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The map label for this gene is ybfE [H]

Identifier: 154684733

GI number: 154684733

Start: 236656

End: 236982

Strand: Reverse

Name: ybfE [H]

Synonym: RBAM_002640

Alternate gene names: 154684733

Gene position: 236982-236656 (Counterclockwise)

Preceding gene: 154684734

Following gene: 154684732

Centisome position: 6.05

GC content: 38.53

Gene sequence:

>327_bases
ATGAAACAAGATTCGCTCACACTGAATCAAATGAAAATGTGTTTCACTGAACCGCCCCTCACCTTCCAACATACTGTCAA
AATCGTATGTACAGTTACATTCATCACGTTATATATCTTTTTTTTCAGCACTCATTTTAATGATTTGATTGAAATGGCTC
TGCAGATGGTTTTCGGCCTGGCCGGCCTTGTTTGGATTATTGCTGTATTTCCGTTTTCAAGAAAAATCCAAGTGTCTGAC
CGTTTCAGACAAAAATCTGAAAACACCCGTATCACCGGAATGATAGACTTTGTCCTCGAACAACGATACAAAGACATGAT
CAGTTAA

Upstream 100 bases:

>100_bases
CATGAAGATTGATATGCAGACATACAAGGAAACCGTTCAAAAAATAGAAACCGATTTGATTCCGCGAAGTCAAAATGACA
AAGAACTGCTTACATACTTA

Downstream 100 bases:

>100_bases
AAACCCCTCTGCTTAAGGGGTTTTTTTATTATGCAATCCCTTCACCCCCCTTATCAAAAAGGCTCTTCCCCTTTGGAAAT
AACCGGAACACCCAATTTCG

Product: YbfE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MKQDSLTLNQMKMCFTEPPLTFQHTVKIVCTVTFITLYIFFFSTHFNDLIEMALQMVFGLAGLVWIIAVFPFSRKIQVSD
RFRQKSENTRITGMIDFVLEQRYKDMIS

Sequences:

>Translated_108_residues
MKQDSLTLNQMKMCFTEPPLTFQHTVKIVCTVTFITLYIFFFSTHFNDLIEMALQMVFGLAGLVWIIAVFPFSRKIQVSD
RFRQKSENTRITGMIDFVLEQRYKDMIS
>Mature_108_residues
MKQDSLTLNQMKMCFTEPPLTFQHTVKIVCTVTFITLYIFFFSTHFNDLIEMALQMVFGLAGLVWIIAVFPFSRKIQVSD
RFRQKSENTRITGMIDFVLEQRYKDMIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12729; Mature: 12729

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQDSLTLNQMKMCFTEPPLTFQHTVKIVCTVTFITLYIFFFSTHFNDLIEMALQMVFGL
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLVWIIAVFPFSRKIQVSDRFRQKSENTRITGMIDFVLEQRYKDMIS
HHHHHHHHHHCCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKQDSLTLNQMKMCFTEPPLTFQHTVKIVCTVTFITLYIFFFSTHFNDLIEMALQMVFGL
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLVWIIAVFPFSRKIQVSDRFRQKSENTRITGMIDFVLEQRYKDMIS
HHHHHHHHHHCCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]