| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154248341
Identifier: 154248341
GI number: 154248341
Start: 4903111
End: 4904736
Strand: Reverse
Name: 154248341
Synonym: Xaut_4421
Alternate gene names: NA
Gene position: 4904736-4903111 (Counterclockwise)
Preceding gene: 154248346
Following gene: 154248339
Centisome position: 92.39
GC content: 68.45
Gene sequence:
>1626_bases ATGCCTTCCTCCGTGCGGCTGCCCGTGGTGCTCGCGCTCGTGGTGGCCGGCCTCATCGCCGGCCTTTGGACCCTTCTCGG ACGGCCCGTGGCCATGCCACCCTCGCCGTTGGCACAGGGCGAGAAGCTGCCGTGCGTGTCCTATGCTCCGTTCCGCGACG GCCAGTCGCCGTTCCAGAAGGGGTTGGTGATATCGGAAGCCCAGATCGACGAGGATTTTGCCCGCCTCGCCAAGATCACC TCCTGCGTGCGCACCTATTCCATCGAGATGGGGCTGGACAAGGCGCCGGCCATCGCCCGCAAGCACGGCCTCACCATGCT GCTCGGCATCTGGCTGGGGCCGGACGTGGACCGCAACCGCGTCGAGCTCGACACCGGCATCCGCCTTGCCCAGGAAAATC AGGACGTGGTTAAGGCCGTGGTGGTGGGCAACGAGGTGCTGCTGCGCGGCGAGATGTCCGCCACCGAGTTGGCCAGTACC ATCGCCAGCGTGAAGCGGCAGGTGGCCCCGGTTCCGGTCACCTATGCCGACGTGTGGGAATTCTGGGAGCGCAACAAGGG TCTGACCGAGAACGTGGATTTCGTCACCATCCACATCCTGCCCTATTGGGAGGACCTGCCGGTATCCGCTTCCGAGGCCG GCCCCCATGTGGACGAGATCCGCCAGCGCATGGCTGAGGCCTTCCCCGGCAAGGAAATCCTGATCGGCGAGACCGGATGG CCGAGCGCCGGCCGCATGCGCGAGGAGGCGCTGCCCTCGCCCTCCAACCAGGCGCGGGTGATGCACGACGTGGTGGCGCT GGCCAAGCGCCAGGGCTATCGGGTCAACGTCATCGAGGCGTTCGACCAACCGTGGAAGCGCCGCAGCGAGGGCACCGTCG GCGGGCACTGGGGCATTATCGATGCCGATGCCCGCATGCCGAAATTCGCCTGGGGACAACCGGTGGAGGACTACCCCGGC TGGCGCATGCACATCGGCGTGGGCCTGGTGGTGGTGGCCGGCGTGTTTGCCAGCGCCTTCGCCGGCGGCCGCAAGCGTGA GGACGGGCTGCAGACGCGGGACTGGTTGGCCGTGGCAGGGATTGCGCTGTTCGGCGGCGCGACGCTTGGCGCCGCTCTTT CCGCCATGCCGCTGGAGAGCCTCGGCTTCTTCGGCTGGCTGAGGAATGGCCTGCTGTTTGCCGTGGCGGTCGCGAGCCTG ATCGTGATGCCGGCGGTGATCGGGCGGGGGCAGGGGCTGGCACCGTTCTCGGTGGCGCTGGATGCTCGCCGCTGGGCGGT GTCTTCGGGCGCGGCCATTGCCGCCGCTTTGATGCTGGCGCTCGCCGCTGTGGCCGTCGGGTCGGTGGCGTTCGAGCTGG TATTCGACCCGCGCTACAAGGATTTCCCGGTGTTTCCGCTCACCGCCATCGTGGCGGCGGTCGCCGCGCCCATGCTGGTG CGCCGGGCGGAGCGGGACGGGGCGGGCCTCGGCGAGGTCATCGCCACCTGGGGCCTGCTGGTGGCCGGCGTCTACGTGCC CCTGAACGAGACGCTCTCCAACTGGCAGGCGGCCTGGTTCGGCACGCTCTGCCTCATTCTTTCCTTCACGCTGTGGCGGG TCCAGGCCGTGCAAAGGAAAGGATGA
Upstream 100 bases:
>100_bases GGGGGTGCCGCAACGATGCCCGCGGCTGCGGGAAGGCTTCACACCGCCGGTGCAAGGCTCTATGTGGCGGCGGGGCCCTC TCGTCTCGTCTGGAGTTTCG
Downstream 100 bases:
>100_bases GCATCATCGCCGCCAGCGCGCCGGCCACCTCGTTGTGGAACACCAGCGCGAAGGCGGTGAACACCATCCCCACCGAGAAG GTGGCAAGGCCCGGCGCGAT
Product: putative beta (1-6) glucans synthase
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; Glycoside Hydrolase Family Protein; Beta Glucan Synthase; Glycosyl Hydrolase; Beta-(1-3)-Glucosyl Transferase; Glycosyltransferase; Exo-Beta-1 3-Glucanase-Like Protein; Family 2 Glycosyl Transferase; Glycoside Hydrolase; Glucan 1 3-Beta-Glucosidase; Glycosyl Transferase Group 2 Family Protein; Beta-(1-3)-Glucosyl Transferase NdvB-Like; Exo-Beta-1 3-Glucanase-Like; Glycosyl Transferase Family 2 Protein; Glycoside Hydrolase Family; Beta Glucans Synthase NdvC-Like; Glucans Synthase; Exo-Beta-1 3-Glucanase; Glycosyl Hydrolases Family; Glucosyl Transferase; Cellulose Synthase Catalytic Subunit
Number of amino acids: Translated: 541; Mature: 540
Protein sequence:
>541_residues MPSSVRLPVVLALVVAGLIAGLWTLLGRPVAMPPSPLAQGEKLPCVSYAPFRDGQSPFQKGLVISEAQIDEDFARLAKIT SCVRTYSIEMGLDKAPAIARKHGLTMLLGIWLGPDVDRNRVELDTGIRLAQENQDVVKAVVVGNEVLLRGEMSATELAST IASVKRQVAPVPVTYADVWEFWERNKGLTENVDFVTIHILPYWEDLPVSASEAGPHVDEIRQRMAEAFPGKEILIGETGW PSAGRMREEALPSPSNQARVMHDVVALAKRQGYRVNVIEAFDQPWKRRSEGTVGGHWGIIDADARMPKFAWGQPVEDYPG WRMHIGVGLVVVAGVFASAFAGGRKREDGLQTRDWLAVAGIALFGGATLGAALSAMPLESLGFFGWLRNGLLFAVAVASL IVMPAVIGRGQGLAPFSVALDARRWAVSSGAAIAAALMLALAAVAVGSVAFELVFDPRYKDFPVFPLTAIVAAVAAPMLV RRAERDGAGLGEVIATWGLLVAGVYVPLNETLSNWQAAWFGTLCLILSFTLWRVQAVQRKG
Sequences:
>Translated_541_residues MPSSVRLPVVLALVVAGLIAGLWTLLGRPVAMPPSPLAQGEKLPCVSYAPFRDGQSPFQKGLVISEAQIDEDFARLAKIT SCVRTYSIEMGLDKAPAIARKHGLTMLLGIWLGPDVDRNRVELDTGIRLAQENQDVVKAVVVGNEVLLRGEMSATELAST IASVKRQVAPVPVTYADVWEFWERNKGLTENVDFVTIHILPYWEDLPVSASEAGPHVDEIRQRMAEAFPGKEILIGETGW PSAGRMREEALPSPSNQARVMHDVVALAKRQGYRVNVIEAFDQPWKRRSEGTVGGHWGIIDADARMPKFAWGQPVEDYPG WRMHIGVGLVVVAGVFASAFAGGRKREDGLQTRDWLAVAGIALFGGATLGAALSAMPLESLGFFGWLRNGLLFAVAVASL IVMPAVIGRGQGLAPFSVALDARRWAVSSGAAIAAALMLALAAVAVGSVAFELVFDPRYKDFPVFPLTAIVAAVAAPMLV RRAERDGAGLGEVIATWGLLVAGVYVPLNETLSNWQAAWFGTLCLILSFTLWRVQAVQRKG >Mature_540_residues PSSVRLPVVLALVVAGLIAGLWTLLGRPVAMPPSPLAQGEKLPCVSYAPFRDGQSPFQKGLVISEAQIDEDFARLAKITS CVRTYSIEMGLDKAPAIARKHGLTMLLGIWLGPDVDRNRVELDTGIRLAQENQDVVKAVVVGNEVLLRGEMSATELASTI ASVKRQVAPVPVTYADVWEFWERNKGLTENVDFVTIHILPYWEDLPVSASEAGPHVDEIRQRMAEAFPGKEILIGETGWP SAGRMREEALPSPSNQARVMHDVVALAKRQGYRVNVIEAFDQPWKRRSEGTVGGHWGIIDADARMPKFAWGQPVEDYPGW RMHIGVGLVVVAGVFASAFAGGRKREDGLQTRDWLAVAGIALFGGATLGAALSAMPLESLGFFGWLRNGLLFAVAVASLI VMPAVIGRGQGLAPFSVALDARRWAVSSGAAIAAALMLALAAVAVGSVAFELVFDPRYKDFPVFPLTAIVAAVAAPMLVR RAERDGAGLGEVIATWGLLVAGVYVPLNETLSNWQAAWFGTLCLILSFTLWRVQAVQRKG
Specific function: Unknown
COG id: COG5309
COG function: function code G; Exo-beta-1,3-glucanase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6323964, Length=266, Percent_Identity=27.0676691729323, Blast_Score=87, Evalue=7e-18, Organism=Saccharomyces cerevisiae, GI6321721, Length=264, Percent_Identity=25.7575757575758, Blast_Score=83, Evalue=9e-17, Organism=Saccharomyces cerevisiae, GI6321410, Length=266, Percent_Identity=24.0601503759398, Blast_Score=66, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58298; Mature: 58167
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: PS00587 GLYCOSYL_HYDROL_F17
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSVRLPVVLALVVAGLIAGLWTLLGRPVAMPPSPLAQGEKLPCVSYAPFRDGQSPFQK CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHC GLVISEAQIDEDFARLAKITSCVRTYSIEMGLDKAPAIARKHGLTMLLGIWLGPDVDRNR CCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCEEEHHHCCCCCCCCE VELDTGIRLAQENQDVVKAVVVGNEVLLRGEMSATELASTIASVKRQVAPVPVTYADVWE EECCCCCEECCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH FWERNKGLTENVDFVTIHILPYWEDLPVSASEAGPHVDEIRQRMAEAFPGKEILIGETGW HHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCC PSAGRMREEALPSPSNQARVMHDVVALAKRQGYRVNVIEAFDQPWKRRSEGTVGGHWGII CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHCCHHHHCCCCCCCCCCCEE DADARMPKFAWGQPVEDYPGWRMHIGVGLVVVAGVFASAFAGGRKREDGLQTRDWLAVAG ECCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH IALFGGATLGAALSAMPLESLGFFGWLRNGLLFAVAVASLIVMPAVIGRGQGLAPFSVAL HHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH DARRWAVSSGAAIAAALMLALAAVAVGSVAFELVFDPRYKDFPVFPLTAIVAAVAAPMLV HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHH RRAERDGAGLGEVIATWGLLVAGVYVPLNETLSNWQAAWFGTLCLILSFTLWRVQAVQRK HHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC G C >Mature Secondary Structure PSSVRLPVVLALVVAGLIAGLWTLLGRPVAMPPSPLAQGEKLPCVSYAPFRDGQSPFQK CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHC GLVISEAQIDEDFARLAKITSCVRTYSIEMGLDKAPAIARKHGLTMLLGIWLGPDVDRNR CCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCEEEHHHCCCCCCCCE VELDTGIRLAQENQDVVKAVVVGNEVLLRGEMSATELASTIASVKRQVAPVPVTYADVWE EECCCCCEECCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH FWERNKGLTENVDFVTIHILPYWEDLPVSASEAGPHVDEIRQRMAEAFPGKEILIGETGW HHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCC PSAGRMREEALPSPSNQARVMHDVVALAKRQGYRVNVIEAFDQPWKRRSEGTVGGHWGII CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHCCHHHHCCCCCCCCCCCEE DADARMPKFAWGQPVEDYPGWRMHIGVGLVVVAGVFASAFAGGRKREDGLQTRDWLAVAG ECCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH IALFGGATLGAALSAMPLESLGFFGWLRNGLLFAVAVASLIVMPAVIGRGQGLAPFSVAL HHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH DARRWAVSSGAAIAAALMLALAAVAVGSVAFELVFDPRYKDFPVFPLTAIVAAVAAPMLV HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHH RRAERDGAGLGEVIATWGLLVAGVYVPLNETLSNWQAAWFGTLCLILSFTLWRVQAVQRK HHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA