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The map label for this gene is glyQ

Identifier: 154247258

GI number: 154247258

Start: 3704423

End: 3705355

Strand: Reverse

Name: glyQ

Synonym: Xaut_3330

Alternate gene names: 154247258

Gene position: 3705355-3704423 (Counterclockwise)

Preceding gene: 154247259

Following gene: 154247257

Centisome position: 69.79

GC content: 66.56

Gene sequence:

>933_bases
ATGATGATTGATCCCGCCCTTCCCGCCCACATGCGGCCCGACCGTTCCTTCCAGGCCCTGCTGCTGACCCTTCAGCGCTT
CTGGGCGGACCAGGGCTGCGTGGTCCTCCAGCCCTACGACATGGAAGTGGGCGCCGGCACCTTCCATCCCGCCACCACCT
TGCGCGCGCTGGGGCCGAAGCCCTGGAAGGCGGCCTATGTGCAGCCCTCCCGCCGCCCCAAGGATGGCCGCTATGGCGAG
AACCCCAACCGCCTCCAGCATTATTACCAGTTCCAGGTGATCCTGAAGCCGTCGCCGGACAACCTCCAGGAGCTGTACCT
CAAGTCACTCCAGGCCATCGGCGTGGACCTCGGCCTGCACGACGTGCGCTTCGTGGAGGACGACTGGGAGAGTCCGACGC
TGGGCGCCTGGGGCCTCGGCTGGGAATGCTGGTGCGACGGCATGGAGGTGTCGCAGTTCACCTACTTCCAGCAGGTGGCC
GGCATCGAGTGCGCCCCCGTCTCCGGCGAGCTGACCTACGGGCTGGAGCGCCTCGCCATGTATGTGCAGGGGGTGGAGAA
CGTCTACGACCTCAATTTCAACGGCCGCGACGGGGCTGAGAAGATCAGCTACGGCGACGTATTCCACCAGGCCGAACAGG
AATATTCCCGGCACAATTTCGAGGCCGCGGACACCGAGATGCTGCTGGAGCAGTTCCGCATGGCCGAGAAGGCCTGCCAC
AAGTACCTCGCCTTCGGCGACAAGGGCGAACGCCACGAAATGGCGCTGCCGGCCTACGACCAGTGCATCAAGGCCTCCCA
CGTCTTCAACCTGCTCGACGCGCGCGGCGTGATCTCGGTGACCGAGCGGCAGAGCTACATCCTGCGGGTGCGCGAGCTGG
CGAAGGCCTGCGGCGCCGCCTGGCTCAAGACGGCGGCCGGCGGGGCGGCCTGA

Upstream 100 bases:

>100_bases
CGCCTCTCTAGTGTCCCGCGCGCCTGCGGCGCTGCCGCCCGGCCGGCCCACGAACGGGACGACCGGGCCGCACAGCCGCC
GGAAATGGCCCAGCGAGCAC

Downstream 100 bases:

>100_bases
GCGCCCCTCCCCCGCTTCCGGCCCCCTTCATCGCCTTGCGCGACCCAGATTGATCAAGACTGATCCCATGCCCGACCTTC
TCATTGAACTCTTCTCCGAG

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS [H]

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MMIDPALPAHMRPDRSFQALLLTLQRFWADQGCVVLQPYDMEVGAGTFHPATTLRALGPKPWKAAYVQPSRRPKDGRYGE
NPNRLQHYYQFQVILKPSPDNLQELYLKSLQAIGVDLGLHDVRFVEDDWESPTLGAWGLGWECWCDGMEVSQFTYFQQVA
GIECAPVSGELTYGLERLAMYVQGVENVYDLNFNGRDGAEKISYGDVFHQAEQEYSRHNFEAADTEMLLEQFRMAEKACH
KYLAFGDKGERHEMALPAYDQCIKASHVFNLLDARGVISVTERQSYILRVRELAKACGAAWLKTAAGGAA

Sequences:

>Translated_310_residues
MMIDPALPAHMRPDRSFQALLLTLQRFWADQGCVVLQPYDMEVGAGTFHPATTLRALGPKPWKAAYVQPSRRPKDGRYGE
NPNRLQHYYQFQVILKPSPDNLQELYLKSLQAIGVDLGLHDVRFVEDDWESPTLGAWGLGWECWCDGMEVSQFTYFQQVA
GIECAPVSGELTYGLERLAMYVQGVENVYDLNFNGRDGAEKISYGDVFHQAEQEYSRHNFEAADTEMLLEQFRMAEKACH
KYLAFGDKGERHEMALPAYDQCIKASHVFNLLDARGVISVTERQSYILRVRELAKACGAAWLKTAAGGAA
>Mature_310_residues
MMIDPALPAHMRPDRSFQALLLTLQRFWADQGCVVLQPYDMEVGAGTFHPATTLRALGPKPWKAAYVQPSRRPKDGRYGE
NPNRLQHYYQFQVILKPSPDNLQELYLKSLQAIGVDLGLHDVRFVEDDWESPTLGAWGLGWECWCDGMEVSQFTYFQQVA
GIECAPVSGELTYGLERLAMYVQGVENVYDLNFNGRDGAEKISYGDVFHQAEQEYSRHNFEAADTEMLLEQFRMAEKACH
KYLAFGDKGERHEMALPAYDQCIKASHVFNLLDARGVISVTERQSYILRVRELAKACGAAWLKTAAGGAA

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Escherichia coli, GI1789983, Length=288, Percent_Identity=64.9305555555556, Blast_Score=392, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006194
- InterPro:   IPR002310 [H]

Pfam domain/function: PF02091 tRNA-synt_2e [H]

EC number: =6.1.1.14 [H]

Molecular weight: Translated: 35010; Mature: 35010

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIDPALPAHMRPDRSFQALLLTLQRFWADQGCVVLQPYDMEVGAGTFHPATTLRALGPK
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHCCCC
PWKAAYVQPSRRPKDGRYGENPNRLQHYYQFQVILKPSPDNLQELYLKSLQAIGVDLGLH
CCCEEECCCCCCCCCCCCCCCHHHHHEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCC
DVRFVEDDWESPTLGAWGLGWECWCDGMEVSQFTYFQQVAGIECAPVSGELTYGLERLAM
CEEEECCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCEECCCCCHHHHHHHHHHH
YVQGVENVYDLNFNGRDGAEKISYGDVFHQAEQEYSRHNFEAADTEMLLEQFRMAEKACH
HHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
KYLAFGDKGERHEMALPAYDQCIKASHVFNLLDARGVISVTERQSYILRVRELAKACGAA
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHH
WLKTAAGGAA
HHHHCCCCCC
>Mature Secondary Structure
MMIDPALPAHMRPDRSFQALLLTLQRFWADQGCVVLQPYDMEVGAGTFHPATTLRALGPK
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHCCCC
PWKAAYVQPSRRPKDGRYGENPNRLQHYYQFQVILKPSPDNLQELYLKSLQAIGVDLGLH
CCCEEECCCCCCCCCCCCCCCHHHHHEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCC
DVRFVEDDWESPTLGAWGLGWECWCDGMEVSQFTYFQQVAGIECAPVSGELTYGLERLAM
CEEEECCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCEECCCCCHHHHHHHHHHH
YVQGVENVYDLNFNGRDGAEKISYGDVFHQAEQEYSRHNFEAADTEMLLEQFRMAEKACH
HHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
KYLAFGDKGERHEMALPAYDQCIKASHVFNLLDARGVISVTERQSYILRVRELAKACGAA
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHH
WLKTAAGGAA
HHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]