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The map label for this gene is fccB [H]

Identifier: 154686408

GI number: 154686408

Start: 2085140

End: 2086339

Strand: Reverse

Name: fccB [H]

Synonym: RBAM_019760

Alternate gene names: 154686408

Gene position: 2086339-2085140 (Counterclockwise)

Preceding gene: 154686409

Following gene: 154686407

Centisome position: 53.24

GC content: 43.83

Gene sequence:

>1200_bases
ATGGCAAAACAAGTTCATTATTCCATTGTAATTGTAGGAGCTGGAACTGCTGGTGTTTCTGTAGCTGCACGTCTCGTCCG
AACTTCCAAAAACCTCAAAGGACAAGTTGCTATCATCGACCCAAAGTCCAAGCATTACTATCAGCCTTTGTGGACGCTAG
TTGGAGCTGGCGCAGCGAAGAAGGAAGAGTCGGAGCGTGATCTAGCTTCACTGATTCCTGCTGGGGTTGATTTGATTAGC
GATGCTGTAACGGTGTTTCGGCCGAGTCAGAACACGCTCCTTACAAAACAAGGAACGACCGTTTCCTATGATTATCTCGT
TGTATCAGCCGGTTTGCAAATCGATTGGGATGGGGTAAAAGGCTTGAAGAACACTGTCGGAAAGAATGGCGTTTGCAGCA
ACTACTCGTATCATACGGTAGACAGTACTTGGGAAAACATCCGCAACTTTAAAGGCGGAACCGCCATTTTTACTCATCCG
GATTCTCCTGTGAAATGCGGGGGAGCTCCACAGAAAATCATGTACTTAGCAGACGATTATTTCCGTAAGTCGAATGTACG
CAATCAATCCGAAATCATATTTGCCTCCGCAAAATCAACTATTTTTGATGTCGCGAAATATGCTAGTTCGCTCGAGAAAG
TCGTCCAGCGCAAGGGCATCCAAACAATGTATAAAAGAAACCTGACCGAAATTCGACCGAATTCAAGAGAAGCCGTGGTC
AAGAATCTGGAGACCAAGGAGCTGGAGATCATGAAATACGATATTCTTCATGTTACTCCTCCGATGATAGCTCCAAAATT
TATTAAAGAGAGTACATTGGCGGATGACAGCGGATGGGTGGACGTTGATCCGTACACTTTAAAGCATAAAAAGTTTAACA
ATGTTTTTGGAATCGGGGACTGCGCAAACTTGCCAACTTCTAAAACAGGAGCAGCCATTCGCAAACAAGCTCCGGTAGTG
GCTAAAAATTTGATTTCTTTGATGACTGGCTCGTCACTAGGTGCGAAGTATAATGGTTATTCCTCTTGTCCGCTGGTAAC
AGGGTACAACAAAGTGGTGCTTGCTGAGTTTGACTATAACAAGGATCCGCAAGAAACATTTCCGTTTGATCAGTCAAAAG
AAAGATTCAGCATGTACTTGTTGAAAAGAAGGTTGCTTCCCATCATATATTGGAATGGCATGTTAAAAGGATTGATGTAA

Upstream 100 bases:

>100_bases
GTCCCCCTATTTAGAAAAATTGATATGAAACTAAACTTAAAAATAGAGCTACTCCTCTATAAAAAAACAACAAATTTTTA
AAAAGAAAAAGGGGATATCT

Downstream 100 bases:

>100_bases
GGAGAGGTCAGGAAGACAAGGACAAAGGTTTTGGTAAATATATAGATTGATATGTATGATAAAAAGTTCGAAAATCCTAA
ACATATTCCGCTTAAACTCG

Product: putative oxidoreductase

Products: NA

Alternate protein names: FCSD; Flavocytochrome c flavoprotein subunit; FC [H]

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MAKQVHYSIVIVGAGTAGVSVAARLVRTSKNLKGQVAIIDPKSKHYYQPLWTLVGAGAAKKEESERDLASLIPAGVDLIS
DAVTVFRPSQNTLLTKQGTTVSYDYLVVSAGLQIDWDGVKGLKNTVGKNGVCSNYSYHTVDSTWENIRNFKGGTAIFTHP
DSPVKCGGAPQKIMYLADDYFRKSNVRNQSEIIFASAKSTIFDVAKYASSLEKVVQRKGIQTMYKRNLTEIRPNSREAVV
KNLETKELEIMKYDILHVTPPMIAPKFIKESTLADDSGWVDVDPYTLKHKKFNNVFGIGDCANLPTSKTGAAIRKQAPVV
AKNLISLMTGSSLGAKYNGYSSCPLVTGYNKVVLAEFDYNKDPQETFPFDQSKERFSMYLLKRRLLPIIYWNGMLKGLM

Sequences:

