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The map label for this gene is qseC [H]

Identifier: 154247326

GI number: 154247326

Start: 3785428

End: 3786783

Strand: Reverse

Name: qseC [H]

Synonym: Xaut_3398

Alternate gene names: 154247326

Gene position: 3786783-3785428 (Counterclockwise)

Preceding gene: 154247327

Following gene: 154247325

Centisome position: 71.33

GC content: 73.82

Gene sequence:

>1356_bases
GTGAGCGGGCCGCGCCAGCCCGGCCGGTGGAGCCTGCGCCGACGCCTCGGGCTGGGGCTCGCGGGGGCGATGGCGGCGCT
GTGGCTGGCCGCGGCCACGGTGGCAGGCCTAGTGCTGCAGCACGAGATCGGCGAGGTGTTCGACAGCGCGTTGCAGGAAG
TGGCGCAGCGGGTGCTGCCCCTGGCCTATTCCGAGCTGCTCTCCCGCGAGGCCGGGGACACGCCCCAGCACATGGCGCCC
ATCGGACCCCACCGGGAATACATCACCTATGTGGTGCGCGACGGCGCGGGCCGCGTGCTGCTCCAGTCCAGTGACGCCGA
GCTCATGGCGATTCCGGCGGGCCTTGCCCCTGGCTTCCACAGCACCGACCGGCTGCGCACCTACACCGAGGCGGCGGTAA
GCGGCACCATCGTGGTCACCACGGCGGAGGATCTCGGGCACCGCGCCGCGGCGGTGCGACGGGCCGTGGCGGCGCTGATC
TGGCCTCTCGGCGCGCTGGTGCCCATCGCGCTCGCCGGTGTCTGGCTTTCGGTCCGGCTGTCGCTCAAGCCGGTGCTCGC
CTTCCGCCGCGCCATCGAGGCGCGCGGGCACGGCAATCTCACGCCCGTGGCAACGGCGGGATTGCCGGAGGAGGTTGCGC
CCGTCGCGGCCGCGGTGAACGCGCTGCTGGACCGCCTGCGCGGAGCGCTCGATGCGGAGCGTGGCTTCACCGCCAACAGT
GCCCACGAGTTGCGCACCCCCATCGCCGCGGCGCTGGCCCAGACCCAGCGCCTCATGGTCGAGCTGCCCGAAGGTCCGGA
GCAGGACCGCGCGCACGCCATCGCGGGCGCCCTGCGCCGGCTCTCGCGCCTGTCCGAAAAGCTGCTGCAGCTTGCCAAGG
CCGAGGGGGGCGGCCTCGTCGCCGAGGTGCCCGCGCCGCTCGCGCCAGTGCTGCGCCACGTGGTCTCGGATATTGACCGC
CAGACCGGCCGCGGCACCGACATCGCCCTGTCTATCCCGGCGAACGGCGGCCCGCTGTCCGATCTCGATCCGGACGCCTT
CGCCATCCTCGCGCGCAACCTCATCGAGAACGCGCTGAAGCACGGCAAGCCCGAGACTCCGGTGGAGGTGCGGCTGGACG
ACGGCCTGTTCGAGGTCGCAAATTGCGGCCCCGTTGTGCCGGCAGACGTTCTGGCGGGCCTCGTGCGCCCGTTCCAGCGC
GGCCCCACGGGCGCGGAAGGTTCCGGCCTCGGCCTCGCCATCGCCGCCGCCATCTGCCGCGGCGCGGGCCTCACCCTCGA
CCTTGCCTCGCCGATCCCGGGCGCGGCGGACGGCTTCCGCGCCACGGTCCGCTTCCCCGCCGCGCCGCGATCCTGA

Upstream 100 bases:

>100_bases
TCGAGGTCTATGTCGGGCGCCTGCGCAAGAAGCTGGGAGCGCAGGTGATCGAGACTGTGCGCGGCATGGGCTATCGCCTC
GGTGCGCCGGAGGTGCGTGC

Downstream 100 bases:

>100_bases
CGGGAAGCTGAACGCAGATCCGCATCCGCTTCAGGTCGCCGTCAGATGGGGACGCAAGGGTACTCCCGGTCAACACCCGC
CGGGAGGCCCCCATGAAGCC

Product: integral membrane sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 451; Mature: 450

Protein sequence:

>451_residues
MSGPRQPGRWSLRRRLGLGLAGAMAALWLAAATVAGLVLQHEIGEVFDSALQEVAQRVLPLAYSELLSREAGDTPQHMAP
IGPHREYITYVVRDGAGRVLLQSSDAELMAIPAGLAPGFHSTDRLRTYTEAAVSGTIVVTTAEDLGHRAAAVRRAVAALI
WPLGALVPIALAGVWLSVRLSLKPVLAFRRAIEARGHGNLTPVATAGLPEEVAPVAAAVNALLDRLRGALDAERGFTANS
AHELRTPIAAALAQTQRLMVELPEGPEQDRAHAIAGALRRLSRLSEKLLQLAKAEGGGLVAEVPAPLAPVLRHVVSDIDR
QTGRGTDIALSIPANGGPLSDLDPDAFAILARNLIENALKHGKPETPVEVRLDDGLFEVANCGPVVPADVLAGLVRPFQR
GPTGAEGSGLGLAIAAAICRGAGLTLDLASPIPGAADGFRATVRFPAAPRS

Sequences:

>Translated_451_residues
MSGPRQPGRWSLRRRLGLGLAGAMAALWLAAATVAGLVLQHEIGEVFDSALQEVAQRVLPLAYSELLSREAGDTPQHMAP
IGPHREYITYVVRDGAGRVLLQSSDAELMAIPAGLAPGFHSTDRLRTYTEAAVSGTIVVTTAEDLGHRAAAVRRAVAALI
WPLGALVPIALAGVWLSVRLSLKPVLAFRRAIEARGHGNLTPVATAGLPEEVAPVAAAVNALLDRLRGALDAERGFTANS
AHELRTPIAAALAQTQRLMVELPEGPEQDRAHAIAGALRRLSRLSEKLLQLAKAEGGGLVAEVPAPLAPVLRHVVSDIDR
QTGRGTDIALSIPANGGPLSDLDPDAFAILARNLIENALKHGKPETPVEVRLDDGLFEVANCGPVVPADVLAGLVRPFQR
GPTGAEGSGLGLAIAAAICRGAGLTLDLASPIPGAADGFRATVRFPAAPRS
>Mature_450_residues
SGPRQPGRWSLRRRLGLGLAGAMAALWLAAATVAGLVLQHEIGEVFDSALQEVAQRVLPLAYSELLSREAGDTPQHMAPI
GPHREYITYVVRDGAGRVLLQSSDAELMAIPAGLAPGFHSTDRLRTYTEAAVSGTIVVTTAEDLGHRAAAVRRAVAALIW
PLGALVPIALAGVWLSVRLSLKPVLAFRRAIEARGHGNLTPVATAGLPEEVAPVAAAVNALLDRLRGALDAERGFTANSA
HELRTPIAAALAQTQRLMVELPEGPEQDRAHAIAGALRRLSRLSEKLLQLAKAEGGGLVAEVPAPLAPVLRHVVSDIDRQ
TGRGTDIALSIPANGGPLSDLDPDAFAILARNLIENALKHGKPETPVEVRLDDGLFEVANCGPVVPADVLAGLVRPFQRG
PTGAEGSGLGLAIAAAICRGAGLTLDLASPIPGAADGFRATVRFPAAPRS

Specific function: Member of a two-component regulatory system qseB/qseC. May activate qseB by phosphorylation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789403, Length=451, Percent_Identity=27.0509977827051, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI1790551, Length=286, Percent_Identity=31.1188811188811, Blast_Score=102, Evalue=6e-23,
Organism=Escherichia coli, GI87082128, Length=285, Percent_Identity=28.7719298245614, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI1787374, Length=272, Percent_Identity=25.3676470588235, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 47005; Mature: 46873

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN ; PS00218 AMINO_ACID_PERMEASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGPRQPGRWSLRRRLGLGLAGAMAALWLAAATVAGLVLQHEIGEVFDSALQEVAQRVLP
CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAYSELLSREAGDTPQHMAPIGPHREYITYVVRDGAGRVLLQSSDAELMAIPAGLAPGFH
HHHHHHHHHCCCCCCHHCCCCCCCHHHEEEEEECCCCEEEEECCCCCEEEECCCCCCCCC
STDRLRTYTEAAVSGTIVVTTAEDLGHRAAAVRRAVAALIWPLGALVPIALAGVWLSVRL
CHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLKPVLAFRRAIEARGHGNLTPVATAGLPEEVAPVAAAVNALLDRLRGALDAERGFTANS
HHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
AHELRTPIAAALAQTQRLMVELPEGPEQDRAHAIAGALRRLSRLSEKLLQLAKAEGGGLV
HHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
AEVPAPLAPVLRHVVSDIDRQTGRGTDIALSIPANGGPLSDLDPDAFAILARNLIENALK
EECCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH
HGKPETPVEVRLDDGLFEVANCGPVVPADVLAGLVRPFQRGPTGAEGSGLGLAIAAAICR
CCCCCCCEEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
GAGLTLDLASPIPGAADGFRATVRFPAAPRS
CCCCEEECCCCCCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure 
SGPRQPGRWSLRRRLGLGLAGAMAALWLAAATVAGLVLQHEIGEVFDSALQEVAQRVLP
CCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAYSELLSREAGDTPQHMAPIGPHREYITYVVRDGAGRVLLQSSDAELMAIPAGLAPGFH
HHHHHHHHHCCCCCCHHCCCCCCCHHHEEEEEECCCCEEEEECCCCCEEEECCCCCCCCC
STDRLRTYTEAAVSGTIVVTTAEDLGHRAAAVRRAVAALIWPLGALVPIALAGVWLSVRL
CHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLKPVLAFRRAIEARGHGNLTPVATAGLPEEVAPVAAAVNALLDRLRGALDAERGFTANS
HHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
AHELRTPIAAALAQTQRLMVELPEGPEQDRAHAIAGALRRLSRLSEKLLQLAKAEGGGLV
HHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
AEVPAPLAPVLRHVVSDIDRQTGRGTDIALSIPANGGPLSDLDPDAFAILARNLIENALK
EECCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH
HGKPETPVEVRLDDGLFEVANCGPVVPADVLAGLVRPFQRGPTGAEGSGLGLAIAAAICR
CCCCCCCEEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
GAGLTLDLASPIPGAADGFRATVRFPAAPRS
CCCCEEECCCCCCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]