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The map label for this gene is yozA [H]

Identifier: 154686321

GI number: 154686321

Start: 2011546

End: 2011878

Strand: Reverse

Name: yozA [H]

Synonym: RBAM_018890

Alternate gene names: 154686321

Gene position: 2011878-2011546 (Counterclockwise)

Preceding gene: 154686323

Following gene: 154686319

Centisome position: 51.34

GC content: 43.24

Gene sequence:

>333_bases
ATGACTGAATTTCACGAATCCGGAAACAAAAATGACCCCGCTGTCGATTTAGATGAGGAAACTTTATTTTTGGTTGCCCA
GACTTTTAAGGCGTTGTCTGATCCGACCAGAATCAGAATTCTCCATTTGCTGTCACAGGGTGAGCACGCGGTAAATGATA
TCGCAGAAAAGCTGAATTTGCTGCAGTCTACCGTTTCTCATCAGCTGCGTTTTCTTAAAAATCTGCGCCTCGTCAAATCA
CGCAGAGAAGGAACATCCATCTATTATTCTCCTGAGGATGAACATGTGTTAGATGTGCTTCAGCAAATGATTCACCATAC
GCGGCACGATTAA

Upstream 100 bases:

>100_bases
ATAAATTTAAAATAACGGTTCTTTTGTCAGGCGCAGGATGTATCTGCATCAATTGACATTTGGTATAATTGGGCTACTTG
AGAAAAGAAGGGTGAGGTAT

Downstream 100 bases:

>100_bases
AAAACATCCCTGCTTTTTAGACAGGGATGTCAGCCGTACTGACTGTTATTGGTTTGGTCTCTGCTCGTTTTTAAAACATA
AAAAGAGAAGCCGCTGTAAT

Product: YozA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MTEFHESGNKNDPAVDLDEETLFLVAQTFKALSDPTRIRILHLLSQGEHAVNDIAEKLNLLQSTVSHQLRFLKNLRLVKS
RREGTSIYYSPEDEHVLDVLQQMIHHTRHD

Sequences:

>Translated_110_residues
MTEFHESGNKNDPAVDLDEETLFLVAQTFKALSDPTRIRILHLLSQGEHAVNDIAEKLNLLQSTVSHQLRFLKNLRLVKS
RREGTSIYYSPEDEHVLDVLQQMIHHTRHD
>Mature_109_residues
TEFHESGNKNDPAVDLDEETLFLVAQTFKALSDPTRIRILHLLSQGEHAVNDIAEKLNLLQSTVSHQLRFLKNLRLVKSR
REGTSIYYSPEDEHVLDVLQQMIHHTRHD

Specific function: Metal-responsive transcriptional regulator that represses transcription of cadA and the czcD-trkA operon by binding specifically to their promoter. Binding of zinc causes the repressor to dissociate from the DNA [H]

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 12742; Mature: 12610

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEFHESGNKNDPAVDLDEETLFLVAQTFKALSDPTRIRILHLLSQGEHAVNDIAEKLNL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHH
LQSTVSHQLRFLKNLRLVKSRREGTSIYYSPEDEHVLDVLQQMIHHTRHD
HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TEFHESGNKNDPAVDLDEETLFLVAQTFKALSDPTRIRILHLLSQGEHAVNDIAEKLNL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHH
LQSTVSHQLRFLKNLRLVKSRREGTSIYYSPEDEHVLDVLQQMIHHTRHD
HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]