Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

Click here to switch to the map view.

The map label for this gene is 154248478

Identifier: 154248478

GI number: 154248478

Start: 5038945

End: 5039268

Strand: Reverse

Name: 154248478

Synonym: Xaut_4558

Alternate gene names: NA

Gene position: 5039268-5038945 (Counterclockwise)

Preceding gene: 154248479

Following gene: 154248477

Centisome position: 94.92

GC content: 71.3

Gene sequence:

>324_bases
ATGAGGCTGTTCATGCGCCGGCGCGGGGAGGCGGGACCCGCGCGCGATGCCGCCCGCGCCTTGGCGGACCTCGTGCGCGA
TACCCTCGCCCTCGAGCCTGAGGCGACCGTTTCCGTCTCCGAGATTTCGTGCGGCGACCCCGCCTGCGGTGGCTCCGAGA
CTGTGGTGCTGGTGATGCGGCCGGGTGAACGCACCCAGGCCGCAAAAGTGCTCATGCCCATGGCGCAGGTGACGCCGGAG
GCGCTGGTGGCGGCCCTGAAGCCGCTGATGGCCGGGGAGGCCGCGGTCTCCACCGGACTTTCGCCCCACGGCGAGAAGGT
CTAA

Upstream 100 bases:

>100_bases
CTCCAGCCCGAGGGGGAGGACGACGAGGCGTGAGACGCCGTCATGTTTGCGCCGCGAGGACGGTTCAAAACCCGCCGCGA
GATCCATCGAGGAGGCGGGG

Downstream 100 bases:

>100_bases
ACGGCCAGAGCGTTTTCCCCTTGCCGTGACCGTTCCATGTCCCTTCTTTCCTCCCCGTCCGCCCGCCCCGCCCGTTCGCT
CAATCCCCTGTATGCGGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MRLFMRRRGEAGPARDAARALADLVRDTLALEPEATVSVSEISCGDPACGGSETVVLVMRPGERTQAAKVLMPMAQVTPE
ALVAALKPLMAGEAAVSTGLSPHGEKV

Sequences:

>Translated_107_residues
MRLFMRRRGEAGPARDAARALADLVRDTLALEPEATVSVSEISCGDPACGGSETVVLVMRPGERTQAAKVLMPMAQVTPE
ALVAALKPLMAGEAAVSTGLSPHGEKV
>Mature_107_residues
MRLFMRRRGEAGPARDAARALADLVRDTLALEPEATVSVSEISCGDPACGGSETVVLVMRPGERTQAAKVLMPMAQVTPE
ALVAALKPLMAGEAAVSTGLSPHGEKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11112; Mature: 11112

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLFMRRRGEAGPARDAARALADLVRDTLALEPEATVSVSEISCGDPACGGSETVVLVMR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCEEEEEEC
PGERTQAAKVLMPMAQVTPEALVAALKPLMAGEAAVSTGLSPHGEKV
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRLFMRRRGEAGPARDAARALADLVRDTLALEPEATVSVSEISCGDPACGGSETVVLVMR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCEEEEEEC
PGERTQAAKVLMPMAQVTPEALVAALKPLMAGEAAVSTGLSPHGEKV
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA