Click here to switch to the map view.

The map label for this gene is yodP [H]

Identifier: 154686385

GI number: 154686385

Start: 2066603

End: 2067469

Strand: Reverse

Name: yodP [H]

Synonym: RBAM_019530

Alternate gene names: 154686385

Gene position: 2067469-2066603 (Counterclockwise)

Preceding gene: 154686386

Following gene: 154686384

Centisome position: 52.76

GC content: 47.75

Gene sequence:

>867_bases
GTGACGGAGCTGATAAAGGAACTGAGGGCTGAAAAGGGAGCGGCCGAGATTGATGCAGACCGTTTCAATGAGCGGCTCAG
AGTCATTCGTTATGACGGACAGATCACGGCGCTTATTCCGGCCGTTTTGGCAGAAGCAAAGCAAGAAGGAGCCCAAAAGG
TAATTTTCTTTGCCAAGCGCGGCGATGAGCCGGAATTTGTCAAGCATCTTTTTATTGTTGAGGGTGTCATAGACGGGTAT
TACAACGGGCATGAGGCTGTTGTGATGGTGCGCTATTTATCAGAGGAACGGAGACGGTCAGATTCATATGTATCAGAAGA
TTCGACTGTTGACCGTTTATATGAGACACCGCGGCGGGGACTGACTCAGACAGAAAACACGCTGATGTTCAGAAAAGCGG
ACGAAGATGATGCAGACCGTTTAACGCACTTATATAAACATGTTTTTCTTACCTATCCGACTCCTGTCTTTAATCCCCTT
TATATTAAAAAAACAATGAGAGAAAACACCATCTATTATGCCGCATTCGATCAGGATCTTCTCATTGGGGCGGCAAGCGC
AGATATCAATCCGGTATTGGGGCACGCTGAAATGACCGATTGCGCGGTTCTGTCAGATTACAGGGGGAACTCCGTAACGG
CACACTTGTTTAAAGCGTTGGAGCAGGAACTCGCGGGCCGGGGAATCATCCATCTTTTTTCCTTGGCCCGTGCAGCGTCT
TACGGGATGAATGCCGTTTTGTATCATGCCGGATACGGCTACAGAGGCAGGCTTGTGAACAACTGCCGCATTTCAGAAGG
GCTCGAAAATATGAATATATGGTGCAAGACTTTACGTTTGGCCATTCATAAGGAGGAATTCGTTTGA

Upstream 100 bases:

>100_bases
GCGCATCAGGCGAATGAATACATTGAAATCCGGGCGTTAATCGATGCCGTCAAAATCATTTCTCTTTTTATCATGGAATG
GTGCGGGGTGGCAGATGGGG

Downstream 100 bases:

>100_bases
CAAACAAATGGTTTCAGCCGAAGCGTCATTGGAAGGAGATTGAATTGTGGAAAGATGTGCCGGAAGACAAGTGGAATGAT
TGGCTGTGGCAGCTCACCCA

Product: YodP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MTELIKELRAEKGAAEIDADRFNERLRVIRYDGQITALIPAVLAEAKQEGAQKVIFFAKRGDEPEFVKHLFIVEGVIDGY
YNGHEAVVMVRYLSEERRRSDSYVSEDSTVDRLYETPRRGLTQTENTLMFRKADEDDADRLTHLYKHVFLTYPTPVFNPL
YIKKTMRENTIYYAAFDQDLLIGAASADINPVLGHAEMTDCAVLSDYRGNSVTAHLFKALEQELAGRGIIHLFSLARAAS
YGMNAVLYHAGYGYRGRLVNNCRISEGLENMNIWCKTLRLAIHKEEFV

Sequences:

>Translated_288_residues
MTELIKELRAEKGAAEIDADRFNERLRVIRYDGQITALIPAVLAEAKQEGAQKVIFFAKRGDEPEFVKHLFIVEGVIDGY
YNGHEAVVMVRYLSEERRRSDSYVSEDSTVDRLYETPRRGLTQTENTLMFRKADEDDADRLTHLYKHVFLTYPTPVFNPL
YIKKTMRENTIYYAAFDQDLLIGAASADINPVLGHAEMTDCAVLSDYRGNSVTAHLFKALEQELAGRGIIHLFSLARAAS
YGMNAVLYHAGYGYRGRLVNNCRISEGLENMNIWCKTLRLAIHKEEFV
>Mature_287_residues
TELIKELRAEKGAAEIDADRFNERLRVIRYDGQITALIPAVLAEAKQEGAQKVIFFAKRGDEPEFVKHLFIVEGVIDGYY
NGHEAVVMVRYLSEERRRSDSYVSEDSTVDRLYETPRRGLTQTENTLMFRKADEDDADRLTHLYKHVFLTYPTPVFNPLY
IKKTMRENTIYYAAFDQDLLIGAASADINPVLGHAEMTDCAVLSDYRGNSVTAHLFKALEQELAGRGIIHLFSLARAASY
GMNAVLYHAGYGYRGRLVNNCRISEGLENMNIWCKTLRLAIHKEEFV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181
- InterPro:   IPR022525 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: NA

Molecular weight: Translated: 32843; Mature: 32712

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTELIKELRAEKGAAEIDADRFNERLRVIRYDGQITALIPAVLAEAKQEGAQKVIFFAKR
CHHHHHHHHHHCCCCCCCHHHHHCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEC
GDEPEFVKHLFIVEGVIDGYYNGHEAVVMVRYLSEERRRSDSYVSEDSTVDRLYETPRRG
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCC
LTQTENTLMFRKADEDDADRLTHLYKHVFLTYPTPVFNPLYIKKTMRENTIYYAAFDQDL
CCCCCCEEEEEECCCCHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCEEEEEEECCCE
LIGAASADINPVLGHAEMTDCAVLSDYRGNSVTAHLFKALEQELAGRGIIHLFSLARAAS
EEEECCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
YGMNAVLYHAGYGYRGRLVNNCRISEGLENMNIWCKTLRLAIHKEEFV
CCCCEEEEECCCCCCCCEECCCCHHCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TELIKELRAEKGAAEIDADRFNERLRVIRYDGQITALIPAVLAEAKQEGAQKVIFFAKR
HHHHHHHHHHCCCCCCCHHHHHCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEC
GDEPEFVKHLFIVEGVIDGYYNGHEAVVMVRYLSEERRRSDSYVSEDSTVDRLYETPRRG
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCC
LTQTENTLMFRKADEDDADRLTHLYKHVFLTYPTPVFNPLYIKKTMRENTIYYAAFDQDL
CCCCCCEEEEEECCCCHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCEEEEEEECCCE
LIGAASADINPVLGHAEMTDCAVLSDYRGNSVTAHLFKALEQELAGRGIIHLFSLARAAS
EEEECCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
YGMNAVLYHAGYGYRGRLVNNCRISEGLENMNIWCKTLRLAIHKEEFV
CCCCEEEEECCCCCCCCEECCCCHHCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]