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The map label for this gene is ydiL [H]

Identifier: 154685101

GI number: 154685101

Start: 618508

End: 619242

Strand: Reverse

Name: ydiL [H]

Synonym: RBAM_006460

Alternate gene names: 154685101

Gene position: 619242-618508 (Counterclockwise)

Preceding gene: 154685108

Following gene: 154685100

Centisome position: 15.8

GC content: 45.03

Gene sequence:

>735_bases
TTGAGAAAACAGTATTGGTATATCATTTTGACATATGTTATCATGCAGCTTTCCGCATTGATCGGCATTCCTTTAATGTA
CAAATTCGGCTATGCGGGCGGGCACCCTACGAATGCGAATCTCACCATGGCTCAGGGGATTTATTCCGTCGTAAGCTTTT
TTATCTGCCTGATTATCGTTCTCTTGATTTTGAGAACCGCGCCGAAGCAGACATTAAGAAACGGGAAGAAAGCATCCGCC
GGCATGTCCGTTCTCTGGGCGGTCGCGGGAATATGGCTCGCTTTATTTTCTCAGGGAATCGCCGGGATGATTGAGCAGTA
TGTCTTTCATGTGGGCAGCGGTTCCGAAAACACGAAAGCCATTCTCAGCATTATTAAAGCCATGCCGCTCATGATTATCG
TTTCTTCTATCGTCGGGCCGATTCTTGAAGAAATCATTTTCCGGAAGATCATTTTCGGTGTATTATATGAAAAAACGAAT
TTCTTTATCGCCGGACTGATCAGTTCCGTCATTTTCGGCATTGTGCATCAAGACCTCACGCACCTGCTGCTGTATACGGC
CATGGGCTTTACCTTTGCGTTCTTGTATGTGCAGACGAAACGGATTATTGTGCCGATATTCGCCCATGTCATGATGAATA
CCATTGTCGTGGTCATGCAGCTCGGCCCCGCCCAAAAATATATTGAACAGCATAGTGAGCAAATGCAATTAATTATTGGA
GGATTGTTTGTATGA

Upstream 100 bases:

>100_bases
TCTCTCTCACACTGATTTTCTCCTTTTTTCACGTCAAGTTCACTTGTGTTACAATAAGAACAAATAAGTTGATTTTATAG
GATAAAGGAGTACATATCAT

Downstream 100 bases:

>100_bases
GGAACCCAATGACTTGGGGCTTGATTTATTTCGCAGTCGGCTGTATCTTTACGTATTTGGCCGCAAGCTCTCCGGGAAGC
ATGTGGTCTTTTTATTCCAT

Product: YdiL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MRKQYWYIILTYVIMQLSALIGIPLMYKFGYAGGHPTNANLTMAQGIYSVVSFFICLIIVLLILRTAPKQTLRNGKKASA
GMSVLWAVAGIWLALFSQGIAGMIEQYVFHVGSGSENTKAILSIIKAMPLMIIVSSIVGPILEEIIFRKIIFGVLYEKTN
FFIAGLISSVIFGIVHQDLTHLLLYTAMGFTFAFLYVQTKRIIVPIFAHVMMNTIVVVMQLGPAQKYIEQHSEQMQLIIG
GLFV

Sequences:

>Translated_244_residues
MRKQYWYIILTYVIMQLSALIGIPLMYKFGYAGGHPTNANLTMAQGIYSVVSFFICLIIVLLILRTAPKQTLRNGKKASA
GMSVLWAVAGIWLALFSQGIAGMIEQYVFHVGSGSENTKAILSIIKAMPLMIIVSSIVGPILEEIIFRKIIFGVLYEKTN
FFIAGLISSVIFGIVHQDLTHLLLYTAMGFTFAFLYVQTKRIIVPIFAHVMMNTIVVVMQLGPAQKYIEQHSEQMQLIIG
GLFV
>Mature_244_residues
MRKQYWYIILTYVIMQLSALIGIPLMYKFGYAGGHPTNANLTMAQGIYSVVSFFICLIIVLLILRTAPKQTLRNGKKASA
GMSVLWAVAGIWLALFSQGIAGMIEQYVFHVGSGSENTKAILSIIKAMPLMIIVSSIVGPILEEIIFRKIIFGVLYEKTN
FFIAGLISSVIFGIVHQDLTHLLLYTAMGFTFAFLYVQTKRIIVPIFAHVMMNTIVVVMQLGPAQKYIEQHSEQMQLIIG
GLFV

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U48 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003675 [H]

Pfam domain/function: PF02517 Abi [H]

EC number: NA

Molecular weight: Translated: 27189; Mature: 27189

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKQYWYIILTYVIMQLSALIGIPLMYKFGYAGGHPTNANLTMAQGIYSVVSFFICLIIV
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LLILRTAPKQTLRNGKKASAGMSVLWAVAGIWLALFSQGIAGMIEQYVFHVGSGSENTKA
HHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
ILSIIKAMPLMIIVSSIVGPILEEIIFRKIIFGVLYEKTNFFIAGLISSVIFGIVHQDLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLLLYTAMGFTFAFLYVQTKRIIVPIFAHVMMNTIVVVMQLGPAQKYIEQHSEQMQLIIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
GLFV
HHCC
>Mature Secondary Structure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HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]