| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is folE
Identifier: 154245593
GI number: 154245593
Start: 1868240
End: 1868968
Strand: Reverse
Name: folE
Synonym: Xaut_1649
Alternate gene names: 154245593
Gene position: 1868968-1868240 (Counterclockwise)
Preceding gene: 154245595
Following gene: 154245592
Centisome position: 35.2
GC content: 66.26
Gene sequence:
>729_bases ATGGACGCGGTTGTGAAGTTGTTCAAGGCGCAGGCCGAGAACGAAGAGCGTGAGCGCAAGCTCAAGGCGGAAGCCAAGGC TGCCTCCAAGGCCGCGGCGCGGCCGGACGGTGCGCCCCCGGCGCCAAAAATTCATCCTCCCCTGCCGGATGGCACGCCCC GCCCCTCGCGGCAGGAGGCGGAAGCCGCCGTGCGAACTCTTCTTGCCTATATCGGCGAGGATCCCGCCCGCGAGGGGCTG CTCGACACGCCGAAGCGCGTGGTGAAGGCTTATGACGAGCTGTTCTCCGGCTATGGCGAGGACAGCGAGGAGTTGCTGGA GCGTACCTTCGGCGAGATCGGCACCTTCGACGATTTCGTGCTGGTGCGCGACATTCCCTTCCACTCCCATTGCGAGCACC ACATGGTGCCTTTCGTGGGCAAGGCGCACATCGCCTATTTCCCGGTGGAGCGGGTGGTGGGCCTGTCCAAGATCGCGCGG GTGGTGGACATCTTCGCCCGCCGGCTGCAGACGCAGGAGCACCTGACCTCGCAGATCACCACCACTCTCGACGAGGGCCT GCGCCCGCGCGGCGTGGCGGTGATGATCGAGGCCGAGCACATGTGCATGTCCATGCGCGGCATCACCAAGCAGGGCGTCT CCACCCTCACCACCCAGTTCACCGGCGTGTTCCGGGACGACCCGGCCGAGCAGGTGCGCTTCATCACCCTGGTGCGCTCC AAGTCCTGA
Upstream 100 bases:
>100_bases GAGCGACACCGCGCATGCGTAGCCGACGACCGGTGACACTCCCGCTTCCACGGGCTGGCCCTGATGGGCTCTGCCGGGGG CGGGTCGAACGGAGTTGGGC
Downstream 100 bases:
>100_bases CTGCAGGTTCTGAAGGCGGGTCCTGACCACCGGTCCTGACCGGGCGTACTTGACGTTCAAACTTCATCGGGGCGTTCCTG CCATGCAGGGACGCCCCTTT
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MDAVVKLFKAQAENEERERKLKAEAKAASKAAARPDGAPPAPKIHPPLPDGTPRPSRQEAEAAVRTLLAYIGEDPAREGL LDTPKRVVKAYDELFSGYGEDSEELLERTFGEIGTFDDFVLVRDIPFHSHCEHHMVPFVGKAHIAYFPVERVVGLSKIAR VVDIFARRLQTQEHLTSQITTTLDEGLRPRGVAVMIEAEHMCMSMRGITKQGVSTLTTQFTGVFRDDPAEQVRFITLVRS KS
Sequences:
>Translated_242_residues MDAVVKLFKAQAENEERERKLKAEAKAASKAAARPDGAPPAPKIHPPLPDGTPRPSRQEAEAAVRTLLAYIGEDPAREGL LDTPKRVVKAYDELFSGYGEDSEELLERTFGEIGTFDDFVLVRDIPFHSHCEHHMVPFVGKAHIAYFPVERVVGLSKIAR VVDIFARRLQTQEHLTSQITTTLDEGLRPRGVAVMIEAEHMCMSMRGITKQGVSTLTTQFTGVFRDDPAEQVRFITLVRS KS >Mature_242_residues MDAVVKLFKAQAENEERERKLKAEAKAASKAAARPDGAPPAPKIHPPLPDGTPRPSRQEAEAAVRTLLAYIGEDPAREGL LDTPKRVVKAYDELFSGYGEDSEELLERTFGEIGTFDDFVLVRDIPFHSHCEHHMVPFVGKAHIAYFPVERVVGLSKIAR VVDIFARRLQTQEHLTSQITTTLDEGLRPRGVAVMIEAEHMCMSMRGITKQGVSTLTTQFTGVFRDDPAEQVRFITLVRS KS
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=220, Percent_Identity=45.9090909090909, Blast_Score=186, Evalue=1e-47, Organism=Homo sapiens, GI4503949, Length=220, Percent_Identity=45.9090909090909, Blast_Score=186, Evalue=1e-47, Organism=Homo sapiens, GI66932970, Length=189, Percent_Identity=42.8571428571429, Blast_Score=140, Evalue=1e-33, Organism=Homo sapiens, GI66932972, Length=178, Percent_Identity=44.9438202247191, Blast_Score=138, Evalue=3e-33, Organism=Escherichia coli, GI1788476, Length=198, Percent_Identity=37.3737373737374, Blast_Score=114, Evalue=8e-27, Organism=Caenorhabditis elegans, GI17560486, Length=180, Percent_Identity=48.8888888888889, Blast_Score=184, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6321706, Length=186, Percent_Identity=46.7741935483871, Blast_Score=167, Evalue=1e-42, Organism=Drosophila melanogaster, GI24656782, Length=180, Percent_Identity=47.2222222222222, Blast_Score=164, Evalue=5e-41, Organism=Drosophila melanogaster, GI24656791, Length=180, Percent_Identity=47.2222222222222, Blast_Score=163, Evalue=7e-41, Organism=Drosophila melanogaster, GI24656796, Length=180, Percent_Identity=47.2222222222222, Blast_Score=163, Evalue=8e-41,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 26935; Mature: 26935
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAVVKLFKAQAENEERERKLKAEAKAASKAAARPDGAPPAPKIHPPLPDGTPRPSRQEA CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHH EAAVRTLLAYIGEDPAREGLLDTPKRVVKAYDELFSGYGEDSEELLERTFGEIGTFDDFV HHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEE LVRDIPFHSHCEHHMVPFVGKAHIAYFPVERVVGLSKIARVVDIFARRLQTQEHLTSQIT EEECCCCHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TTLDEGLRPRGVAVMIEAEHMCMSMRGITKQGVSTLTTQFTGVFRDDPAEQVRFITLVRS HHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC KS CC >Mature Secondary Structure MDAVVKLFKAQAENEERERKLKAEAKAASKAAARPDGAPPAPKIHPPLPDGTPRPSRQEA CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHH EAAVRTLLAYIGEDPAREGLLDTPKRVVKAYDELFSGYGEDSEELLERTFGEIGTFDDFV HHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEE LVRDIPFHSHCEHHMVPFVGKAHIAYFPVERVVGLSKIARVVDIFARRLQTQEHLTSQIT EEECCCCHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TTLDEGLRPRGVAVMIEAEHMCMSMRGITKQGVSTLTTQFTGVFRDDPAEQVRFITLVRS HHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC KS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA