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The map label for this gene is yobT [H]

Identifier: 154686319

GI number: 154686319

Start: 2010051

End: 2010770

Strand: Reverse

Name: yobT [H]

Synonym: RBAM_018870

Alternate gene names: 154686319

Gene position: 2010770-2010051 (Counterclockwise)

Preceding gene: 154686321

Following gene: 154686318

Centisome position: 51.31

GC content: 49.03

Gene sequence:

>720_bases
ATGAGAATCTTACAATACGGAAGTGTTTGGCAGCTGACTTTTTTTCCAGCGCTTTTCCCGGTGAATTGTTATTTGGTTGA
AGAAGAAGAAGGAGTAACCCTGATTGACGCCGGACTGCCTAACAGTCATAAAGGAATCAAACAAGCATTGCGGCAGCTTG
GGAAGCCGCTGAATGACATATTACTCACCCACGCGCACGGGGATCACATCGGTTCGCTTGACTCATTAGCTGCGGAATTT
CCGGATGCTTCCGTCTGTATTTCTGAGCGGGATTCTTTCTTGCTGAAAGGTGACACTTCATTATTTGAGCATGAAGCACA
AACGCCGATAAAGGGGGGAGTGCCGAAAAATGTTCAGACCGAACCTGATCGCCTGCTGAAAGGCGGCGAGCGGATCGGAT
CTTTACTTGTCATTCCCGCTCCCGGTCATACGCCGGGAAGCCTCGCTTTTAAAGATATGAGAAATGATATGCTGATCGTC
GGAGATGCCTTTCAAGTACGGGGCGGCCTTGCTGTTTCTGGGAAGCTGAAATGGAAATTTCCGTTTCCGGCTTTTGCTAC
GTGGAATAAAGAAGAAGCTGTAAAAACAGCAAGAACACTTATCGCTCATCAACCAAGCAGTCTGGCCGCCGGACATGGAA
ATGTTCTCTGCAATCCCGTTGAAATGATGGCTGAGGCTGTTGAGGAAGCCGAACGAAGCCTGCCGGGAGGCCGATCATAA

Upstream 100 bases:

>100_bases
AAGCGCCCGCGCCTTTTTCAGGATTTAAACATAAAACTCTTGAAAAACTAACGGTATTAGTTATAATAAAACTAATGATA
TTAGTTTTAGGGGGATGTTG

Downstream 100 bases:

>100_bases
TGTCACCGAGAGTCGGAATGAGCCTTGACATGATATTGAGAGCTGCAGCAGGCATCGCTGACGAAAAAGGGCTGAACGAA
GTGACGCTTGCGGCTGTTGC

Product: YobT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MRILQYGSVWQLTFFPALFPVNCYLVEEEEGVTLIDAGLPNSHKGIKQALRQLGKPLNDILLTHAHGDHIGSLDSLAAEF
PDASVCISERDSFLLKGDTSLFEHEAQTPIKGGVPKNVQTEPDRLLKGGERIGSLLVIPAPGHTPGSLAFKDMRNDMLIV
GDAFQVRGGLAVSGKLKWKFPFPAFATWNKEEAVKTARTLIAHQPSSLAAGHGNVLCNPVEMMAEAVEEAERSLPGGRS

Sequences:

>Translated_239_residues
MRILQYGSVWQLTFFPALFPVNCYLVEEEEGVTLIDAGLPNSHKGIKQALRQLGKPLNDILLTHAHGDHIGSLDSLAAEF
PDASVCISERDSFLLKGDTSLFEHEAQTPIKGGVPKNVQTEPDRLLKGGERIGSLLVIPAPGHTPGSLAFKDMRNDMLIV
GDAFQVRGGLAVSGKLKWKFPFPAFATWNKEEAVKTARTLIAHQPSSLAAGHGNVLCNPVEMMAEAVEEAERSLPGGRS
>Mature_239_residues
MRILQYGSVWQLTFFPALFPVNCYLVEEEEGVTLIDAGLPNSHKGIKQALRQLGKPLNDILLTHAHGDHIGSLDSLAAEF
PDASVCISERDSFLLKGDTSLFEHEAQTPIKGGVPKNVQTEPDRLLKGGERIGSLLVIPAPGHTPGSLAFKDMRNDMLIV
GDAFQVRGGLAVSGKLKWKFPFPAFATWNKEEAVKTARTLIAHQPSSLAAGHGNVLCNPVEMMAEAVEEAERSLPGGRS

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]

Homologues:

Organism=Escherichia coli, GI1787158, Length=164, Percent_Identity=33.5365853658537, Blast_Score=67, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 25859; Mature: 25859

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: PS00136 SUBTILASE_ASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILQYGSVWQLTFFPALFPVNCYLVEEEEGVTLIDAGLPNSHKGIKQALRQLGKPLNDI
CEEECCCCEEEEEEHHHEECEEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHH
LLTHAHGDHIGSLDSLAAEFPDASVCISERDSFLLKGDTSLFEHEAQTPIKGGVPKNVQT
EEECCCCCCCCCHHHHHHHCCCCEEEECCCCCEEEECCCHHHHHCCCCCCCCCCCCCCCC
EPDRLLKGGERIGSLLVIPAPGHTPGSLAFKDMRNDMLIVGDAFQVRGGLAVSGKLKWKF
CHHHHHHCHHHHCCEEEEECCCCCCCCHHHHHCCCCEEEEECCEEECCCEEEECEEEEEE
PFPAFATWNKEEAVKTARTLIAHQPSSLAAGHGNVLCNPVEMMAEAVEEAERSLPGGRS
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRILQYGSVWQLTFFPALFPVNCYLVEEEEGVTLIDAGLPNSHKGIKQALRQLGKPLNDI
CEEECCCCEEEEEEHHHEECEEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHH
LLTHAHGDHIGSLDSLAAEFPDASVCISERDSFLLKGDTSLFEHEAQTPIKGGVPKNVQT
EEECCCCCCCCCHHHHHHHCCCCEEEECCCCCEEEECCCHHHHHCCCCCCCCCCCCCCCC
EPDRLLKGGERIGSLLVIPAPGHTPGSLAFKDMRNDMLIVGDAFQVRGGLAVSGKLKWKF
CHHHHHHCHHHHCCEEEEECCCCCCCCHHHHHCCCCEEEEECCEEECCCEEEECEEEEEE
PFPAFATWNKEEAVKTARTLIAHQPSSLAAGHGNVLCNPVEMMAEAVEEAERSLPGGRS
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]