Click here to switch to the map view.

The map label for this gene is ycnI [H]

Identifier: 154684888

GI number: 154684888

Start: 417440

End: 418051

Strand: Reverse

Name: ycnI [H]

Synonym: RBAM_004190

Alternate gene names: 154684888

Gene position: 418051-417440 (Counterclockwise)

Preceding gene: 154684889

Following gene: 154684883

Centisome position: 10.67

GC content: 51.96

Gene sequence:

>612_bases
ATGTTGAAAAAAAAGGCTTTATTATTCATATCCGCCGTGACCCTGTCACTCGTCGGTTTTACGGCGGCAGCAAGCGCCCA
CGTCTCAGTCAAACCCGCGGAATCCGCGGCCGGTTCTTGGGAAACGTACACGATGAAAGTGCCTGTGGAAAAGAATGAGC
CGACAACGAAAGTCGTGCTGAAAATGCCCGCCGGCGTTGAATTTCAGCAATATCAGCCGATTCCGGGATGGAAAACATCC
GTATCCAAACATGATGACAAAGCGGTCTCCGTCACTTGGGAAGCAAAGGACGGCGGCATCCAGCCCGGCCAATTCCAGCA
GTTCACGTTCGTTGCGAAAAATCCTGAAAAGAGCGGAGATGCCGCTTGGGACGCTTACCAATATTACAAAGACGGCAGCA
TTGTAGAATGGACGGGTGATGAGAAAGCCGACACGCCCCACTCGATTACGAAAATCACGAAATCGGCCAGCGTGACGGAT
GCGCACGGAGCTGAACAGTCAAACGAAGAAAGCAAATCCGGCGTATCAGCGCTTGATATTGCAGCCATCGTTCTGTCAGC
TGCGGCGATTATCCTTTCCATCGCGGCGCTTGTAAAGAAAAAACGCGCGTAA

Upstream 100 bases:

>100_bases
CACCGAAAAGGGAAACTGGAAGATCAAAGTCCACGGGCTGACAAACGATTTTAATGAAATCAACCAAATATTCTCAACGA
CAAACTAAGGAGTGTATCTC

Downstream 100 bases:

>100_bases
GCAAAAAGCGATCCGGCTCTAAAGAGCCTGCGATCGCTTTTTTTCTTATCCGCGGCCTGCCTGGAATGACGGATATTTGG
TCATTCCCCCGTCAGCAAAC

Product: YcnI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MLKKKALLFISAVTLSLVGFTAAASAHVSVKPAESAAGSWETYTMKVPVEKNEPTTKVVLKMPAGVEFQQYQPIPGWKTS
VSKHDDKAVSVTWEAKDGGIQPGQFQQFTFVAKNPEKSGDAAWDAYQYYKDGSIVEWTGDEKADTPHSITKITKSASVTD
AHGAEQSNEESKSGVSALDIAAIVLSAAAIILSIAALVKKKRA

Sequences:

>Translated_203_residues
MLKKKALLFISAVTLSLVGFTAAASAHVSVKPAESAAGSWETYTMKVPVEKNEPTTKVVLKMPAGVEFQQYQPIPGWKTS
VSKHDDKAVSVTWEAKDGGIQPGQFQQFTFVAKNPEKSGDAAWDAYQYYKDGSIVEWTGDEKADTPHSITKITKSASVTD
AHGAEQSNEESKSGVSALDIAAIVLSAAAIILSIAALVKKKRA
>Mature_203_residues
MLKKKALLFISAVTLSLVGFTAAASAHVSVKPAESAAGSWETYTMKVPVEKNEPTTKVVLKMPAGVEFQQYQPIPGWKTS
VSKHDDKAVSVTWEAKDGGIQPGQFQQFTFVAKNPEKSGDAAWDAYQYYKDGSIVEWTGDEKADTPHSITKITKSASVTD
AHGAEQSNEESKSGVSALDIAAIVLSAAAIILSIAALVKKKRA

Specific function: Unknown

COG id: COG4549

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Single-pass type I membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012533 [H]

Pfam domain/function: PF07987 DUF1775 [H]

EC number: NA

Molecular weight: Translated: 21700; Mature: 21700

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKKALLFISAVTLSLVGFTAAASAHVSVKPAESAAGSWETYTMKVPVEKNEPTTKVVL
CCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCEEEEE
KMPAGVEFQQYQPIPGWKTSVSKHDDKAVSVTWEAKDGGIQPGQFQQFTFVAKNPEKSGD
ECCCCCCHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCC
AAWDAYQYYKDGSIVEWTGDEKADTPHSITKITKSASVTDAHGAEQSNEESKSGVSALDI
CHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHH
AAIVLSAAAIILSIAALVKKKRA
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKKKALLFISAVTLSLVGFTAAASAHVSVKPAESAAGSWETYTMKVPVEKNEPTTKVVL
CCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCEEEEE
KMPAGVEFQQYQPIPGWKTSVSKHDDKAVSVTWEAKDGGIQPGQFQQFTFVAKNPEKSGD
ECCCCCCHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCC
AAWDAYQYYKDGSIVEWTGDEKADTPHSITKITKSASVTDAHGAEQSNEESKSGVSALDI
CHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHH
AAIVLSAAAIILSIAALVKKKRA
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]