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The map label for this gene is hemAT [H]

Identifier: 154685490

GI number: 154685490

Start: 1036807

End: 1038099

Strand: Reverse

Name: hemAT [H]

Synonym: RBAM_010560

Alternate gene names: 154685490

Gene position: 1038099-1036807 (Counterclockwise)

Preceding gene: 154685491

Following gene: 154685489

Centisome position: 26.49

GC content: 45.09

Gene sequence:

>1293_bases
TTGTTATTTAAAAAAGACCGCAAAAAAGAAACAGCTTATTTTTCGGAAGCCGATGGAAAAAAACGCATCGCGCTTTCAAA
TCAATATGCAGATGTCCAAAAACAGCTGAAAATGGTCAGGCTCGGAAACGAAGAACTTCATGTGCTTGAAGAGCTGCAGC
CGTTAATTAAAGAACATATCTCAACAATCGTCGATTCCTTTTACCGAAACCTGGATCACGAAAAATCATTAATGACGATC
ATTAACGACCACAGCACGGTCGAGCGCCTGAAAAAAACATTACGGCGTCATATCCATGAGATGTTTGCCGGCACGATTGA
TGATGAATTCATTGAAAAAAGACAGCGCATCGCTTCCATCCACTTGCGGATCGGCCTTGAACCGAAATGGTATATGGGAG
CGTTCCAGGATCTGCTTCTGTCGATGATGAACATATATGAAGCAACCATTCCGGATTTGCATGAGCTTTTAAAAGCGATC
AAAGCGACGACGAAAATATTGAATCTTGAACAGCAGCTCGTCCTTGAAGCATTCCAGACTGAATATAACTGCCAGCGTGA
CGAACAAGAGGAAAAGAAAGCCCGCCTTCATCAAAAAATCCAGGAAACATCCGGATCACTTGCTGATTTGTTTTCAGAAA
CGAGCAGAGCCGTGCAGGAGCTGGTCGATAAATCCGAGGGCATTTCCAAGGCGTCAAAAGCCGGCACTGTCACTTCCGTA
CATGTCGAAGAAAAATCAATCGGCGGGAAAAAAGAGCTTGAAAGCCAGCAGAAGCAGATGAATAAAATCGACGCCAGCCT
TCTGCAGATTGAAGAAGAAATGGACAAGCTGAATGACATCGCCCAGCAGATCGAAAAAATCTTCGGCATCGTGACGGGGA
TCGCCGAGCAAACGAATCTCCTGTCACTCAACGCTTCAATAGAATCCGCGAGAGCCGGGGAGCACGGCAAAGGGTTCGCC
GTTGTCGCGACGGAGGTAAGAAAGCTTTCAGAGGATACGAAAAAAACCGTTTCCACCGTATCAGAGCTCGTGAACAATAC
CAATACACAAATCAACATCGTGTCCAAACATATCAAAGATGTAAACGGACTTGTAAGTGAAACGAAAGAAAAAATGGCGC
AGATCAACCGTTTGTTTGATGACATCGTCCAAAGCATGAAAACGAGCAAAGACCAGACAGGCAAAATCGACGTTGATTTG
CAGGCCTTTCTCGGCGGTCTTCAAGAAGTCAGCCGCGCCGTTTCCCACGTTGCATCATCCGTTGATTCACTTGTTATCCT
TACAGAAGAATAA

Upstream 100 bases:

>100_bases
TTTTATTTTTTTTTGCATTAAAATATTTTTATCAGATTCCTTCATTCAAGTTCCTTCCATACCGATAAAAAGAAAAAGAG
AATATCTGGGGGAACTTATA

Downstream 100 bases:

>100_bases
AGATAAACCGACCGGCCTTTTTCATAAAGGGCCGGTCTTTTTAATGTTAACTTAAAATATAATAGAGTTGACATATATAA
AGACTCGCTTTATTGTATAA

Product: HemAT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MLFKKDRKKETAYFSEADGKKRIALSNQYADVQKQLKMVRLGNEELHVLEELQPLIKEHISTIVDSFYRNLDHEKSLMTI
INDHSTVERLKKTLRRHIHEMFAGTIDDEFIEKRQRIASIHLRIGLEPKWYMGAFQDLLLSMMNIYEATIPDLHELLKAI
KATTKILNLEQQLVLEAFQTEYNCQRDEQEEKKARLHQKIQETSGSLADLFSETSRAVQELVDKSEGISKASKAGTVTSV
HVEEKSIGGKKELESQQKQMNKIDASLLQIEEEMDKLNDIAQQIEKIFGIVTGIAEQTNLLSLNASIESARAGEHGKGFA
VVATEVRKLSEDTKKTVSTVSELVNNTNTQINIVSKHIKDVNGLVSETKEKMAQINRLFDDIVQSMKTSKDQTGKIDVDL
QAFLGGLQEVSRAVSHVASSVDSLVILTEE

Sequences:

