAVFGAASVSSSVRGIVIAGAAVMLVLAAVLCSFLFAAAKRRTPDVFQADQFKQT HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MKNLKSWRYPLLLLTGIGIANIGEWIYFLSLNLIVLKETGSAFAVSILYLIRPAAVLMTN CCCCCHHCCHHHHHHCCCHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHCCHHHEEEC GWAGSIIDRCNKRNMMMSLDFIRAAFIAVLPLMFTARSLFSVYCIVFLIQMANAMFRPCS CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH MAYVTMLIPAERRKRFNSLRALSESGAFLLGPAAAGLLFIAGTPIFAIWVNAAALVLSGF HHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHEECCCHHHHHHHHHHHHHHHH ITMMLPNLENGPHVHSPAQKLSLAVYKQDWKLVYRFSRTARNVMIIYFLFSLVMTVMPSA HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDSLEAAFAKEVLQLTDADYGFLVSVSGAGIIAGALVNVFFNKKMPASLLMGMGSLFTAA HHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH GYMIYAFSDVFWTAAFGFFLLAFFLAFANTGFLTFYQKNVPVDIMGRVGSFYSLIEAVFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH IVVTAVFGAASVSSSVRGIVIAGAAVMLVLAAVLCSFLFAAAKRRTPDVFQADQFKQT HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA