| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is yidB [C]
Identifier: 154245598
GI number: 154245598
Start: 1873613
End: 1874029
Strand: Reverse
Name: yidB [C]
Synonym: Xaut_1654
Alternate gene names: 154245598
Gene position: 1874029-1873613 (Counterclockwise)
Preceding gene: 154245603
Following gene: 154245597
Centisome position: 35.3
GC content: 69.3
Gene sequence:
>417_bases ATGGGCCTCTTCGACAATATGGTGTCTGGCATCCTGAGCAACATGCTGAGCAAGGCCGGCACCGACGGCGCCGGCAGCCT GCTGGAGACGGTGCTGAATGGCCCCATGGGGCAGATGCTGCCCGGCCTGCTCAACTCGGCCTTCGCCAAGACGCCCTTCG GCAGCCTCGACGGCGTGCTGGAGCAGCTCCAGCAGGCCGGCCTCTCGGATGTAGTGGCGAGCTGGATCTCCAACGGCCCC AACGCGCCGGTCAGCGCCGAGCAGATCACGGCGGCCTTGGGCGCGGACCGGCTGGACGAGGTGGCAACCACCCTCGGCCT CTCGGCGGACCAGCTGCCGGACCTCCTGGCGCAGCACCTGCCCACCATCATCGATCGCCTGAGCCCCGAGGGCGTGCTGA ACGTGCCGGGCCGCTGA
Upstream 100 bases:
>100_bases CCGATCCGGTACACCAACCTCCACCGCGCCGCATCATGCAGTGCAGCGGAGCAGCATAGGGCGCGCCGGCGCGCGCCGCG GGACCAACGGAGCGTCGGGC
Downstream 100 bases:
>100_bases GTGCGTAGCGCCGACCCCGCGCGCCAGGCTCGTGCGATTTTCGGCGACGCGTTATAGAGTGGGCCCAAGCAACACAGACA TGAGCGGCGATGCGCGGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MGLFDNMVSGILSNMLSKAGTDGAGSLLETVLNGPMGQMLPGLLNSAFAKTPFGSLDGVLEQLQQAGLSDVVASWISNGP NAPVSAEQITAALGADRLDEVATTLGLSADQLPDLLAQHLPTIIDRLSPEGVLNVPGR
Sequences:
>Translated_138_residues MGLFDNMVSGILSNMLSKAGTDGAGSLLETVLNGPMGQMLPGLLNSAFAKTPFGSLDGVLEQLQQAGLSDVVASWISNGP NAPVSAEQITAALGADRLDEVATTLGLSADQLPDLLAQHLPTIIDRLSPEGVLNVPGR >Mature_137_residues GLFDNMVSGILSNMLSKAGTDGAGSLLETVLNGPMGQMLPGLLNSAFAKTPFGSLDGVLEQLQQAGLSDVVASWISNGPN APVSAEQITAALGADRLDEVATTLGLSADQLPDLLAQHLPTIIDRLSPEGVLNVPGR
Specific function: Unknown
COG id: COG3753
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082321, Length=79, Percent_Identity=40.5063291139241, Blast_Score=60, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14136; Mature: 14005
Theoretical pI: Translated: 3.89; Mature: 3.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLFDNMVSGILSNMLSKAGTDGAGSLLETVLNGPMGQMLPGLLNSAFAKTPFGSLDGVL CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHH EQLQQAGLSDVVASWISNGPNAPVSAEQITAALGADRLDEVATTLGLSADQLPDLLAQHL HHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH PTIIDRLSPEGVLNVPGR HHHHHHCCCCCCCCCCCC >Mature Secondary Structure GLFDNMVSGILSNMLSKAGTDGAGSLLETVLNGPMGQMLPGLLNSAFAKTPFGSLDGVL CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHH EQLQQAGLSDVVASWISNGPNAPVSAEQITAALGADRLDEVATTLGLSADQLPDLLAQHL HHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH PTIIDRLSPEGVLNVPGR HHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA