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The map label for this gene is greA [C]

Identifier: 154246865

GI number: 154246865

Start: 3254499

End: 3254975

Strand: Direct

Name: greA [C]

Synonym: Xaut_2930

Alternate gene names: 154246865

Gene position: 3254499-3254975 (Clockwise)

Preceding gene: 154246862

Following gene: 154246866

Centisome position: 61.3

GC content: 68.97

Gene sequence:

>477_bases
ATGTCCGTCGCCTTTACGCGCGAAAACGACCTCGAAGCGACCGCCGCCGACCTGCCGGACCGGCCGATCTCGCCGCATCC
CAATCTGGTGACCCCCACCGGGATGGCGGCGCTGGATGCGGCCCTCGGCGAGGCCCGGGCCGCCTATGCGCTGGCGCAGA
TGGGTGACGTGCAGGCCGACCGGATGGCCATGGCGCGCGCGACCCGCGACCTGCGCTACTACAGCGCCCGCCGGGCCAGC
GCCCAACTCATTGAAGCTGTTGCTCATCCTCAGTCGGTCCAGTTCGGAGCCACCGTCACCATCTCTCGCGAGGATGGCCG
CCGCCAGGTCTTTCGCATCGTCGGCGAGGACGAGGCCGACCCGGCCAAGGGTTCGGTGTCCTATGTCTCGCCGCTGGCGA
AAGCCCTGATGAGCAAGGTCGTGGGGGATGTGGCTCTGGTGGCCGGCCGCGAGGTGGAGGTGCTGGAGATCGCTTGA

Upstream 100 bases:

>100_bases
CGGTTCACTGAAGCGATGGGAGACAGTTGGGGCAAACGGGCGACTTTGCGGGTCCCGCGTTGTATGTTCGTGGGTCTTGC
CACTCTGGATCCCGTTCAGC

Downstream 100 bases:

>100_bases
GGGCGCATGTTCAGCAGCGCACCGTGAATTTCCGCGCGCTCCGCTCCATTGGCCAGTGTCCTCCAGTCCCGACGAACCCG
TAAGGGGGCGCGATATCGGA

Product: transcription elongation factor regulatory protein

Products: NA

Alternate protein names: GreA/GreB Family Elongation Factor; Transcription Elongation Factor; Transcription Elongation Factor GreA/GreB Family; Transcription Elongation Factor GreA; Transcription Elongation Factor GreB; Transcription Elongation Factor Protein

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MSVAFTRENDLEATAADLPDRPISPHPNLVTPTGMAALDAALGEARAAYALAQMGDVQADRMAMARATRDLRYYSARRAS
AQLIEAVAHPQSVQFGATVTISREDGRRQVFRIVGEDEADPAKGSVSYVSPLAKALMSKVVGDVALVAGREVEVLEIA

Sequences:

>Translated_158_residues
MSVAFTRENDLEATAADLPDRPISPHPNLVTPTGMAALDAALGEARAAYALAQMGDVQADRMAMARATRDLRYYSARRAS
AQLIEAVAHPQSVQFGATVTISREDGRRQVFRIVGEDEADPAKGSVSYVSPLAKALMSKVVGDVALVAGREVEVLEIA
>Mature_157_residues
SVAFTRENDLEATAADLPDRPISPHPNLVTPTGMAALDAALGEARAAYALAQMGDVQADRMAMARATRDLRYYSARRASA
QLIEAVAHPQSVQFGATVTISREDGRRQVFRIVGEDEADPAKGSVSYVSPLAKALMSKVVGDVALVAGREVEVLEIA

Specific function: Necessary For Efficient RNA Polymerase Transcription Elongation Past Template-Encoded Arresting Sites. The Arresting Sites In DNA Have The Property Of Trapping A Certain Fraction Of Elongating RNA Polymerases That Pass Through, Resulting In Locked Ternar

COG id: COG0782

COG function: function code K; Transcription elongation factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 259 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16810; Mature: 16679

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVAFTRENDLEATAADLPDRPISPHPNLVTPTGMAALDAALGEARAAYALAQMGDVQAD
CCEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
RMAMARATRDLRYYSARRASAQLIEAVAHPQSVQFGATVTISREDGRRQVFRIVGEDEAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCEEEEEECCCCHHHHHHHHCCCCCC
PAKGSVSYVSPLAKALMSKVVGDVALVAGREVEVLEIA
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
>Mature Secondary Structure 
SVAFTRENDLEATAADLPDRPISPHPNLVTPTGMAALDAALGEARAAYALAQMGDVQAD
CEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
RMAMARATRDLRYYSARRASAQLIEAVAHPQSVQFGATVTISREDGRRQVFRIVGEDEAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCEEEEEECCCCHHHHHHHHCCCCCC
PAKGSVSYVSPLAKALMSKVVGDVALVAGREVEVLEIA
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA