| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is trxB [H]
Identifier: 154246692
GI number: 154246692
Start: 3049179
End: 3050141
Strand: Direct
Name: trxB [H]
Synonym: Xaut_2753
Alternate gene names: 154246692
Gene position: 3049179-3050141 (Clockwise)
Preceding gene: 154246690
Following gene: 154246693
Centisome position: 57.43
GC content: 66.56
Gene sequence:
>963_bases ATGACTGCCCACACCGTCAAAGTCGTCATCATCGGCTCGGGGCCGGCTGGCTACACCGCGGCCATCTACGCAGCGCGTGC AATGCTGGAGCCGGTGCTGTTCGAGGGCATCCAGCCCGGCGGCCAGCTCACCATCACCACGGATGTGGAGAATTATCCCG GCTTCGCCGACCCCATCCAAGGGCCGTGGCTGATGGAGCAGATGCGTGCGCAGGCCGAGCACGTGGGCACCAAGATCGTC ACCGACCATGTGGCGAGCCTCGACCTGTCGCACCGGCCGTTCCGCATGGTGACCGAATCGGGCGACACCTATGTGGCGGA TGTGGTGATCCTGGCCACCGGCGCCCAGGCGCGCTGGCTTGGGCTCGAATCGGAGGCGGCCTACCGCGGCTCCGGCGTGT CCGCCTGCGCCACCTGCGACGGCTTCTTCTATCGCGGCAAGGACGTGGTGGTGGTTGGCGGCGGCAACACGGCAGTGGAA GAGGCGCTGTTCCTCACCAATTTCGCCTCCAACGTCACCGTCGTGCATCGCCGCGACAGCTTCCGCTCGGAGAAGATCCT GCAGGAACGGCTGTTCGCCCATCCCAAGGTGAAGGTGGTGTGGAACGCGGAGCTGGCCGAGGTGGTGGGCCAGGACGACC CCTTCACCAAGGTCACAGGCGCGAAACTGCGTGACGTGCGCACCGGAGTCCTCACCGAGCTACCCGCTGACGGCATATTT ATCGCAATTGGCCATGCGCCTGCCACAGAGCTGGTAAAAGACCAGCTGAAGCTCAAGGAGAGCGGCTATGTCTGGACCGC GCCCGATTCGACGGCAACGTCGGTGCCGGGCGTGTTCGCGGCCGGCGACGTGGCGGACGACGTCTATCGTCAGGCCGTCA CCGCCGCGGGCCGGGGCTGCATGGCCGCTCTCGAGGCGGAGCGCTTCCTGGCCCACCAGGGCGTGGCGAAGGCGGCGGAA TAA
Upstream 100 bases:
>100_bases ACATTCGAGCATAGCTCACGCTGCGGCCGGGAGCGCCGGCCCCCGCGGCCGTCGCCGCTCCACATCCTGCCGCGGCACCG CACGGATTTCGGGGACACTC
Downstream 100 bases:
>100_bases CCCGTCGCTCGCCCGCGCCGGCGTCCGGCGGCGATCCTGTTTGGCGGGAAGGGTCGGCTGGCCGGGGTGGGTCCTCGGAT TGTCCGTTCTTCCGCATTGA
Product: thioredoxin reductase
Products: NA
Alternate protein names: TRXR [H]
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MTAHTVKVVIIGSGPAGYTAAIYAARAMLEPVLFEGIQPGGQLTITTDVENYPGFADPIQGPWLMEQMRAQAEHVGTKIV TDHVASLDLSHRPFRMVTESGDTYVADVVILATGAQARWLGLESEAAYRGSGVSACATCDGFFYRGKDVVVVGGGNTAVE EALFLTNFASNVTVVHRRDSFRSEKILQERLFAHPKVKVVWNAELAEVVGQDDPFTKVTGAKLRDVRTGVLTELPADGIF IAIGHAPATELVKDQLKLKESGYVWTAPDSTATSVPGVFAAGDVADDVYRQAVTAAGRGCMAALEAERFLAHQGVAKAAE
Sequences:
>Translated_320_residues MTAHTVKVVIIGSGPAGYTAAIYAARAMLEPVLFEGIQPGGQLTITTDVENYPGFADPIQGPWLMEQMRAQAEHVGTKIV TDHVASLDLSHRPFRMVTESGDTYVADVVILATGAQARWLGLESEAAYRGSGVSACATCDGFFYRGKDVVVVGGGNTAVE EALFLTNFASNVTVVHRRDSFRSEKILQERLFAHPKVKVVWNAELAEVVGQDDPFTKVTGAKLRDVRTGVLTELPADGIF IAIGHAPATELVKDQLKLKESGYVWTAPDSTATSVPGVFAAGDVADDVYRQAVTAAGRGCMAALEAERFLAHQGVAKAAE >Mature_319_residues TAHTVKVVIIGSGPAGYTAAIYAARAMLEPVLFEGIQPGGQLTITTDVENYPGFADPIQGPWLMEQMRAQAEHVGTKIVT DHVASLDLSHRPFRMVTESGDTYVADVVILATGAQARWLGLESEAAYRGSGVSACATCDGFFYRGKDVVVVGGGNTAVEE ALFLTNFASNVTVVHRRDSFRSEKILQERLFAHPKVKVVWNAELAEVVGQDDPFTKVTGAKLRDVRTGVLTELPADGIFI AIGHAPATELVKDQLKLKESGYVWTAPDSTATSVPGVFAAGDVADDVYRQAVTAAGRGCMAALEAERFLAHQGVAKAAE
Specific function: Unknown
COG id: COG0492
COG function: function code O; Thioredoxin reductase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1787114, Length=325, Percent_Identity=53.5384615384615, Blast_Score=332, Evalue=1e-92, Organism=Escherichia coli, GI87081763, Length=307, Percent_Identity=33.2247557003257, Blast_Score=134, Evalue=8e-33, Organism=Saccharomyces cerevisiae, GI6321898, Length=317, Percent_Identity=47.9495268138801, Blast_Score=300, Evalue=3e-82, Organism=Saccharomyces cerevisiae, GI6320560, Length=314, Percent_Identity=46.1783439490446, Blast_Score=288, Evalue=1e-78,
Paralogues:
None
Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR008255 - InterPro: IPR001327 - InterPro: IPR000103 - InterPro: IPR005982 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: =1.8.1.9 [H]
Molecular weight: Translated: 34093; Mature: 33962
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: PS00573 PYRIDINE_REDOX_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAHTVKVVIIGSGPAGYTAAIYAARAMLEPVLFEGIQPGGQLTITTDVENYPGFADPIQ CCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCC GPWLMEQMRAQAEHVGTKIVTDHVASLDLSHRPFRMVTESGDTYVADVVILATGAQARWL CHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEEEEECCCCEEEE GLESEAAYRGSGVSACATCDGFFYRGKDVVVVGGGNTAVEEALFLTNFASNVTVVHRRDS CCCCCCCCCCCCCCEEEECCCEEECCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCC FRSEKILQERLFAHPKVKVVWNAELAEVVGQDDPFTKVTGAKLRDVRTGVLTELPADGIF HHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEE IAIGHAPATELVKDQLKLKESGYVWTAPDSTATSVPGVFAAGDVADDVYRQAVTAAGRGC EEECCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCEECCCHHHHHHHHHHHHCCCHH MAALEAERFLAHQGVAKAAE HHHHHHHHHHHHHCHHHCCC >Mature Secondary Structure TAHTVKVVIIGSGPAGYTAAIYAARAMLEPVLFEGIQPGGQLTITTDVENYPGFADPIQ CCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCC GPWLMEQMRAQAEHVGTKIVTDHVASLDLSHRPFRMVTESGDTYVADVVILATGAQARWL CHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEEEEECCCCEEEE GLESEAAYRGSGVSACATCDGFFYRGKDVVVVGGGNTAVEEALFLTNFASNVTVVHRRDS CCCCCCCCCCCCCCEEEECCCEEECCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCC FRSEKILQERLFAHPKVKVVWNAELAEVVGQDDPFTKVTGAKLRDVRTGVLTELPADGIF HHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEE IAIGHAPATELVKDQLKLKESGYVWTAPDSTATSVPGVFAAGDVADDVYRQAVTAAGRGC EEECCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCEECCCHHHHHHHHHHHHCCCHH MAALEAERFLAHQGVAKAAE HHHHHHHHHHHHHCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA