Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is yejA [H]

Identifier: 154246574

GI number: 154246574

Start: 2922175

End: 2924064

Strand: Direct

Name: yejA [H]

Synonym: Xaut_2633

Alternate gene names: 154246574

Gene position: 2922175-2924064 (Clockwise)

Preceding gene: 154246573

Following gene: 154246575

Centisome position: 55.04

GC content: 68.41

Gene sequence:

>1890_bases
ATGAGCCTGTCGCGCCGCACGCTGCTGCTGTCCGCCGCCTCCGCCGTCACCTTGCTGCCGGCCATGGCACGTGGGCAGCC
GGCGCCGCAGGACGCGGCGGCGAACGAGGGCGCGGCCGCCTCCGCCGCGGTGGAGCGGCACGGCCTGTCCTTCTTCGGCG
ACCTGCGGTATCCGGCCGGCTTCACCCATTTCGACTATGTGGACCCGGACGCGCCCAAGGGCGGTCCCTTCTCCCAGATG
GGCCGGGCGACCTTCTACAACCAGTCGCTCAACACCTTCGACACGCTGAACCCCTACAACCAGCGCGGCAACGGCGCCCA
GGGCATCGAGCTGATCTACGATACGCTGATGACCGCCGCCGGCGACGAGAAGAGCGCCATGTACGGCCGCCTCGCCAGCT
CGGTGGTGATCGCCGACGAGGGGCTCACCTACCGCTTCAAGCTGCGCCCGCAGGCGCGCTTCCATGACGGCACGCCTGTG
ACGGCGGACGACGTGGTGGCGACCTTCGAGGCCTTCAAGGCCGACGCCTACGAGACCATCCGCATGGCCCTGCGCGATCT
CACCGCCGTGGAGGCGGATGGGCCGGGCGAGGTGGTGATGCGCTTCCGCCCCGGCCGCGCCCGCGACGTGCCGCTCACCG
CCGCCGGACTGCCGATCTTCTCTCGCGCCTTCCTGGCGAAGCACCCGTTCAACCAGTCCTCGCTGGAAGTACCGCTGGGC
TCGGGGCCATATCGGGTGAAGAAGTTCGAGCAGGGCCGCTTCATCGAATATGAGCGGGTGCCCGACTATTGGGGCCGCGA
CCTGCCGGTGATGAAGGGCCGCTTCAACTTCGACACGGTGCGCTACGAATATTTCCGCGACCGGGTGGCGGGCCTGGAAG
GCTTCAAGGCCAGGGCCTATCTGTTCCGCGAGGAGTTCACCGCTCGCGAATGGGCCACCGCCTATGATTTCCCCGCCGTG
CGCGAGGGGCGGGTGAAGGTGGAGACCCTGCCGGACAATTCCTTTTCCGGCGTGCAGGGCTGGTTCTTCAACACCCGCCG
CCCCAAGTTCTTCGACCGGCGCGTGCGCGAGGCCATCGGGATCCTGTTCGACTTCGACTGGACCCGCAAGAACCTGATGT
ACGATAGCTACACCCGCACCGTCTCCTTCTTCCAGAATTCGGAGATGATGGCGCAGGGGCTGCCCTCGCCCGCCGAACTG
AAGCTCTTGGAACCGTTCCGCGACCGCCTGCCGGAAGAGGTGTTCGGCGAGCCCTATGTCCCGCCGGTCTCCGACGGCAG
CGGAGAAGACCGCAACCTGCGCCGGCAGGCCCTCGCCCTCCTGAAGGATGCCGGCTGGAACGTGCAGCAGGGCAAGCTCG
TCGACGCCAAGGGCGAGGCCTTCACCATCGAGTTCCTGGATGATGACGGCGGCATGGAGCGCCATACGGCGCGCTTCATC
GGCCACCTGAAGAAAGTGGGCATCGACGCCACCTTCCGCATCGTGGACCCGGCCCAGTTCCAGCTGCGGCTGCAGGGCTT
CGACTTCGACATGGTGGTGCGCCGCTATTCCTTCGCGCCCTATCCGGGCGACGAACTGCGCGCCTATTTCTCGACCGAGG
CGGCGCGCACCCGCGGCTCCTACAACGTGGCCGGCATCGCCGACCCGGCGGTGGACGGGCTCATCAACGCGGCGCTGGCC
GCCCCGGACGCTGCCGCCCTCGTGGTCGCCTGCCAGGCGCTGGACCGGGTGCTGCGTGCCGGGCGCTACTGGATCCCCCA
GTGGTATTCCGGCCAGCACCGCATCGCCTACTGGAACCAGTTCGCCCGCCCTGCCACCAAGCCGCGCTACGACCTGGGCG
CGCTCGACACCTGGTGGAGCACCGGCACGGAGCCGGCCAGAGGCGGGTGA

Upstream 100 bases:

>100_bases
TCTCCTTCGCCTTCCCCGACATCTGGTGGTTCGATCCGGCCAAGGCGGCCAAGGTGAATGCGGTCGGCCCGGCAAGCGGG
ACCAACAGCGGGACCAGCAA

Downstream 100 bases:

>100_bases
AGCCCGCGCTTGAGGATCGACGGTTGACGGTGCGCCGGCTTGGCTGCACCGTCCGGCCGGATCGGGAGACGTGATGCTCG
CTTATATCATCCGCCGCATA

Product: extracellular solute-binding protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 629; Mature: 628

Protein sequence:

>629_residues
MSLSRRTLLLSAASAVTLLPAMARGQPAPQDAAANEGAAASAAVERHGLSFFGDLRYPAGFTHFDYVDPDAPKGGPFSQM
GRATFYNQSLNTFDTLNPYNQRGNGAQGIELIYDTLMTAAGDEKSAMYGRLASSVVIADEGLTYRFKLRPQARFHDGTPV
TADDVVATFEAFKADAYETIRMALRDLTAVEADGPGEVVMRFRPGRARDVPLTAAGLPIFSRAFLAKHPFNQSSLEVPLG
SGPYRVKKFEQGRFIEYERVPDYWGRDLPVMKGRFNFDTVRYEYFRDRVAGLEGFKARAYLFREEFTAREWATAYDFPAV
REGRVKVETLPDNSFSGVQGWFFNTRRPKFFDRRVREAIGILFDFDWTRKNLMYDSYTRTVSFFQNSEMMAQGLPSPAEL
KLLEPFRDRLPEEVFGEPYVPPVSDGSGEDRNLRRQALALLKDAGWNVQQGKLVDAKGEAFTIEFLDDDGGMERHTARFI
GHLKKVGIDATFRIVDPAQFQLRLQGFDFDMVVRRYSFAPYPGDELRAYFSTEAARTRGSYNVAGIADPAVDGLINAALA
APDAAALVVACQALDRVLRAGRYWIPQWYSGQHRIAYWNQFARPATKPRYDLGALDTWWSTGTEPARGG

Sequences:

>Translated_629_residues
MSLSRRTLLLSAASAVTLLPAMARGQPAPQDAAANEGAAASAAVERHGLSFFGDLRYPAGFTHFDYVDPDAPKGGPFSQM
GRATFYNQSLNTFDTLNPYNQRGNGAQGIELIYDTLMTAAGDEKSAMYGRLASSVVIADEGLTYRFKLRPQARFHDGTPV
TADDVVATFEAFKADAYETIRMALRDLTAVEADGPGEVVMRFRPGRARDVPLTAAGLPIFSRAFLAKHPFNQSSLEVPLG
SGPYRVKKFEQGRFIEYERVPDYWGRDLPVMKGRFNFDTVRYEYFRDRVAGLEGFKARAYLFREEFTAREWATAYDFPAV
REGRVKVETLPDNSFSGVQGWFFNTRRPKFFDRRVREAIGILFDFDWTRKNLMYDSYTRTVSFFQNSEMMAQGLPSPAEL
KLLEPFRDRLPEEVFGEPYVPPVSDGSGEDRNLRRQALALLKDAGWNVQQGKLVDAKGEAFTIEFLDDDGGMERHTARFI
GHLKKVGIDATFRIVDPAQFQLRLQGFDFDMVVRRYSFAPYPGDELRAYFSTEAARTRGSYNVAGIADPAVDGLINAALA
APDAAALVVACQALDRVLRAGRYWIPQWYSGQHRIAYWNQFARPATKPRYDLGALDTWWSTGTEPARGG
>Mature_628_residues
SLSRRTLLLSAASAVTLLPAMARGQPAPQDAAANEGAAASAAVERHGLSFFGDLRYPAGFTHFDYVDPDAPKGGPFSQMG
RATFYNQSLNTFDTLNPYNQRGNGAQGIELIYDTLMTAAGDEKSAMYGRLASSVVIADEGLTYRFKLRPQARFHDGTPVT
ADDVVATFEAFKADAYETIRMALRDLTAVEADGPGEVVMRFRPGRARDVPLTAAGLPIFSRAFLAKHPFNQSSLEVPLGS
GPYRVKKFEQGRFIEYERVPDYWGRDLPVMKGRFNFDTVRYEYFRDRVAGLEGFKARAYLFREEFTAREWATAYDFPAVR
EGRVKVETLPDNSFSGVQGWFFNTRRPKFFDRRVREAIGILFDFDWTRKNLMYDSYTRTVSFFQNSEMMAQGLPSPAELK
LLEPFRDRLPEEVFGEPYVPPVSDGSGEDRNLRRQALALLKDAGWNVQQGKLVDAKGEAFTIEFLDDDGGMERHTARFIG
HLKKVGIDATFRIVDPAQFQLRLQGFDFDMVVRRYSFAPYPGDELRAYFSTEAARTRGSYNVAGIADPAVDGLINAALAA
PDAAALVVACQALDRVLRAGRYWIPQWYSGQHRIAYWNQFARPATKPRYDLGALDTWWSTGTEPARGG

Specific function: Unknown

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae hbpA [H]

Homologues:

Organism=Escherichia coli, GI87082063, Length=594, Percent_Identity=38.047138047138, Blast_Score=396, Evalue=1e-111,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 70532; Mature: 70401

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSRRTLLLSAASAVTLLPAMARGQPAPQDAAANEGAAASAAVERHGLSFFGDLRYPAG
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCEECCCCCCC
FTHFDYVDPDAPKGGPFSQMGRATFYNQSLNTFDTLNPYNQRGNGAQGIELIYDTLMTAA
CCCCCCCCCCCCCCCCHHHHCCCEEECCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHC
GDEKSAMYGRLASSVVIADEGLTYRFKLRPQARFHDGTPVTADDVVATFEAFKADAYETI
CCCHHHHHHHHHCEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RMALRDLTAVEADGPGEVVMRFRPGRARDVPLTAAGLPIFSRAFLAKHPFNQSSLEVPLG
HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCEEEECC
SGPYRVKKFEQGRFIEYERVPDYWGRDLPVMKGRFNFDTVRYEYFRDRVAGLEGFKARAY
CCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHH
LFREEFTAREWATAYDFPAVREGRVKVETLPDNSFSGVQGWFFNTRRPKFFDRRVREAIG
HHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHC
ILFDFDWTRKNLMYDSYTRTVSFFQNSEMMAQGLPSPAELKLLEPFRDRLPEEVFGEPYV
EEEECCCCHHHCCHHHHHHHHHHHCCCHHHHHCCCCCHHEEEECHHHHCCCHHHCCCCCC
PPVSDGSGEDRNLRRQALALLKDAGWNVQQGKLVDAKGEAFTIEFLDDDGGMERHTARFI
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEECCCCCCHHHHHHHH
GHLKKVGIDATFRIVDPAQFQLRLQGFDFDMVVRRYSFAPYPGDELRAYFSTEAARTRGS
HHHHHCCCCEEEEEECCCEEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC
YNVAGIADPAVDGLINAALAAPDAAALVVACQALDRVLRAGRYWIPQWYSGQHRIAYWNQ
CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCCEEEEHHHH
FARPATKPRYDLGALDTWWSTGTEPARGG
HCCCCCCCCCCCCCCHHHHCCCCCCCCCC
>Mature Secondary Structure 
SLSRRTLLLSAASAVTLLPAMARGQPAPQDAAANEGAAASAAVERHGLSFFGDLRYPAG
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCEECCCCCCC
FTHFDYVDPDAPKGGPFSQMGRATFYNQSLNTFDTLNPYNQRGNGAQGIELIYDTLMTAA
CCCCCCCCCCCCCCCCHHHHCCCEEECCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHC
GDEKSAMYGRLASSVVIADEGLTYRFKLRPQARFHDGTPVTADDVVATFEAFKADAYETI
CCCHHHHHHHHHCEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RMALRDLTAVEADGPGEVVMRFRPGRARDVPLTAAGLPIFSRAFLAKHPFNQSSLEVPLG
HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCEEEECC
SGPYRVKKFEQGRFIEYERVPDYWGRDLPVMKGRFNFDTVRYEYFRDRVAGLEGFKARAY
CCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHH
LFREEFTAREWATAYDFPAVREGRVKVETLPDNSFSGVQGWFFNTRRPKFFDRRVREAIG
HHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHC
ILFDFDWTRKNLMYDSYTRTVSFFQNSEMMAQGLPSPAELKLLEPFRDRLPEEVFGEPYV
EEEECCCCHHHCCHHHHHHHHHHHCCCHHHHHCCCCCHHEEEECHHHHCCCHHHCCCCCC
PPVSDGSGEDRNLRRQALALLKDAGWNVQQGKLVDAKGEAFTIEFLDDDGGMERHTARFI
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEECCCCCCHHHHHHHH
GHLKKVGIDATFRIVDPAQFQLRLQGFDFDMVVRRYSFAPYPGDELRAYFSTEAARTRGS
HHHHHCCCCEEEEEECCCEEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC
YNVAGIADPAVDGLINAALAAPDAAALVVACQALDRVLRAGRYWIPQWYSGQHRIAYWNQ
CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCCEEEEHHHH
FARPATKPRYDLGALDTWWSTGTEPARGG
HCCCCCCCCCCCCCCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 9097040 [H]