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The map label for this gene is qseB [H]

Identifier: 154247327

GI number: 154247327

Start: 3786780

End: 3787451

Strand: Reverse

Name: qseB [H]

Synonym: Xaut_3399

Alternate gene names: 154247327

Gene position: 3787451-3786780 (Counterclockwise)

Preceding gene: 154247339

Following gene: 154247326

Centisome position: 71.34

GC content: 67.11

Gene sequence:

>672_bases
ATGCGGATTCTACTGGTCGAAGACGACCCTGTCCTCGGGATGGCCGTGCGCGACCAGATCGTCGCCGACGGGCATACGCC
CGACTGGGTGACCCGTCTGGACGACGCCACCGAGGCGATCCATGCCGCCGCCTTCGAGCTGGTCCTGCTCGACCTGATGC
TGCCGGACGGGCGAGGGCTGGATTTCCTGAAGCGCCTGAGAGTTGCGGGTGACGTCACGCCCGTCATCGTGCTGACGGCC
CGGGACCAGATCTCCGACCGCATCGCGGCGCTCGATGCCGGCGCCGACGACTACCTGGTCAAGCCGTTCGATCTGTTCGA
GCTCAGCGCGCGGATCCGGGCGGTGGGGCGGCGTTATGCCGGCAATCCCAATCCGCTGGTGTCGTTCGGCGATATCGAGG
TGGATCTGGCCGCCCGCTCGGTGTGGCGGGCGGGGCGGCCGGTGGTGCTGACCGGTCGCGAATGGTCGCTGTTCGAGGCC
TTCGTCCAACGTCCCCACCAGCTCATGTCGAAGCCACAGCTCGAGGAGCGGCTCTATTCCTTCGATGCCGAGGTGGAGAG
CAACACCATCGAGGTCTATGTCGGGCGCCTGCGCAAGAAGCTGGGAGCGCAGGTGATCGAGACTGTGCGCGGCATGGGCT
ATCGCCTCGGTGCGCCGGAGGTGCGTGCGTGA

Upstream 100 bases:

>100_bases
ACACGCCGAACTGACACCCACCTGAACGCCCGCCGGAATTATGGCGCCCCACCGGCGTGGCCGCCGCGCTAAACTGGCAG
GGAACACGCCGGGGCGACAC

Downstream 100 bases:

>100_bases
GCGGGCCGCGCCAGCCCGGCCGGTGGAGCCTGCGCCGACGCCTCGGGCTGGGGCTCGCGGGGGCGATGGCGGCGCTGTGG
CTGGCCGCGGCCACGGTGGC

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MRILLVEDDPVLGMAVRDQIVADGHTPDWVTRLDDATEAIHAAAFELVLLDLMLPDGRGLDFLKRLRVAGDVTPVIVLTA
RDQISDRIAALDAGADDYLVKPFDLFELSARIRAVGRRYAGNPNPLVSFGDIEVDLAARSVWRAGRPVVLTGREWSLFEA
FVQRPHQLMSKPQLEERLYSFDAEVESNTIEVYVGRLRKKLGAQVIETVRGMGYRLGAPEVRA

Sequences:

>Translated_223_residues
MRILLVEDDPVLGMAVRDQIVADGHTPDWVTRLDDATEAIHAAAFELVLLDLMLPDGRGLDFLKRLRVAGDVTPVIVLTA
RDQISDRIAALDAGADDYLVKPFDLFELSARIRAVGRRYAGNPNPLVSFGDIEVDLAARSVWRAGRPVVLTGREWSLFEA
FVQRPHQLMSKPQLEERLYSFDAEVESNTIEVYVGRLRKKLGAQVIETVRGMGYRLGAPEVRA
>Mature_223_residues
MRILLVEDDPVLGMAVRDQIVADGHTPDWVTRLDDATEAIHAAAFELVLLDLMLPDGRGLDFLKRLRVAGDVTPVIVLTA
RDQISDRIAALDAGADDYLVKPFDLFELSARIRAVGRRYAGNPNPLVSFGDIEVDLAARSVWRAGRPVVLTGREWSLFEA
FVQRPHQLMSKPQLEERLYSFDAEVESNTIEVYVGRLRKKLGAQVIETVRGMGYRLGAPEVRA

Specific function: Member of a two-component regulatory system qseB/qseC [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=217, Percent_Identity=41.0138248847926, Blast_Score=175, Evalue=2e-45,
Organism=Escherichia coli, GI1790552, Length=220, Percent_Identity=41.3636363636364, Blast_Score=167, Evalue=5e-43,
Organism=Escherichia coli, GI1787375, Length=225, Percent_Identity=38.6666666666667, Blast_Score=136, Evalue=1e-33,
Organism=Escherichia coli, GI1786911, Length=223, Percent_Identity=38.5650224215247, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1786784, Length=228, Percent_Identity=34.6491228070175, Blast_Score=131, Evalue=3e-32,
Organism=Escherichia coli, GI87082012, Length=222, Percent_Identity=34.2342342342342, Blast_Score=120, Evalue=7e-29,
Organism=Escherichia coli, GI1786599, Length=225, Percent_Identity=33.7777777777778, Blast_Score=119, Evalue=1e-28,
Organism=Escherichia coli, GI1789809, Length=225, Percent_Identity=33.3333333333333, Blast_Score=117, Evalue=7e-28,
Organism=Escherichia coli, GI1788394, Length=231, Percent_Identity=32.4675324675325, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1787229, Length=224, Percent_Identity=31.6964285714286, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1790860, Length=178, Percent_Identity=32.5842696629214, Blast_Score=97, Evalue=8e-22,
Organism=Escherichia coli, GI2367329, Length=233, Percent_Identity=33.0472103004292, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1790863, Length=229, Percent_Identity=27.0742358078603, Blast_Score=80, Evalue=8e-17,
Organism=Escherichia coli, GI145693140, Length=235, Percent_Identity=27.6595744680851, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 24850; Mature: 24850

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILLVEDDPVLGMAVRDQIVADGHTPDWVTRLDDATEAIHAAAFELVLLDLMLPDGRGL
CEEEEECCCCEECHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
DFLKRLRVAGDVTPVIVLTARDQISDRIAALDAGADDYLVKPFDLFELSARIRAVGRRYA
HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHC
GNPNPLVSFGDIEVDLAARSVWRAGRPVVLTGREWSLFEAFVQRPHQLMSKPQLEERLYS
CCCCCEEEECCEEEHHHHHHHHHCCCCEEEECCCHHHHHHHHHCHHHHHCCCCHHHHHHH
FDAEVESNTIEVYVGRLRKKLGAQVIETVRGMGYRLGAPEVRA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCC
>Mature Secondary Structure
MRILLVEDDPVLGMAVRDQIVADGHTPDWVTRLDDATEAIHAAAFELVLLDLMLPDGRGL
CEEEEECCCCEECHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
DFLKRLRVAGDVTPVIVLTARDQISDRIAALDAGADDYLVKPFDLFELSARIRAVGRRYA
HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHC
GNPNPLVSFGDIEVDLAARSVWRAGRPVVLTGREWSLFEAFVQRPHQLMSKPQLEERLYS
CCCCCEEEECCEEEHHHHHHHHHCCCCEEEECCCHHHHHHHHHCHHHHHCCCCHHHHHHH
FDAEVESNTIEVYVGRLRKKLGAQVIETVRGMGYRLGAPEVRA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]