>Translated_430_residues
MLFKKDRKKETAYFSEADGKKRIALSNQYADVQKQLKMVRLGNEELHVLEELQPLIKEHISTIVDSFYRNLDHEKSLMTI
INDHSTVERLKKTLRRHIHEMFAGTIDDEFIEKRQRIASIHLRIGLEPKWYMGAFQDLLLSMMNIYEATIPDLHELLKAI
KATTKILNLEQQLVLEAFQTEYNCQRDEQEEKKARLHQKIQETSGSLADLFSETSRAVQELVDKSEGISKASKAGTVTSV
HVEEKSIGGKKELESQQKQMNKIDASLLQIEEEMDKLNDIAQQIEKIFGIVTGIAEQTNLLSLNASIESARAGEHGKGFA
VVATEVRKLSEDTKKTVSTVSELVNNTNTQINIVSKHIKDVNGLVSETKEKMAQINRLFDDIVQSMKTSKDQTGKIDVDL
QAFLGGLQEVSRAVSHVASSVDSLVILTEE
>Mature_430_residues
MLFKKDRKKETAYFSEADGKKRIALSNQYADVQKQLKMVRLGNEELHVLEELQPLIKEHISTIVDSFYRNLDHEKSLMTI
INDHSTVERLKKTLRRHIHEMFAGTIDDEFIEKRQRIASIHLRIGLEPKWYMGAFQDLLLSMMNIYEATIPDLHELLKAI
KATTKILNLEQQLVLEAFQTEYNCQRDEQEEKKARLHQKIQETSGSLADLFSETSRAVQELVDKSEGISKASKAGTVTSV
HVEEKSIGGKKELESQQKQMNKIDASLLQIEEEMDKLNDIAQQIEKIFGIVTGIAEQTNLLSLNASIESARAGEHGKGFA
VVATEVRKLSEDTKKTVSTVSELVNNTNTQINIVSKHIKDVNGLVSETKEKMAQINRLFDDIVQSMKTSKDQTGKIDVDL
QAFLGGLQEVSRAVSHVASSVDSLVILTEE

Specific function: Heme-containing signal transducer responsible for aerotaxis, the migratory response toward or away from oxygen [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=171, Percent_Identity=31.5789473684211, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1789453, Length=110, Percent_Identity=38.1818181818182, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI2367378, Length=132, Percent_Identity=34.0909090909091, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1788195, Length=128, Percent_Identity=34.375, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1787690, Length=142, Percent_Identity=29.5774647887324, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004089
- InterPro:   IPR012292
- InterPro:   IPR009050 [H]

Pfam domain/function: PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 48589; Mature: 48589

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFKKDRKKETAYFSEADGKKRIALSNQYADVQKQLKMVRLGNEELHVLEELQPLIKEHI
CCCCCCCCHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
STIVDSFYRNLDHEKSLMTIINDHSTVERLKKTLRRHIHEMFAGTIDDEFIEKRQRIASI
HHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
HLRIGLEPKWYMGAFQDLLLSMMNIYEATIPDLHELLKAIKATTKILNLEQQLVLEAFQT
HHEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYNCQRDEQEEKKARLHQKIQETSGSLADLFSETSRAVQELVDKSEGISKASKAGTVTSV
HHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEE
HVEEKSIGGKKELESQQKQMNKIDASLLQIEEEMDKLNDIAQQIEKIFGIVTGIAEQTNL
EEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
LSLNASIESARAGEHGKGFAVVATEVRKLSEDTKKTVSTVSELVNNTNTQINIVSKHIKD
EEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHH
VNGLVSETKEKMAQINRLFDDIVQSMKTSKDQTGKIDVDLQAFLGGLQEVSRAVSHVASS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHH
VDSLVILTEE
HCCEEEEECC
>Mature Secondary Structure
MLFKKDRKKETAYFSEADGKKRIALSNQYADVQKQLKMVRLGNEELHVLEELQPLIKEHI
CCCCCCCCHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
STIVDSFYRNLDHEKSLMTIINDHSTVERLKKTLRRHIHEMFAGTIDDEFIEKRQRIASI
HHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
HLRIGLEPKWYMGAFQDLLLSMMNIYEATIPDLHELLKAIKATTKILNLEQQLVLEAFQT
HHEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYNCQRDEQEEKKARLHQKIQETSGSLADLFSETSRAVQELVDKSEGISKASKAGTVTSV
HHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEE
HVEEKSIGGKKELESQQKQMNKIDASLLQIEEEMDKLNDIAQQIEKIFGIVTGIAEQTNL
EEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
LSLNASIESARAGEHGKGFAVVATEVRKLSEDTKKTVSTVSELVNNTNTQINIVSKHIKD
EEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHH
VNGLVSETKEKMAQINRLFDDIVQSMKTSKDQTGKIDVDLQAFLGGLQEVSRAVSHVASS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHH
VDSLVILTEE
HCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377; 10676961; 11821422 [H]