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The map label for this gene is rfbB [C]

Identifier: 154247474

GI number: 154247474

Start: 3958828

End: 3959061

Strand: Reverse

Name: rfbB [C]

Synonym: Xaut_3547

Alternate gene names: 154247474

Gene position: 3959061-3958828 (Counterclockwise)

Preceding gene: 154247475

Following gene: 154247473

Centisome position: 74.57

GC content: 68.38

Gene sequence:

>234_bases
ATGCGGGTTCTGGTGACCGGAGGAGCGGGCTTCATCGGCTCGGCGGTGGTGCGGCACCTGACCGGTGAAGGCCACCACGT
CCTCACCTTCGACAAGCTGACCTATGCGGGGGACCTCGCCGCCCCTGCTCCCCTCGACAACCGCGCAGGGTGGGTGCCCT
GGCGCCAGCGCGACCAGGGCCAGCGCCTTGGGCTCGAAAATCCGGCCTCATCCAAGCTGGGGGTTGTATCGTGA

Upstream 100 bases:

>100_bases
GATATTGCCTCGCCTCAAGGATTTCGACAGTCCCTTCGTGCATTCGAACGGATAGCCGCGCGCCTGAAGCAGGGGCAGAG
GCAATTGTGAAGGGAACGGC

Downstream 100 bases:

>100_bases
CCCGCATCCTCCTGTTTGGCGCCGGCGGCCAGCTCGGGCGCGAGGTAACGGCGCTCGCCGCCGAGCGCGGCCTTGATACG
GTCGGGCTTGGCCACGACGC

Product: dTDP-D-glucose 4 6-dehydratase-like protein

Products: dTDP-4-dehydro-6-deoxy-D-glucose; H2O [C]

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MRVLVTGGAGFIGSAVVRHLTGEGHHVLTFDKLTYAGDLAAPAPLDNRAGWVPWRQRDQGQRLGLENPASSKLGVVS

Sequences:

>Translated_77_residues
MRVLVTGGAGFIGSAVVRHLTGEGHHVLTFDKLTYAGDLAAPAPLDNRAGWVPWRQRDQGQRLGLENPASSKLGVVS
>Mature_77_residues
MRVLVTGGAGFIGSAVVRHLTGEGHHVLTFDKLTYAGDLAAPAPLDNRAGWVPWRQRDQGQRLGLENPASSKLGVVS

Specific function: DTDP-L-RHAMNOSE BIOSYNTHESIS WITHIN THE O ANTIGEN BIOSYNTHESIS PATHWAY OF LIPOPOLYSACCHARIDE BIOSYNTHESIS. [C]

COG id: COG1088

COG function: function code M; dTDP-D-glucose 4,6-dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 4.2.1.46 [C]

Molecular weight: Translated: 8177; Mature: 8177

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLVTGGAGFIGSAVVRHLTGEGHHVLTFDKLTYAGDLAAPAPLDNRAGWVPWRQRDQG
CEEEEECCCCHHHHHHHHHHCCCCCEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCC
QRLGLENPASSKLGVVS
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRVLVTGGAGFIGSAVVRHLTGEGHHVLTFDKLTYAGDLAAPAPLDNRAGWVPWRQRDQG
CEEEEECCCCHHHHHHHHHHCCCCCEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCC
QRLGLENPASSKLGVVS
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NAD+ [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): 0.019 {NAD+}} 0.034 {dTDPglucose}} [C]

Substrates: dTDPglucose [C]

Specific reaction: dTDPglucose --> dTDP-4-dehydro-6-deoxy-D-glucose + H2O [C]

General reaction: Elimination (of H2O C-O bond cleavage [C]

Inhibitor: TDP; TTP [C]

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA