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The map label for this gene is yhfU [H]

Identifier: 154685489

GI number: 154685489

Start: 1036119

End: 1036676

Strand: Reverse

Name: yhfU [H]

Synonym: RBAM_010550

Alternate gene names: 154685489

Gene position: 1036676-1036119 (Counterclockwise)

Preceding gene: 154685490

Following gene: 154685488

Centisome position: 26.46

GC content: 51.61

Gene sequence:

>558_bases
ATGAAATTGACAGAAATGATGCATATTGCCGTGTTTACCGCCATTATGGGACTTTTGGGGCTGCTCCCGCCGCTTTTCTT
ATCCTTTACGCCGGTTCCGATTACGCTCCAGACGATCGGTGTGCTCTTATCGGGAAGCATCCTAAAACCGAAAGCGGCGT
TTTTAAGCCAATTGCTGTTTTTGCTGATTGTGGCATGCGGAGCGCCTCTCCTTTCAGGCGGCAGAGGCGGATTCGGGGTT
TTTTTCGGGCCGAGCGCCGGATACCTCATCGCATATCCGCTGGCGGCATTACTGCTGAGCCTCAGCATCCAAGGCCTTCG
CTCAGCTGCTGTCCCCCATTTGTTTATCAGACAGTTCTTGTTCGGCGTGCTGTTTTTGTATGTCATCGGCATTCCCGTTC
AGGCTTTTATGATGCACATTGATATCTTAACTGCCGTAAAGCTCAGCCTCATCTATGTGCCCGGAGATCTGCTTAAAGCG
GCCGCAGCCTCATTCGCAGCCGTAAGAATCAGGAAAACTCTTCAAGCAAGCCGGCTTTTGCCGACGAAAGGAAGCTGA

Upstream 100 bases:

>100_bases
GCCGGTCTTTTTAATGTTAACTTAAAATATAATAGAGTTGACATATATAAAGACTCGCTTTATTGTATAAACATATTTTG
ATAAGCTGGAGGAATACATA

Downstream 100 bases:

>100_bases
TTTTAGTCATCATGATTACATCATCATATTCAGATACAGCCGGACAAGCGCCGGAACAGATCGCAATTCAGACAGAAACA
GAACAGATCACCTATCAAAC

Product: YhfU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MKLTEMMHIAVFTAIMGLLGLLPPLFLSFTPVPITLQTIGVLLSGSILKPKAAFLSQLLFLLIVACGAPLLSGGRGGFGV
FFGPSAGYLIAYPLAALLLSLSIQGLRSAAVPHLFIRQFLFGVLFLYVIGIPVQAFMMHIDILTAVKLSLIYVPGDLLKA
AAASFAAVRIRKTLQASRLLPTKGS

Sequences:

>Translated_185_residues
MKLTEMMHIAVFTAIMGLLGLLPPLFLSFTPVPITLQTIGVLLSGSILKPKAAFLSQLLFLLIVACGAPLLSGGRGGFGV
FFGPSAGYLIAYPLAALLLSLSIQGLRSAAVPHLFIRQFLFGVLFLYVIGIPVQAFMMHIDILTAVKLSLIYVPGDLLKA
AAASFAAVRIRKTLQASRLLPTKGS
>Mature_185_residues
MKLTEMMHIAVFTAIMGLLGLLPPLFLSFTPVPITLQTIGVLLSGSILKPKAAFLSQLLFLLIVACGAPLLSGGRGGFGV
FFGPSAGYLIAYPLAALLLSLSIQGLRSAAVPHLFIRQFLFGVLFLYVIGIPVQAFMMHIDILTAVKLSLIYVPGDLLKA
AAASFAAVRIRKTLQASRLLPTKGS

Specific function: Probable biotin transporter [H]

COG id: COG1268

COG function: function code R; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BioY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003784 [H]

Pfam domain/function: PF02632 BioY [H]

EC number: NA

Molecular weight: Translated: 19638; Mature: 19638

Theoretical pI: Translated: 11.00; Mature: 11.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTEMMHIAVFTAIMGLLGLLPPLFLSFTPVPITLQTIGVLLSGSILKPKAAFLSQLLF
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
LLIVACGAPLLSGGRGGFGVFFGPSAGYLIAYPLAALLLSLSIQGLRSAAVPHLFIRQFL
HHHHHHCCHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGVLFLYVIGIPVQAFMMHIDILTAVKLSLIYVPGDLLKAAAASFAAVRIRKTLQASRLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PTKGS
CCCCC
>Mature Secondary Structure
MKLTEMMHIAVFTAIMGLLGLLPPLFLSFTPVPITLQTIGVLLSGSILKPKAAFLSQLLF
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
LLIVACGAPLLSGGRGGFGVFFGPSAGYLIAYPLAALLLSLSIQGLRSAAVPHLFIRQFL
HHHHHHCCHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGVLFLYVIGIPVQAFMMHIDILTAVKLSLIYVPGDLLKAAAASFAAVRIRKTLQASRLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PTKGS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]