>Translated_399_residues
MAKQVHYSIVIVGAGTAGVSVAARLVRTSKNLKGQVAIIDPKSKHYYQPLWTLVGAGAAKKEESERDLASLIPAGVDLIS
DAVTVFRPSQNTLLTKQGTTVSYDYLVVSAGLQIDWDGVKGLKNTVGKNGVCSNYSYHTVDSTWENIRNFKGGTAIFTHP
DSPVKCGGAPQKIMYLADDYFRKSNVRNQSEIIFASAKSTIFDVAKYASSLEKVVQRKGIQTMYKRNLTEIRPNSREAVV
KNLETKELEIMKYDILHVTPPMIAPKFIKESTLADDSGWVDVDPYTLKHKKFNNVFGIGDCANLPTSKTGAAIRKQAPVV
AKNLISLMTGSSLGAKYNGYSSCPLVTGYNKVVLAEFDYNKDPQETFPFDQSKERFSMYLLKRRLLPIIYWNGMLKGLM
>Mature_398_residues
AKQVHYSIVIVGAGTAGVSVAARLVRTSKNLKGQVAIIDPKSKHYYQPLWTLVGAGAAKKEESERDLASLIPAGVDLISD
AVTVFRPSQNTLLTKQGTTVSYDYLVVSAGLQIDWDGVKGLKNTVGKNGVCSNYSYHTVDSTWENIRNFKGGTAIFTHPD
SPVKCGGAPQKIMYLADDYFRKSNVRNQSEIIFASAKSTIFDVAKYASSLEKVVQRKGIQTMYKRNLTEIRPNSREAVVK
NLETKELEIMKYDILHVTPPMIAPKFIKESTLADDSGWVDVDPYTLKHKKFNNVFGIGDCANLPTSKTGAAIRKQAPVVA
KNLISLMTGSSLGAKYNGYSSCPLVTGYNKVVLAEFDYNKDPQETFPFDQSKERFSMYLLKRRLLPIIYWNGMLKGLM

Specific function: Unknown

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI10864011, Length=397, Percent_Identity=48.8664987405542, Blast_Score=417, Evalue=1e-117,
Organism=Caenorhabditis elegans, GI17539680, Length=419, Percent_Identity=36.5155131264916, Blast_Score=300, Evalue=1e-81,
Organism=Caenorhabditis elegans, GI115534373, Length=341, Percent_Identity=41.0557184750733, Blast_Score=297, Evalue=7e-81,
Organism=Drosophila melanogaster, GI24657386, Length=383, Percent_Identity=42.0365535248042, Blast_Score=328, Evalue=3e-90,
Organism=Drosophila melanogaster, GI24657391, Length=383, Percent_Identity=42.0365535248042, Blast_Score=328, Evalue=3e-90,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016156
- InterPro:   IPR013027
- InterPro:   IPR015323
- InterPro:   IPR015904
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09242 FCSD-flav_bind; PF07992 Pyr_redox_2 [H]

EC number: NA

Molecular weight: Translated: 44178; Mature: 44047

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKQVHYSIVIVGAGTAGVSVAARLVRTSKNLKGQVAIIDPKSKHYYQPLWTLVGAGAAK
CCCEEEEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCC
KEESERDLASLIPAGVDLISDAVTVFRPSQNTLLTKQGTTVSYDYLVVSAGLQIDWDGVK
CCHHHHHHHHHHHHHHHHHHCCHHEECCCCCEEEEECCCEEEEEEEEEECCCEEECCHHH
GLKNTVGKNGVCSNYSYHTVDSTWENIRNFKGGTAIFTHPDSPVKCGGAPQKIMYLADDY
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHEEEHHHHH
FRKSNVRNQSEIIFASAKSTIFDVAKYASSLEKVVQRKGIQTMYKRNLTEIRPNSREAVV
HHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHCCCCCHHHHH
KNLETKELEIMKYDILHVTPPMIAPKFIKESTLADDSGWVDVDPYTLKHKKFNNVFGIGD
HCCCCCCEEEEEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCEEECCCCCCCEECCCC
CANLPTSKTGAAIRKQAPVVAKNLISLMTGSSLGAKYNGYSSCPLVTGYNKVVLAEFDYN
CCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCEEEEEEECCC
KDPQETFPFDQSKERFSMYLLKRRLLPIIYWNGMLKGLM
CCCHHCCCCCCCHHHHHHHHHHHHHHHEEEECHHHHHCC
>Mature Secondary Structure 
AKQVHYSIVIVGAGTAGVSVAARLVRTSKNLKGQVAIIDPKSKHYYQPLWTLVGAGAAK
CCEEEEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCC
KEESERDLASLIPAGVDLISDAVTVFRPSQNTLLTKQGTTVSYDYLVVSAGLQIDWDGVK
CCHHHHHHHHHHHHHHHHHHCCHHEECCCCCEEEEECCCEEEEEEEEEECCCEEECCHHH
GLKNTVGKNGVCSNYSYHTVDSTWENIRNFKGGTAIFTHPDSPVKCGGAPQKIMYLADDY
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHEEEHHHHH
FRKSNVRNQSEIIFASAKSTIFDVAKYASSLEKVVQRKGIQTMYKRNLTEIRPNSREAVV
HHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHCCCCCHHHHH
KNLETKELEIMKYDILHVTPPMIAPKFIKESTLADDSGWVDVDPYTLKHKKFNNVFGIGD
HCCCCCCEEEEEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCEEECCCCCCCEECCCC
CANLPTSKTGAAIRKQAPVVAKNLISLMTGSSLGAKYNGYSSCPLVTGYNKVVLAEFDYN
CCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCEEEEEEECCC
KDPQETFPFDQSKERFSMYLLKRRLLPIIYWNGMLKGLM
CCCHHCCCCCCCHHHHHHHHHHHHHHHEEEECHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8390993; 1649169; 7939681 [H]