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The map label for this gene is codA [H]

Identifier: 154247979

GI number: 154247979

Start: 4490998

End: 4492239

Strand: Reverse

Name: codA [H]

Synonym: Xaut_4058

Alternate gene names: 154247979

Gene position: 4492239-4490998 (Counterclockwise)

Preceding gene: 154247980

Following gene: 154247978

Centisome position: 84.62

GC content: 67.55

Gene sequence:

>1242_bases
ATGGACCTCATCGTCAAGAACGCCCGCCTGCCGGACGCGCCGGACCGTATCGTCGATATCGCCATCGCGGCTGGCCGCAT
TGAAGCCGTCGCACCCGACATCACTGCCGACGCCGAGGTGGTGGATGCCGGCGGCTGTCTGGTCGCCCCCGGCTTCGTGG
AAACCCACATCCACCTGGACAAATCCTGCATCCTCGATCGCTGCGCGTCACGCCGGGGCGACCTGGAGGAGGCCATCGCC
GAGGTGGCCCGCGCCAAGAAGGACTTCACCCCGCAGGATGTGTACGCCCGTGGCCGGCGCACCATCGAGAAGGCCATCGC
CCAGGGCACCACCCACATGCGCACCCATCTGGAGGTGGACCCCGGCATCGGCCTGCGCGGGTTCGAGGGGGTGATGCAGC
TGGTGGAGGATTATCGCTGGGCCATGGACATCGAGGTCTGCGTGTTCCCGCAGGAGGGCCTCACCAACAATCCCGGCACC
GACGAATTGATGGTGGAGGCGCTGCGGCGCGGGGCGAAGGCGGTGGGCGCGGCGCCCTATACCGACACCGACCCCCACGG
CCAGATCGACCGGGTGTTCGAGATGGCCCGCGACTTCGACGTGGACATCGACATGCATCTGGATTTCGGCGCCGATCCCA
CGGCGCTCGATCTCGACCATGTCTGCGCGCTCACCGAGCGCTTCGGCTGGGGCGGGCGGGTGGCCATCGGCCATGTCACC
AAGCTCGCCTATGTGGAACCCGAACGCCTGGCGGAGATCGCCACGCGCATGCGGGACGCCGGTGTCGCGCTTACCGTTCT
GCCCTCCACCGACCTGTTCCTGATGGGACGGGACCGCACCTCCGCCAAGACACGGGGCGTCACCCCGGCGCACCAGATGC
TGAAGCACGGGGTGAACTGCTCGCTGTCCACCAACAATGTGCTGAACCCCTTCACCCCGTTCGGCGACTGCTCGCAATTG
CGGATGGCGAACCTCAACGCCAACATCTGCCATGTGGGCTCGGCCCACGACATGGCCGAGTGCTTCCACATGGTCACGAG
CCGCCCCGCACGCCTGATGAATCTTGCCGACTACGGGCTGGAAGCCGGCAAGGCGGCGGATTTCGTCATCATCGACAGCC
CCTCCCCGCGCGATGCGGTGGCCGAGCTGTCGCCCGTGCTCGCCGCCTTCAAGGGTGGCCGGCGCACCCTGACGCGAGAG
CGGGCCAAGCTGCACTTTCCCGGCTGCGGGTGCGCCCAATGA

Upstream 100 bases:

>100_bases
TCGCCGAGATGGTCGAGACCGGAACCTGGCGCGCCAAGCTCAAGGCCGAGAAGGCCCGCGCCACCGTGAAGTGACCCCCG
CCAGCCCGTCGAGATGCCCC

Downstream 100 bases:

>100_bases
GCGCCGTCGAGGCGCTGGGCGCCTTCATTCCCGGCCCGCGCCTTGCCCGGCCGGGCGCGCCCGCCGGGCCGCTCGCCGGC
CTCACCTTCGCCGTGAAGGA

Product: amidohydrolase 3

Products: NA

Alternate protein names: Cytosine aminohydrolase [H]

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MDLIVKNARLPDAPDRIVDIAIAAGRIEAVAPDITADAEVVDAGGCLVAPGFVETHIHLDKSCILDRCASRRGDLEEAIA
EVARAKKDFTPQDVYARGRRTIEKAIAQGTTHMRTHLEVDPGIGLRGFEGVMQLVEDYRWAMDIEVCVFPQEGLTNNPGT
DELMVEALRRGAKAVGAAPYTDTDPHGQIDRVFEMARDFDVDIDMHLDFGADPTALDLDHVCALTERFGWGGRVAIGHVT
KLAYVEPERLAEIATRMRDAGVALTVLPSTDLFLMGRDRTSAKTRGVTPAHQMLKHGVNCSLSTNNVLNPFTPFGDCSQL
RMANLNANICHVGSAHDMAECFHMVTSRPARLMNLADYGLEAGKAADFVIIDSPSPRDAVAELSPVLAAFKGGRRTLTRE
RAKLHFPGCGCAQ

Sequences:

>Translated_413_residues
MDLIVKNARLPDAPDRIVDIAIAAGRIEAVAPDITADAEVVDAGGCLVAPGFVETHIHLDKSCILDRCASRRGDLEEAIA
EVARAKKDFTPQDVYARGRRTIEKAIAQGTTHMRTHLEVDPGIGLRGFEGVMQLVEDYRWAMDIEVCVFPQEGLTNNPGT
DELMVEALRRGAKAVGAAPYTDTDPHGQIDRVFEMARDFDVDIDMHLDFGADPTALDLDHVCALTERFGWGGRVAIGHVT
KLAYVEPERLAEIATRMRDAGVALTVLPSTDLFLMGRDRTSAKTRGVTPAHQMLKHGVNCSLSTNNVLNPFTPFGDCSQL
RMANLNANICHVGSAHDMAECFHMVTSRPARLMNLADYGLEAGKAADFVIIDSPSPRDAVAELSPVLAAFKGGRRTLTRE
RAKLHFPGCGCAQ
>Mature_413_residues
MDLIVKNARLPDAPDRIVDIAIAAGRIEAVAPDITADAEVVDAGGCLVAPGFVETHIHLDKSCILDRCASRRGDLEEAIA
EVARAKKDFTPQDVYARGRRTIEKAIAQGTTHMRTHLEVDPGIGLRGFEGVMQLVEDYRWAMDIEVCVFPQEGLTNNPGT
DELMVEALRRGAKAVGAAPYTDTDPHGQIDRVFEMARDFDVDIDMHLDFGADPTALDLDHVCALTERFGWGGRVAIGHVT
KLAYVEPERLAEIATRMRDAGVALTVLPSTDLFLMGRDRTSAKTRGVTPAHQMLKHGVNCSLSTNNVLNPFTPFGDCSQL
RMANLNANICHVGSAHDMAECFHMVTSRPARLMNLADYGLEAGKAADFVIIDSPSPRDAVAELSPVLAAFKGGRRTLTRE
RAKLHFPGCGCAQ

Specific function: Unknown

COG id: COG0402

COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786531, Length=408, Percent_Identity=29.4117647058824, Blast_Score=189, Evalue=2e-49,
Organism=Escherichia coli, GI1786517, Length=391, Percent_Identity=25.8312020460358, Blast_Score=113, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: =3.5.4.1 [H]

Molecular weight: Translated: 44865; Mature: 44865

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLIVKNARLPDAPDRIVDIAIAAGRIEAVAPDITADAEVVDAGGCLVAPGFVETHIHLD
CCEEECCCCCCCCCHHHEEEEHCCCCHHCCCCCCCCCCEEEECCCCEECCCCEEEEEECC
KSCILDRCASRRGDLEEAIAEVARAKKDFTPQDVYARGRRTIEKAIAQGTTHMRTHLEVD
HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHEEEEEEC
PGIGLRGFEGVMQLVEDYRWAMDIEVCVFPQEGLTNNPGTDELMVEALRRGAKAVGAAPY
CCCCCHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCHHHHCCCCC
TDTDPHGQIDRVFEMARDFDVDIDMHLDFGADPTALDLDHVCALTERFGWGGRVAIGHVT
CCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEHHHHH
KLAYVEPERLAEIATRMRDAGVALTVLPSTDLFLMGRDRTSAKTRGVTPAHQMLKHGVNC
HHEEECHHHHHHHHHHHHHCCEEEEEECCCCEEEEECCCCCCHHCCCCHHHHHHHCCCCC
SLSTNNVLNPFTPFGDCSQLRMANLNANICHVGSAHDMAECFHMVTSRPARLMNLADYGL
EECCCCCCCCCCCCCCCCHHEEECCCCCEEECCCHHHHHHHHHHHHCCCHHHHHHHHHCC
EAGKAADFVIIDSPSPRDAVAELSPVLAAFKGGRRTLTRERAKLHFPGCGCAQ
CCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHEEECCCCCCCC
>Mature Secondary Structure
MDLIVKNARLPDAPDRIVDIAIAAGRIEAVAPDITADAEVVDAGGCLVAPGFVETHIHLD
CCEEECCCCCCCCCHHHEEEEHCCCCHHCCCCCCCCCCEEEECCCCEECCCCEEEEEECC
KSCILDRCASRRGDLEEAIAEVARAKKDFTPQDVYARGRRTIEKAIAQGTTHMRTHLEVD
HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHEEEEEEC
PGIGLRGFEGVMQLVEDYRWAMDIEVCVFPQEGLTNNPGTDELMVEALRRGAKAVGAAPY
CCCCCHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCHHHHCCCCC
TDTDPHGQIDRVFEMARDFDVDIDMHLDFGADPTALDLDHVCALTERFGWGGRVAIGHVT
CCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEHHHHH
KLAYVEPERLAEIATRMRDAGVALTVLPSTDLFLMGRDRTSAKTRGVTPAHQMLKHGVNC
HHEEECHHHHHHHHHHHHHCCEEEEEECCCCEEEEECCCCCCHHCCCCHHHHHHHCCCCC
SLSTNNVLNPFTPFGDCSQLRMANLNANICHVGSAHDMAECFHMVTSRPARLMNLADYGL
EECCCCCCCCCCCCCCCCHHEEECCCCCEEECCCHHHHHHHHHHHHCCCHHHHHHHHHCC
EAGKAADFVIIDSPSPRDAVAELSPVLAAFKGGRRTLTRERAKLHFPGCGCAQ
CCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1640834; 8450832; 9278503 [H]