Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is yejA [C]

Identifier: 154246573

GI number: 154246573

Start: 2920262

End: 2922178

Strand: Direct

Name: yejA [C]

Synonym: Xaut_2632

Alternate gene names: 154246573

Gene position: 2920262-2922178 (Clockwise)

Preceding gene: 154246572

Following gene: 154246574

Centisome position: 55.01

GC content: 65.36

Gene sequence:

>1917_bases
ATGCGCCTGCCGTCCGTTCGCCGCCTCGCCGTCCTCGCAGCCGTGGCGTGGGCCGCGGCCGCCCCGGGTGGCCTCGCGCA
GGCGCAGGTGGCTCCCGCTGCCGGGGAAAGCCCCGCACCGGTGTTCCGCCACGGCCTCTCCCTCATGGGACAGCCGAAAT
ATCCCGCCGGCTTTCCCCATTTCGATTATGTGAATCCGGCGGCGCCCAAGGGCGGCCTGCTGCGCCTGGCCGAAGACGGC
ACCTTCGATACCTTCAACTTCGTGGTGCCGAGGGGCACGCCGGCGGCGGGCATCAATCTCATCTACGACACCCTCATGAC
CGCCGCCTATGACGAGGTGTCGACCGAGTATGGCCTCATCGCCGAGGGCGCGAGCCATCCGGCCGATTTCTCCTCCGTCA
CCTACCGGCTGCGGGCCGATGCCAAATGGCATGACGGCACCCCGATCACCCCTGACGACGTGGTGTTCTCCTTCGAGGCG
CTGACGAAGAACAACCCCAACCAGCGCTTCTATTACAGCCACGTGGCGAAGGCGGAGAAGACCGGCGAGCGGGACGTGAC
CTTCACCTTCGACCAGGCCGGCAACCGCGAGCTGCCGCAGATCGTGGGCCAGCTCACCATCCTGCCCAAGCACTGGTGGA
CCGGCACCGATGCCGCCGGCAAGCCGCGCGACATCACCCAGGGCTCGCTGGAGGTGCCGCTGGGCTCCGGCGCCTACAGG
ATCAAGAGCTTCGTGCCCAGTCGTTCCATCACCTACGAGCGGGTGAAGGATTATTGGGCCAAAGACCTTAACGTGAATGT
GGGTAAGGATAATTTCGACGAGATCCGGTACGAGTATTTCCGCGACGACACGGTGATGCTGGAGGCCTTCAAGGCCGACA
CCTATGATTTCCGCACCGAATCCTCCGCCAAGAACTGGGCCACGGCCTATGATTTCCCGGCGCGGGCGGACGGGCGGGTG
GTGCTCGAAATGTTCGAGAACCGCGCGTCCGGCATCATGCAGGCCTTCATCCCCAACCTGCGGCGCGACAAGTTCAAGGA
CCCGCGGGTGCGCCGCGCGCTGAACTATGCGCTGGATTTCGAGGGCATGAACCACACCCTCTTCTTCGGGCAGTACAAGC
GCATCAATTCCTTCTTCTCCGGCACGGAGCTGGCCTCCTCCGGCCTGCCGCAGGGCCGCGAGCTGGAAATCCTGAAGGGC
GTGAAGGACCTGGTGCCTCCGCAGGTGTTCACCACCGCCTACACCAATCCCGAGAGCGGAACGGAGGACTTGCGGCGGAA
CAATCTGCGCGAGGCCTCCCGCCTGCTGAAGGATGCCGGCTACGAGATCAAGAACCGCAAGCTGGTGGACGCCAAGGGCG
AGGCCTTCACGCTTGAACTGCTCATCTCCAGCCCGGCCATGGAGCGGGTGGCGGTGTTCTACAAGCCGGCGCTGGAGCGC
CTCGGTATCACCGTCACCATCCGCCTCGTGGATTCCTCCCAGTACATCAACCGGGTGCGGGCGCGGGACTTCGACATGAT
CGTCTCCGGCTGGGGCCAGTCCCTGTCGCCGGGCAACGAGCAGCGTGAGTTCTGGGGTACGGAAGCCGCCGACCGGGAGG
GCTCGCGGAACCTCGCCGGCATCCGCGACAAGGCGGTGGACATCCTGATCGAGAAGGTGATCTACGCCACCGACCGGGCC
GACCTTGTGGCCGCCACCCATGCCCTCGACCGGGTGCTGCTGTGGAACGAATATGTCGTCCCCGCCTGGACGTTGAATTA
TACGCGCACAGCGCGATGGGACCGCTTCGCCCATCCGCCGACCCTGCCCACCTTCTCCTTCGCCTTCCCCGACATCTGGT
GGTTCGATCCGGCCAAGGCGGCCAAGGTGAATGCGGTCGGCCCGGCAAGCGGGACCAACAGCGGGACCAGCAAATGA

Upstream 100 bases:

>100_bases
CCATGTTTCTGCCGTCGCTCGCGGTGCCATAATCAGCTATTGCCGAGAGCGCTGAAGTCCCGTCCTGATTTGCGACCTGA
GACCCGACCTGGAGAAACCG

Downstream 100 bases:

>100_bases
GCCTGTCGCGCCGCACGCTGCTGCTGTCCGCCGCCTCCGCCGTCACCTTGCTGCCGGCCATGGCACGTGGGCAGCCGGCG
CCGCAGGACGCGGCGGCGAA

Product: extracellular solute-binding protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 638; Mature: 638

Protein sequence:

>638_residues
MRLPSVRRLAVLAAVAWAAAAPGGLAQAQVAPAAGESPAPVFRHGLSLMGQPKYPAGFPHFDYVNPAAPKGGLLRLAEDG
TFDTFNFVVPRGTPAAGINLIYDTLMTAAYDEVSTEYGLIAEGASHPADFSSVTYRLRADAKWHDGTPITPDDVVFSFEA
LTKNNPNQRFYYSHVAKAEKTGERDVTFTFDQAGNRELPQIVGQLTILPKHWWTGTDAAGKPRDITQGSLEVPLGSGAYR
IKSFVPSRSITYERVKDYWAKDLNVNVGKDNFDEIRYEYFRDDTVMLEAFKADTYDFRTESSAKNWATAYDFPARADGRV
VLEMFENRASGIMQAFIPNLRRDKFKDPRVRRALNYALDFEGMNHTLFFGQYKRINSFFSGTELASSGLPQGRELEILKG
VKDLVPPQVFTTAYTNPESGTEDLRRNNLREASRLLKDAGYEIKNRKLVDAKGEAFTLELLISSPAMERVAVFYKPALER
LGITVTIRLVDSSQYINRVRARDFDMIVSGWGQSLSPGNEQREFWGTEAADREGSRNLAGIRDKAVDILIEKVIYATDRA
DLVAATHALDRVLLWNEYVVPAWTLNYTRTARWDRFAHPPTLPTFSFAFPDIWWFDPAKAAKVNAVGPASGTNSGTSK

Sequences:

>Translated_638_residues
MRLPSVRRLAVLAAVAWAAAAPGGLAQAQVAPAAGESPAPVFRHGLSLMGQPKYPAGFPHFDYVNPAAPKGGLLRLAEDG
TFDTFNFVVPRGTPAAGINLIYDTLMTAAYDEVSTEYGLIAEGASHPADFSSVTYRLRADAKWHDGTPITPDDVVFSFEA
LTKNNPNQRFYYSHVAKAEKTGERDVTFTFDQAGNRELPQIVGQLTILPKHWWTGTDAAGKPRDITQGSLEVPLGSGAYR
IKSFVPSRSITYERVKDYWAKDLNVNVGKDNFDEIRYEYFRDDTVMLEAFKADTYDFRTESSAKNWATAYDFPARADGRV
VLEMFENRASGIMQAFIPNLRRDKFKDPRVRRALNYALDFEGMNHTLFFGQYKRINSFFSGTELASSGLPQGRELEILKG
VKDLVPPQVFTTAYTNPESGTEDLRRNNLREASRLLKDAGYEIKNRKLVDAKGEAFTLELLISSPAMERVAVFYKPALER
LGITVTIRLVDSSQYINRVRARDFDMIVSGWGQSLSPGNEQREFWGTEAADREGSRNLAGIRDKAVDILIEKVIYATDRA
DLVAATHALDRVLLWNEYVVPAWTLNYTRTARWDRFAHPPTLPTFSFAFPDIWWFDPAKAAKVNAVGPASGTNSGTSK
>Mature_638_residues
MRLPSVRRLAVLAAVAWAAAAPGGLAQAQVAPAAGESPAPVFRHGLSLMGQPKYPAGFPHFDYVNPAAPKGGLLRLAEDG
TFDTFNFVVPRGTPAAGINLIYDTLMTAAYDEVSTEYGLIAEGASHPADFSSVTYRLRADAKWHDGTPITPDDVVFSFEA
LTKNNPNQRFYYSHVAKAEKTGERDVTFTFDQAGNRELPQIVGQLTILPKHWWTGTDAAGKPRDITQGSLEVPLGSGAYR
IKSFVPSRSITYERVKDYWAKDLNVNVGKDNFDEIRYEYFRDDTVMLEAFKADTYDFRTESSAKNWATAYDFPARADGRV
VLEMFENRASGIMQAFIPNLRRDKFKDPRVRRALNYALDFEGMNHTLFFGQYKRINSFFSGTELASSGLPQGRELEILKG
VKDLVPPQVFTTAYTNPESGTEDLRRNNLREASRLLKDAGYEIKNRKLVDAKGEAFTLELLISSPAMERVAVFYKPALER
LGITVTIRLVDSSQYINRVRARDFDMIVSGWGQSLSPGNEQREFWGTEAADREGSRNLAGIRDKAVDILIEKVIYATDRA
DLVAATHALDRVLLWNEYVVPAWTLNYTRTARWDRFAHPPTLPTFSFAFPDIWWFDPAKAAKVNAVGPASGTNSGTSK

Specific function: Possible binding-protein with either a transport or enzymatic activity [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI87082063, Length=583, Percent_Identity=37.3927958833619, Blast_Score=386, Evalue=1e-108,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 71171; Mature: 71171

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLPSVRRLAVLAAVAWAAAAPGGLAQAQVAPAAGESPAPVFRHGLSLMGQPKYPAGFPH
CCCCHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
FDYVNPAAPKGGLLRLAEDGTFDTFNFVVPRGTPAAGINLIYDTLMTAAYDEVSTEYGLI
CCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEE
AEGASHPADFSSVTYRLRADAKWHDGTPITPDDVVFSFEALTKNNPNQRFYYSHVAKAEK
ECCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHEEEEHHHHCCCCCCEEEHHHHHHHHH
TGERDVTFTFDQAGNRELPQIVGQLTILPKHWWTGTDAAGKPRDITQGSLEVPLGSGAYR
CCCCCEEEEECCCCCCHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCHHH
IKSFVPSRSITYERVKDYWAKDLNVNVGKDNFDEIRYEYFRDDTVMLEAFKADTYDFRTE
HHHHCCCCCCHHHHHHHHHHHCCEEECCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCC
SSAKNWATAYDFPARADGRVVLEMFENRASGIMQAFIPNLRRDKFKDPRVRRALNYALDF
CCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHEEC
EGMNHTLFFGQYKRINSFFSGTELASSGLPQGRELEILKGVKDLVPPQVFTTAYTNPESG
CCCCEEEEEHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCC
TEDLRRNNLREASRLLKDAGYEIKNRKLVDAKGEAFTLELLISSPAMERVAVFYKPALER
HHHHHHCCHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHH
LGITVTIRLVDSSQYINRVRARDFDMIVSGWGQSLSPGNEQREFWGTEAADREGSRNLAG
CCEEEEEEEECCHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCC
IRDKAVDILIEKVIYATDRADLVAATHALDRVLLWNEYVVPAWTLNYTRTARWDRFAHPP
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEECEEEEECCCCCCCCCCCCCCC
TLPTFSFAFPDIWWFDPAKAAKVNAVGPASGTNSGTSK
CCCCCCCCCCCCEEECCCCCCEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MRLPSVRRLAVLAAVAWAAAAPGGLAQAQVAPAAGESPAPVFRHGLSLMGQPKYPAGFPH
CCCCHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
FDYVNPAAPKGGLLRLAEDGTFDTFNFVVPRGTPAAGINLIYDTLMTAAYDEVSTEYGLI
CCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEE
AEGASHPADFSSVTYRLRADAKWHDGTPITPDDVVFSFEALTKNNPNQRFYYSHVAKAEK
ECCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHEEEEHHHHCCCCCCEEEHHHHHHHHH
TGERDVTFTFDQAGNRELPQIVGQLTILPKHWWTGTDAAGKPRDITQGSLEVPLGSGAYR
CCCCCEEEEECCCCCCHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCHHH
IKSFVPSRSITYERVKDYWAKDLNVNVGKDNFDEIRYEYFRDDTVMLEAFKADTYDFRTE
HHHHCCCCCCHHHHHHHHHHHCCEEECCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCC
SSAKNWATAYDFPARADGRVVLEMFENRASGIMQAFIPNLRRDKFKDPRVRRALNYALDF
CCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHEEC
EGMNHTLFFGQYKRINSFFSGTELASSGLPQGRELEILKGVKDLVPPQVFTTAYTNPESG
CCCCEEEEEHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCC
TEDLRRNNLREASRLLKDAGYEIKNRKLVDAKGEAFTLELLISSPAMERVAVFYKPALER
HHHHHHCCHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHH
LGITVTIRLVDSSQYINRVRARDFDMIVSGWGQSLSPGNEQREFWGTEAADREGSRNLAG
CCEEEEEEEECCHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCC
IRDKAVDILIEKVIYATDRADLVAATHALDRVLLWNEYVVPAWTLNYTRTARWDRFAHPP
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEECEEEEECCCCCCCCCCCCCCC
TLPTFSFAFPDIWWFDPAKAAKVNAVGPASGTNSGTSK
CCCCCCCCCCCCEEECCCCCCEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]