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The map label for this gene is ywcH [H]

Identifier: 154246866

GI number: 154246866

Start: 3255479

End: 3256525

Strand: Direct

Name: ywcH [H]

Synonym: Xaut_2931

Alternate gene names: 154246866

Gene position: 3255479-3256525 (Clockwise)

Preceding gene: 154246865

Following gene: 154246871

Centisome position: 61.32

GC content: 69.05

Gene sequence:

>1047_bases
TTGCGCAACCGAGAAGCATCCACTTTGAAGAAGATCGGCTTTCTCTCGTTCGGACACTGGACGCCCTCGCCCCAGTCGCA
GACGCGCTCGGCCGCCGATGCGCTGCTCCAATCCATCGAGCTGGCGGTGGCGGCGGAGGATCTGGGCGCCGACGGCGCCT
ATTTCCGCGTCCATCATTTTGCCCGCCAGCTGGCCGCGCCCTTCCCGCTGCTCGCCGCCGTGGGCGCGCGCACGCGGCGG
ATCGAGATCGGCACCGCCGTCATCGACATGCGCTATGAGAACCCGCTCTACATGGCGGAGGATGCCGGCGCGGCCGACCT
CATTGCCGGCGGGAGGCTGCAACTCGGCATCAGCCGGGGCTCGCCGGAGCAGGTCATCGAGGGGTGGCGGCACTTCGGCT
ATGCGCCGCCGGACGGCCAGACCGACGCCGACATGGCCCGCCGCCATGCCGAGGTCTTCCTTCAGGTGCTTGAGGGCGAG
GGCTTCGCGAAGCCCAACCCGCGGCCCATGTTCCCCAACCCGCCCGGCCTGCTGCGGCTGGAACCCCATTCCGAGGGGCT
GCGCGAGCGCATCTGGTGGGGCGCCAGCTCCAACGCCACCGCAGTGTGGGCGGCGAAGCTGGGCCTGAACCTGCAGAGTT
CCACCCTGAAGAACGACGAGACCGGCGAACCCTTCCACATCCAGCAGGCCGCTCAGATCCGCGCCTATCGTGCCGCGTGG
GTGGAGGCGGGCCACGCCCGTGCGCCCCGCATCTCGGTCAGCCGCTCCATCTTCGCTTTGGTGGACGATCGCGACCGCGC
CTATTTCGGCCGGGGCGGAAAGGACGAGGATTCCGTCGGCTTCATCGACGAGAAGACCCGCGCCATCTTCGGCCGCAGCT
ACGCCGACGAGCCGGACGCGCTCATCCGGCAGCTTGCCGCTGACGAGGCCATCGCCGAAGCGGACACGCTGCTGCTCACC
GTGCCGAACCAGTTGGGCGTCGACTACAACGCGCACGTGATCGAGGCCATCCTCACCCATGTGGCGCCCGCGCTGGGCTG
GCGTTGA

Upstream 100 bases:

>100_bases
CTCCGCGACGGCCGGCCCCCACCATGGCGGTGAGGGGGCGAGGAGCGACCGTGGCGCGTCAGGTGCGTCCGGCGGGGCGT
CGGGCTAGGCTGGCGCATCT

Downstream 100 bases:

>100_bases
GGCGGGTTCGCAGAGGGCTTGGGGCACAACGGGTGCGACGGCTGTCGCATTCGTCGTTCCGGGGCGCCCGATGGGCGGGT
GACCATGGATGGGGGTGGTG

Product: luciferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MRNREASTLKKIGFLSFGHWTPSPQSQTRSAADALLQSIELAVAAEDLGADGAYFRVHHFARQLAAPFPLLAAVGARTRR
IEIGTAVIDMRYENPLYMAEDAGAADLIAGGRLQLGISRGSPEQVIEGWRHFGYAPPDGQTDADMARRHAEVFLQVLEGE
GFAKPNPRPMFPNPPGLLRLEPHSEGLRERIWWGASSNATAVWAAKLGLNLQSSTLKNDETGEPFHIQQAAQIRAYRAAW
VEAGHARAPRISVSRSIFALVDDRDRAYFGRGGKDEDSVGFIDEKTRAIFGRSYADEPDALIRQLAADEAIAEADTLLLT
VPNQLGVDYNAHVIEAILTHVAPALGWR

Sequences:

>Translated_348_residues
MRNREASTLKKIGFLSFGHWTPSPQSQTRSAADALLQSIELAVAAEDLGADGAYFRVHHFARQLAAPFPLLAAVGARTRR
IEIGTAVIDMRYENPLYMAEDAGAADLIAGGRLQLGISRGSPEQVIEGWRHFGYAPPDGQTDADMARRHAEVFLQVLEGE
GFAKPNPRPMFPNPPGLLRLEPHSEGLRERIWWGASSNATAVWAAKLGLNLQSSTLKNDETGEPFHIQQAAQIRAYRAAW
VEAGHARAPRISVSRSIFALVDDRDRAYFGRGGKDEDSVGFIDEKTRAIFGRSYADEPDALIRQLAADEAIAEADTLLLT
VPNQLGVDYNAHVIEAILTHVAPALGWR
>Mature_348_residues
MRNREASTLKKIGFLSFGHWTPSPQSQTRSAADALLQSIELAVAAEDLGADGAYFRVHHFARQLAAPFPLLAAVGARTRR
IEIGTAVIDMRYENPLYMAEDAGAADLIAGGRLQLGISRGSPEQVIEGWRHFGYAPPDGQTDADMARRHAEVFLQVLEGE
GFAKPNPRPMFPNPPGLLRLEPHSEGLRERIWWGASSNATAVWAAKLGLNLQSSTLKNDETGEPFHIQQAAQIRAYRAAW
VEAGHARAPRISVSRSIFALVDDRDRAYFGRGGKDEDSVGFIDEKTRAIFGRSYADEPDALIRQLAADEAIAEADTLLLT
VPNQLGVDYNAHVIEAILTHVAPALGWR

Specific function: Unknown

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR019949 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 38108; Mature: 38108

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNREASTLKKIGFLSFGHWTPSPQSQTRSAADALLQSIELAVAAEDLGADGAYFRVHHF
CCCCHHHHHHHHHCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ARQLAAPFPLLAAVGARTRRIEIGTAVIDMRYENPLYMAEDAGAADLIAGGRLQLGISRG
HHHHCCCHHHHHHHCCCCEEEEECEEEEEEEECCCEEEECCCCCHHHCCCCEEEEEECCC
SPEQVIEGWRHFGYAPPDGQTDADMARRHAEVFLQVLEGEGFAKPNPRPMFPNPPGLLRL
CHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEE
EPHSEGLRERIWWGASSNATAVWAAKLGLNLQSSTLKNDETGEPFHIQQAAQIRAYRAAW
CCCHHHHHHHHEECCCCCCCEEEEEECCCCCCHHCCCCCCCCCCEEHHHHHHHHHHHHHH
VEAGHARAPRISVSRSIFALVDDRDRAYFGRGGKDEDSVGFIDEKTRAIFGRSYADEPDA
HHCCCCCCCCEECCCEEEEEECCCCCEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHH
LIRQLAADEAIAEADTLLLTVPNQLGVDYNAHVIEAILTHVAPALGWR
HHHHHHHHHHHHCCCEEEEECCHHHCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRNREASTLKKIGFLSFGHWTPSPQSQTRSAADALLQSIELAVAAEDLGADGAYFRVHHF
CCCCHHHHHHHHHCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ARQLAAPFPLLAAVGARTRRIEIGTAVIDMRYENPLYMAEDAGAADLIAGGRLQLGISRG
HHHHCCCHHHHHHHCCCCEEEEECEEEEEEEECCCEEEECCCCCHHHCCCCEEEEEECCC
SPEQVIEGWRHFGYAPPDGQTDADMARRHAEVFLQVLEGEGFAKPNPRPMFPNPPGLLRL
CHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEE
EPHSEGLRERIWWGASSNATAVWAAKLGLNLQSSTLKNDETGEPFHIQQAAQIRAYRAAW
CCCHHHHHHHHEECCCCCCCEEEEEECCCCCCHHCCCCCCCCCCEEHHHHHHHHHHHHHH
VEAGHARAPRISVSRSIFALVDDRDRAYFGRGGKDEDSVGFIDEKTRAIFGRSYADEPDA
HHCCCCCCCCEECCCEEEEEECCCCCEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHH
LIRQLAADEAIAEADTLLLTVPNQLGVDYNAHVIEAILTHVAPALGWR
HHHHHHHHHHHHCCCEEEEECCHHHCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]