| Definition | Bacillus amyloliquefaciens FZB42, complete genome. |
|---|---|
| Accession | NC_009725 |
| Length | 3,918,589 |
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The map label for this gene is ydiK [H]
Identifier: 154685100
GI number: 154685100
Start: 618320
End: 618511
Strand: Reverse
Name: ydiK [H]
Synonym: RBAM_006450
Alternate gene names: 154685100
Gene position: 618511-618320 (Counterclockwise)
Preceding gene: 154685101
Following gene: 154685095
Centisome position: 15.78
GC content: 39.06
Gene sequence:
>192_bases ATGAGGAACCCAATGACTTGGGGCTTGATTTATTTCGCAGTCGGCTGTATCTTTACGTATTTGGCCGCAAGCTCTCCGGG AAGCATGTGGTCTTTTTATTCCATACTGCTGATGGTTTTCGCCGCTTATAATATCAGCATCTCGTTTAAAATGTTCGCTT TCTCATTTAAAGTGAAAAAAAATCAAAAATAA
Upstream 100 bases:
>100_bases TGATGAATACCATTGTCGTGGTCATGCAGCTCGGCCCCGCCCAAAAATATATTGAACAGCATAGTGAGCAAATGCAATTA ATTATTGGAGGATTGTTTGT
Downstream 100 bases:
>100_bases AAGAAAAGCCATTTCTCATCATTGAGAAATGGCTTTTTTATGCTGATACGTCCTGATCGGATTCACTGCTGGTCTGCCTT TTCCGATACGCCGCTTTTGA
Product: YdiK
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 63; Mature: 63
Protein sequence:
>63_residues MRNPMTWGLIYFAVGCIFTYLAASSPGSMWSFYSILLMVFAAYNISISFKMFAFSFKVKKNQK
Sequences:
>Translated_63_residues MRNPMTWGLIYFAVGCIFTYLAASSPGSMWSFYSILLMVFAAYNISISFKMFAFSFKVKKNQK >Mature_63_residues MRNPMTWGLIYFAVGCIFTYLAASSPGSMWSFYSILLMVFAAYNISISFKMFAFSFKVKKNQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7254; Mature: 7254
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 7.9 %Met (Translated Protein) 9.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 7.9 %Met (Mature Protein) 9.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNPMTWGLIYFAVGCIFTYLAASSPGSMWSFYSILLMVFAAYNISISFKMFAFSFKVKK CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEEEEEEEEEECC NQK CCC >Mature Secondary Structure MRNPMTWGLIYFAVGCIFTYLAASSPGSMWSFYSILLMVFAAYNISISFKMFAFSFKVKK CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEEEEEEEEEECC NQK CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9202461; 9384377 [H]