| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154245266
Identifier: 154245266
GI number: 154245266
Start: 1513196
End: 1513834
Strand: Direct
Name: 154245266
Synonym: Xaut_1318
Alternate gene names: NA
Gene position: 1513196-1513834 (Clockwise)
Preceding gene: 154245265
Following gene: 154245273
Centisome position: 28.5
GC content: 67.45
Gene sequence:
>639_bases ATGGCCGAGATTCGAGACGAAGACGCGCTCCGTTGCCTTTATGGCCAACCGGCGGGGCGCAGTGTCGCCAAGCAGCTCGA CCGGCTGGATCGCCATTGCCTGGATTTCATCGCGCTGAGCCCCTTCGTGCTGATCGCCACCGCGGACGCACAGGGCGCCA CCGATGTCTCCCCGCGCGGCGACCTGCCGGGCTTCGTGGCGGCGCGCGCCCACGACCTCGTCATCCCCGATCGTCCCGGC AACAACCGGCTGGATTCCCTAACCAATATCCTCGCCACCGGGCGGGTAGGCCTGCTTTTCCTCATTCCCGGCGTGGACGA GACCCTGCGCGTCAATGGGCGCGCCACCATTCATGACGATGCCGAGCTGACGGCGCGTTTCGCTGTGGGCGGCAAGGCGC CGCGCACGGTGCTGAAGGTGGAGGTGGAGGAGGCCTATCTCCACTGCGCGAAGGCCTTCATGCGCTCGCGCCTGTGGGAC GTTGAGGCGCAGGTGGCGCGCTCGGTGCTGCCCACCATGGGCGAGATGCTGCGCGACCAGATCGCCGGCAAGAGCGGCGA CACGTCCGGATCGTCCGTGGTCGGCGAGGCGGAAAGCCAGGAGGCGATGGTGGAGCGCTATCGCGGCATTCTGTATTGA
Upstream 100 bases:
>100_bases CTTCGCGGCGGACCGGGTGCAACTGGTGTTCAAGGCGTGAGCGCATCCGCGCCGGTGGCGGTGCGCGGCAAGCTCTTCAG GACAGCGTAAGGACGACCCC
Downstream 100 bases:
>100_bases GCGCGCCTCACGGCTCCAGCCGGGTCTTGCCGATGATGGAGAAGCGCAGGCGCGAGGAGATGAAGTCGATCACCGCCACC ATCACCAGCATCATCAGGAT
Product: pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
Products: NA
Alternate protein names: Phosphohydrolase; Pyridoxamine 5-Phosphate Oxidase; Pyridoxamine 5-Phosphate Oxidase-Like Protein; Pyridoxamine 5-Phosphate Oxidase-Related Protein; NTP Pyrophosphohydrolase; Pyridoxine Biosynthesis Protein; Phenylacetate-CoA Oxygenase/Reductase PaaK Subunit; Transcriptional Regulator AraC Family; Pyridoxamine 5-Phosphate Oxidase Family; Fmn Flavoprotein; Pyridoxamine 5\-Phosphate Oxidase Family Protein; Hydrolase; Pyridoxamine 5-Phosphate Oxidase-Related
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MAEIRDEDALRCLYGQPAGRSVAKQLDRLDRHCLDFIALSPFVLIATADAQGATDVSPRGDLPGFVAARAHDLVIPDRPG NNRLDSLTNILATGRVGLLFLIPGVDETLRVNGRATIHDDAELTARFAVGGKAPRTVLKVEVEEAYLHCAKAFMRSRLWD VEAQVARSVLPTMGEMLRDQIAGKSGDTSGSSVVGEAESQEAMVERYRGILY
Sequences:
>Translated_212_residues MAEIRDEDALRCLYGQPAGRSVAKQLDRLDRHCLDFIALSPFVLIATADAQGATDVSPRGDLPGFVAARAHDLVIPDRPG NNRLDSLTNILATGRVGLLFLIPGVDETLRVNGRATIHDDAELTARFAVGGKAPRTVLKVEVEEAYLHCAKAFMRSRLWD VEAQVARSVLPTMGEMLRDQIAGKSGDTSGSSVVGEAESQEAMVERYRGILY >Mature_211_residues AEIRDEDALRCLYGQPAGRSVAKQLDRLDRHCLDFIALSPFVLIATADAQGATDVSPRGDLPGFVAARAHDLVIPDRPGN NRLDSLTNILATGRVGLLFLIPGVDETLRVNGRATIHDDAELTARFAVGGKAPRTVLKVEVEEAYLHCAKAFMRSRLWDV EAQVARSVLPTMGEMLRDQIAGKSGDTSGSSVVGEAESQEAMVERYRGILY
Specific function: Unknown
COG id: COG3576
COG function: function code R; Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23002; Mature: 22871
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEIRDEDALRCLYGQPAGRSVAKQLDRLDRHCLDFIALSPFVLIATADAQGATDVSPRG CCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCC DLPGFVAARAHDLVIPDRPGNNRLDSLTNILATGRVGLLFLIPGVDETLRVNGRATIHDD CCCCHHHHCCCCEECCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCEEEECCCEEEECC AELTARFAVGGKAPRTVLKVEVEEAYLHCAKAFMRSRLWDVEAQVARSVLPTMGEMLRDQ HHHHEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH IAGKSGDTSGSSVVGEAESQEAMVERYRGILY HCCCCCCCCCCCEECCCHHHHHHHHHHCCCCC >Mature Secondary Structure AEIRDEDALRCLYGQPAGRSVAKQLDRLDRHCLDFIALSPFVLIATADAQGATDVSPRG CCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCC DLPGFVAARAHDLVIPDRPGNNRLDSLTNILATGRVGLLFLIPGVDETLRVNGRATIHDD CCCCHHHHCCCCEECCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCEEEECCCEEEECC AELTARFAVGGKAPRTVLKVEVEEAYLHCAKAFMRSRLWDVEAQVARSVLPTMGEMLRDQ HHHHEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH IAGKSGDTSGSSVVGEAESQEAMVERYRGILY HCCCCCCCCCCCEECCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA