| Definition | Bacillus amyloliquefaciens FZB42, complete genome. |
|---|---|
| Accession | NC_009725 |
| Length | 3,918,589 |
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The map label for this gene is ybfG [H]
Identifier: 154684734
GI number: 154684734
Start: 237154
End: 239328
Strand: Reverse
Name: ybfG [H]
Synonym: RBAM_002650
Alternate gene names: 154684734
Gene position: 239328-237154 (Counterclockwise)
Preceding gene: 154684744
Following gene: 154684733
Centisome position: 6.11
GC content: 45.98
Gene sequence:
>2175_bases ATGGACGAAATGGTCCTGGAAACACAACAATGGCTGAATGAGACGTACAAAGGCAGACACGGGTACAACAAAGTGCCGGA AAACGGAAAAACGGGCTGGGATACCATTTACGGTCTGACACGGGCGCTTCAAATTGAGCTTGGTATTTCAGAACCTGCCG ATAACTTCGGACCGACGACACAAAGATTGTTTAAGCCGTTGAAAAAGCAGGCTCCCGATTCTAAGCCGACAAACATGAAT TACATTCTGCAAGGGGCGCTGTGGTGTAAAGGTTTTAACCCCGGCGGATTTTCAGGCGTTTTCTATGAAAATACCGAAAG CGCTGTAAAAGAGTTTCAAAAAGCGGCCGGGCTCACTAAGCAAGACGGCATCGTCACGGCACTCATTATGAAAGCCTTGC TGGATATGAGCGCTTTTCGATTAGTAGCGGGAGGCGACAAAAGAATCCGCCAAATCCAGCAGAACCTGAACCGGGATTAC AATGACTACATCGGCTTGATGCCTTGTGACGGCTTATATGCCCGCGATACAAACAAGGCTCTCATTTATGCCCTGCAAAA AGAAGAAAGCATGAGCACAAGCGTCGCCAATGGATTTTTCGGAAACGGGACGACCAGCTTATGCCCTACCTTGACTCCCG GCGATTCACGGACAGGCTTTGTTTTGATTGTCCAATACGCGCTTTACTGTAATGGGGAAGCGTTTGATCCCGGTGAATTC GACGGAAAATACGGCGTCGGAGTTGTATCGGCAGTGAAAGCTTTTCAAAAGTTTATGTGCCTGCCGCAGACCGGTTATGC GGACATGCCGACGATTAAAGCTTTATTATCAAGCTCAGGCGACACAACGCGGGCTGCTTCAACTTGTGACACCGCTGCCA TTTTGACGGCAGATACGGCTAAAACTTTGCGTGAGAATGGCTATAAGATCGTGGGAAGATATCTGACCGGGAATGTGCGG ACAAGCAGCGGACTGACATCGAAAGCGTTAACGTCAAAAGAACTTTCCACGATTTTCAATGCCGGCTTAAGCGTGTTTCC GATTTATCAGGACGGCGGCTATGAATCTTCTTATTTTGTAAAAGATCAAGGAACGAGAGATGCGTACAGCGCTGCATCAG CCGCCCGAAGATTAGGTTTTCCGTCAGGAACGACCATTTACTTTGCGGTCGATTTCGATGCGTATGATTATGAAGTCACG GATAAAATCATTCCTTACTTCCAAGAAATCAAGTCAGCTTTTATGAAAATGCAGGCGTTCTCAACTGCGCCGAAATATGA AATCGGGGTATACGGACCGAGAAACATTTGTATCCGGACATCAGAAGCAGGTCTGACCAAATATAGCTTTACAGCTAACA TGTCGACCGGATTCAGCGGCAACCTCGGATACCCGATGCCGAAAAACTGGGCTTTTGATCAATTTTATGAAGGAACGATC GGAAGCGGAGCGGGAAAAGTCGCCATTGACAAAGACGGATACTCCGGAAAAGACTCGGGTGTAAGCAGCGTCCATCCGCC TTCTGATCCTGTGTATGATGCAAGACTGCGCACACTGACGGATATTTTAACAACCATTCCTGCTTTAGAAAATATATCGA ATCTTGCGAATGCCATGTTTGAATTCGACAAGACAGAAACCATTTATGCATCACCTGAAATGGATATTCTTTTATCTACT TCACTTTTGGCAACAGTGCCAAGCGAAGGTTCTCCCAACACAGTTACCATTACAAATGGCAAACCGGGAGCCTATATTAC CGGTCTGATGGGAGATTCACAAGTCTCTTTTACAGCATCACAAATTGATTCCTATCAAAACCTGCTTAACAGTCTGAGCT TGTCAGTCCGCAACGGTTATTTAGAAGTGTATGTCAATCCGGCTGCAGGATCGCTGAATATTCAATTTAAAATTTATACA CCTGATATTCCGGTCGGTGACAGTGCTACAACTGGACTAACAACTACCATTACATTTAAAATAAAACAAAAGAGCTTCAG GTTGCCGGATTCCGAAGAGGTGTACTCCCCGGATTGGGATTCTGTCGTGAATACCATGGCTATTGCAGGCGCAGGAATTA TTGTTATTGTAGGGATCGGTGCTTTAGTCGTTTTAGCACCTGAATTAGGAGGAGCTGCAGCCTTGTTCAGCACGGTTTTA TCACTATTTCTATAA
Upstream 100 bases:
>100_bases TAATGGGGCTCTCCTTGGATAAACCCCTGCACCCATGACAAACTGTCATACGTTTGCCACCTATGAATGAACGCACAATA CACATAATGGAGGGATTGCA
Downstream 100 bases:
>100_bases TTGAACAGGCAGCTCCTTGCTCCAGGAATGCTCAATGAGTATTCTTGGAGTTATTTCTAAAGGAGGATTCGCATGAAGAT TGATATGCAGACATACAAGG
Product: YbfG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 724; Mature: 724
Protein sequence:
>724_residues MDEMVLETQQWLNETYKGRHGYNKVPENGKTGWDTIYGLTRALQIELGISEPADNFGPTTQRLFKPLKKQAPDSKPTNMN YILQGALWCKGFNPGGFSGVFYENTESAVKEFQKAAGLTKQDGIVTALIMKALLDMSAFRLVAGGDKRIRQIQQNLNRDY NDYIGLMPCDGLYARDTNKALIYALQKEESMSTSVANGFFGNGTTSLCPTLTPGDSRTGFVLIVQYALYCNGEAFDPGEF DGKYGVGVVSAVKAFQKFMCLPQTGYADMPTIKALLSSSGDTTRAASTCDTAAILTADTAKTLRENGYKIVGRYLTGNVR TSSGLTSKALTSKELSTIFNAGLSVFPIYQDGGYESSYFVKDQGTRDAYSAASAARRLGFPSGTTIYFAVDFDAYDYEVT DKIIPYFQEIKSAFMKMQAFSTAPKYEIGVYGPRNICIRTSEAGLTKYSFTANMSTGFSGNLGYPMPKNWAFDQFYEGTI GSGAGKVAIDKDGYSGKDSGVSSVHPPSDPVYDARLRTLTDILTTIPALENISNLANAMFEFDKTETIYASPEMDILLST SLLATVPSEGSPNTVTITNGKPGAYITGLMGDSQVSFTASQIDSYQNLLNSLSLSVRNGYLEVYVNPAAGSLNIQFKIYT PDIPVGDSATTGLTTTITFKIKQKSFRLPDSEEVYSPDWDSVVNTMAIAGAGIIVIVGIGALVVLAPELGGAAALFSTVL SLFL
Sequences:
>Translated_724_residues MDEMVLETQQWLNETYKGRHGYNKVPENGKTGWDTIYGLTRALQIELGISEPADNFGPTTQRLFKPLKKQAPDSKPTNMN YILQGALWCKGFNPGGFSGVFYENTESAVKEFQKAAGLTKQDGIVTALIMKALLDMSAFRLVAGGDKRIRQIQQNLNRDY NDYIGLMPCDGLYARDTNKALIYALQKEESMSTSVANGFFGNGTTSLCPTLTPGDSRTGFVLIVQYALYCNGEAFDPGEF DGKYGVGVVSAVKAFQKFMCLPQTGYADMPTIKALLSSSGDTTRAASTCDTAAILTADTAKTLRENGYKIVGRYLTGNVR TSSGLTSKALTSKELSTIFNAGLSVFPIYQDGGYESSYFVKDQGTRDAYSAASAARRLGFPSGTTIYFAVDFDAYDYEVT DKIIPYFQEIKSAFMKMQAFSTAPKYEIGVYGPRNICIRTSEAGLTKYSFTANMSTGFSGNLGYPMPKNWAFDQFYEGTI GSGAGKVAIDKDGYSGKDSGVSSVHPPSDPVYDARLRTLTDILTTIPALENISNLANAMFEFDKTETIYASPEMDILLST SLLATVPSEGSPNTVTITNGKPGAYITGLMGDSQVSFTASQIDSYQNLLNSLSLSVRNGYLEVYVNPAAGSLNIQFKIYT PDIPVGDSATTGLTTTITFKIKQKSFRLPDSEEVYSPDWDSVVNTMAIAGAGIIVIVGIGALVVLAPELGGAAALFSTVL SLFL >Mature_724_residues MDEMVLETQQWLNETYKGRHGYNKVPENGKTGWDTIYGLTRALQIELGISEPADNFGPTTQRLFKPLKKQAPDSKPTNMN YILQGALWCKGFNPGGFSGVFYENTESAVKEFQKAAGLTKQDGIVTALIMKALLDMSAFRLVAGGDKRIRQIQQNLNRDY NDYIGLMPCDGLYARDTNKALIYALQKEESMSTSVANGFFGNGTTSLCPTLTPGDSRTGFVLIVQYALYCNGEAFDPGEF DGKYGVGVVSAVKAFQKFMCLPQTGYADMPTIKALLSSSGDTTRAASTCDTAAILTADTAKTLRENGYKIVGRYLTGNVR TSSGLTSKALTSKELSTIFNAGLSVFPIYQDGGYESSYFVKDQGTRDAYSAASAARRLGFPSGTTIYFAVDFDAYDYEVT DKIIPYFQEIKSAFMKMQAFSTAPKYEIGVYGPRNICIRTSEAGLTKYSFTANMSTGFSGNLGYPMPKNWAFDQFYEGTI GSGAGKVAIDKDGYSGKDSGVSSVHPPSDPVYDARLRTLTDILTTIPALENISNLANAMFEFDKTETIYASPEMDILLST SLLATVPSEGSPNTVTITNGKPGAYITGLMGDSQVSFTASQIDSYQNLLNSLSLSVRNGYLEVYVNPAAGSLNIQFKIYT PDIPVGDSATTGLTTTITFKIKQKSFRLPDSEEVYSPDWDSVVNTMAIAGAGIIVIVGIGALVVLAPELGGAAALFSTVL SLFL
Specific function: Unknown
COG id: COG3409
COG function: function code M; Putative peptidoglycan-binding domain-containing protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fadG family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015020 - InterPro: IPR017853 - InterPro: IPR002477 [H]
Pfam domain/function: PF08924 DUF1906; PF01471 PG_binding_1 [H]
EC number: NA
Molecular weight: Translated: 78263; Mature: 78263
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEMVLETQQWLNETYKGRHGYNKVPENGKTGWDTIYGLTRALQIELGISEPADNFGPTT CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHEEEEEEECCCCCCCCCCCCH QRLFKPLKKQAPDSKPTNMNYILQGALWCKGFNPGGFSGVFYENTESAVKEFQKAAGLTK HHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEECCHHHHHHHHHHHCCCCC QDGIVTALIMKALLDMSAFRLVAGGDKRIRQIQQNLNRDYNDYIGLMPCDGLYARDTNKA CCCHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCHHHCEECCCCCCCEECCCCCE LIYALQKEESMSTSVANGFFGNGTTSLCPTLTPGDSRTGFVLIVQYALYCNGEAFDPGEF EEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHCCCCCCCCCCC DGKYGVGVVSAVKAFQKFMCLPQTGYADMPTIKALLSSSGDTTRAASTCDTAAILTADTA CCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECHHH KTLRENGYKIVGRYLTGNVRTSSGLTSKALTSKELSTIFNAGLSVFPIYQDGGYESSYFV HHHHHCCCEEEEEEEECCEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEE KDQGTRDAYSAASAARRLGFPSGTTIYFAVDFDAYDYEVTDKIIPYFQEIKSAFMKMQAF ECCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHH STAPKYEIGVYGPRNICIRTSEAGLTKYSFTANMSTGFSGNLGYPMPKNWAFDQFYEGTI CCCCCEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCC GSGAGKVAIDKDGYSGKDSGVSSVHPPSDPVYDARLRTLTDILTTIPALENISNLANAMF CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EFDKTETIYASPEMDILLSTSLLATVPSEGSPNTVTITNGKPGAYITGLMGDSQVSFTAS HCCCCCEEEECCCCCEEEECHHEEECCCCCCCCEEEEECCCCCEEEEEECCCCCEEEEHH QIDSYQNLLNSLSLSVRNGYLEVYVNPAAGSLNIQFKIYTPDIPVGDSATTGLTTTITFK HHHHHHHHHHHHHHEEECCEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEEE IKQKSFRLPDSEEVYSPDWDSVVNTMAIAGAGIIVIVGIGALVVLAPELGGAAALFSTVL EECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCEEEEECCCCCCHHHHHHHHH SLFL HHHC >Mature Secondary Structure MDEMVLETQQWLNETYKGRHGYNKVPENGKTGWDTIYGLTRALQIELGISEPADNFGPTT CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHEEEEEEECCCCCCCCCCCCH QRLFKPLKKQAPDSKPTNMNYILQGALWCKGFNPGGFSGVFYENTESAVKEFQKAAGLTK HHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEECCHHHHHHHHHHHCCCCC QDGIVTALIMKALLDMSAFRLVAGGDKRIRQIQQNLNRDYNDYIGLMPCDGLYARDTNKA CCCHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCHHHCEECCCCCCCEECCCCCE LIYALQKEESMSTSVANGFFGNGTTSLCPTLTPGDSRTGFVLIVQYALYCNGEAFDPGEF EEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHCCCCCCCCCCC DGKYGVGVVSAVKAFQKFMCLPQTGYADMPTIKALLSSSGDTTRAASTCDTAAILTADTA CCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECHHH KTLRENGYKIVGRYLTGNVRTSSGLTSKALTSKELSTIFNAGLSVFPIYQDGGYESSYFV HHHHHCCCEEEEEEEECCEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEE KDQGTRDAYSAASAARRLGFPSGTTIYFAVDFDAYDYEVTDKIIPYFQEIKSAFMKMQAF ECCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHH STAPKYEIGVYGPRNICIRTSEAGLTKYSFTANMSTGFSGNLGYPMPKNWAFDQFYEGTI CCCCCEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCC GSGAGKVAIDKDGYSGKDSGVSSVHPPSDPVYDARLRTLTDILTTIPALENISNLANAMF CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EFDKTETIYASPEMDILLSTSLLATVPSEGSPNTVTITNGKPGAYITGLMGDSQVSFTAS HCCCCCEEEECCCCCEEEECHHEEECCCCCCCCEEEEECCCCCEEEEEECCCCCEEEEHH QIDSYQNLLNSLSLSVRNGYLEVYVNPAAGSLNIQFKIYTPDIPVGDSATTGLTTTITFK HHHHHHHHHHHHHHEEECCEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEEE IKQKSFRLPDSEEVYSPDWDSVVNTMAIAGAGIIVIVGIGALVVLAPELGGAAALFSTVL EECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCEEEEECCCCCCHHHHHHHHH SLFL HHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]