| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is mrr [H]
Identifier: 154245042
GI number: 154245042
Start: 1262163
End: 1263095
Strand: Reverse
Name: mrr [H]
Synonym: Xaut_1094
Alternate gene names: 154245042
Gene position: 1263095-1262163 (Counterclockwise)
Preceding gene: 154245043
Following gene: 154245041
Centisome position: 23.79
GC content: 68.38
Gene sequence:
>933_bases ATGCCCATTCCCGATTATCAGACCCTCATGCTGCCTCTTCTGAAGATCGCTGCCGAGGGCGAGACGCGCATTCCCGAACT GGAAGAGCGCATCTGCAACGACTTCGGCCTGAGCGAGGCGGAGCGGGAGGCGCTGCTCCCCTCCGGCCGGCAGAAGGTGA TCCATAATCGCCTGCACTGGTCGAAATTCTACCTCACCCGCGCCGGCCTCATGGACGTGCCGAGCCGCGGCCGCTTCGTG GCCAGCCCCGCCGGGCGCGAGTTGCTCGCGCGGAACCCGCCTCGCATCGACATCCCCTTGCTGGAGACCTATCCGGCCTT CCGCGAGTTCTATCGCAATGCCCGCGAAGGCGCGGGGGAGAACGAAGTCGGCGCCGAGGTGGCGCCGCCGCCCGTCCCCG CCACCGTGACGCCGGAAGAGCAGGTGGAGGCAGCATACGCCGCCCTGCAGGCCGCGCTGCGGCAGGACCTCCTCGCCCGC ATCCTCCAGAACCCGCCCGCCTTCTTCGAGCGCGTCATCGTTACCCTGCTCGTGGCCATGGGCTATGGCGGCTCGCACCG CGACGCTGCCCAGCAGCTCGGCCGCAGCGGCGACGGCGGGGTCGATGGCGTCATCAACGAGGACCGCCTCGGCCTTGATC GCGTCTATGTGCAGGCCAAGCGCTATGCCCCCGGCAATGCGGTTGGCCGCCCGGAGGTGCAGGGCTTCGTCGGCAGCCTC GTGGGCCTCGGCGCCACCAAGGGCGTGTTCGTCACCACCTCCGCCTTCAGCACTCAGGCGCGGGATTTCGTGCGCCACCT CACCCAACGCGTCATCCTCATCGACGGCCAGCAACTTGCCGACCTGATGATCGAGCACAACGTCGGCGTCCGCCTCACCC GCGCCGTCGAGTTCAAGCGCCTGGACGAGGACTTCTTCGCCGACGAGGAGTGA
Upstream 100 bases:
>100_bases GCCGACGAGCCGGCGAGCGTGCTGCTTGAGCGCATCCGGGCAGAGCGCGGCGCGGCTCCCAAGGCCCGGCGCGGGCGGCG GCCGGCGGCGGAGGCGTGAG
Downstream 100 bases:
>100_bases TTTTCCCGCGTCCGTTTCTGCTGATCTGTTTCTTTGAGAAGGGCGCCCCCGAGCAGCCCAAGCAGGGGAGGCGAATGAGA GCGACTGGACTACGGCTCGC
Product: restriction endonuclease
Products: NA
Alternate protein names: EcoKMrr [H]
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MPIPDYQTLMLPLLKIAAEGETRIPELEERICNDFGLSEAEREALLPSGRQKVIHNRLHWSKFYLTRAGLMDVPSRGRFV ASPAGRELLARNPPRIDIPLLETYPAFREFYRNAREGAGENEVGAEVAPPPVPATVTPEEQVEAAYAALQAALRQDLLAR ILQNPPAFFERVIVTLLVAMGYGGSHRDAAQQLGRSGDGGVDGVINEDRLGLDRVYVQAKRYAPGNAVGRPEVQGFVGSL VGLGATKGVFVTTSAFSTQARDFVRHLTQRVILIDGQQLADLMIEHNVGVRLTRAVEFKRLDEDFFADEE
Sequences:
>Translated_310_residues MPIPDYQTLMLPLLKIAAEGETRIPELEERICNDFGLSEAEREALLPSGRQKVIHNRLHWSKFYLTRAGLMDVPSRGRFV ASPAGRELLARNPPRIDIPLLETYPAFREFYRNAREGAGENEVGAEVAPPPVPATVTPEEQVEAAYAALQAALRQDLLAR ILQNPPAFFERVIVTLLVAMGYGGSHRDAAQQLGRSGDGGVDGVINEDRLGLDRVYVQAKRYAPGNAVGRPEVQGFVGSL VGLGATKGVFVTTSAFSTQARDFVRHLTQRVILIDGQQLADLMIEHNVGVRLTRAVEFKRLDEDFFADEE >Mature_309_residues PIPDYQTLMLPLLKIAAEGETRIPELEERICNDFGLSEAEREALLPSGRQKVIHNRLHWSKFYLTRAGLMDVPSRGRFVA SPAGRELLARNPPRIDIPLLETYPAFREFYRNAREGAGENEVGAEVAPPPVPATVTPEEQVEAAYAALQAALRQDLLARI LQNPPAFFERVIVTLLVAMGYGGSHRDAAQQLGRSGDGGVDGVINEDRLGLDRVYVQAKRYAPGNAVGRPEVQGFVGSLV GLGATKGVFVTTSAFSTQARDFVRHLTQRVILIDGQQLADLMIEHNVGVRLTRAVEFKRLDEDFFADEE
Specific function: Involved in the acceptance of foreign DNA which is modified. Restricts both adenine- and cytosine-methylated DNA [H]
COG id: COG1715
COG function: function code V; Restriction endonuclease
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790811, Length=310, Percent_Identity=38.0645161290323, Blast_Score=173, Evalue=2e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011856 - InterPro: IPR011335 - InterPro: IPR007560 [H]
Pfam domain/function: PF04471 Mrr_cat [H]
EC number: NA
Molecular weight: Translated: 34200; Mature: 34069
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIPDYQTLMLPLLKIAAEGETRIPELEERICNDFGLSEAEREALLPSGRQKVIHNRLHW CCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHH SKFYLTRAGLMDVPSRGRFVASPAGRELLARNPPRIDIPLLETYPAFREFYRNAREGAGE HHHHHHHCCCCCCCCCCCEEECCCCHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHCCCCC NEVGAEVAPPPVPATVTPEEQVEAAYAALQAALRQDLLARILQNPPAFFERVIVTLLVAM CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH GYGGSHRDAAQQLGRSGDGGVDGVINEDRLGLDRVYVQAKRYAPGNAVGRPEVQGFVGSL CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHH VGLGATKGVFVTTSAFSTQARDFVRHLTQRVILIDGQQLADLMIEHNVGVRLTRAVEFKR HHCCCCCCEEEEECHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHCCCCEEEEHHHHHHH LDEDFFADEE HCHHHCCCCC >Mature Secondary Structure PIPDYQTLMLPLLKIAAEGETRIPELEERICNDFGLSEAEREALLPSGRQKVIHNRLHW CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHH SKFYLTRAGLMDVPSRGRFVASPAGRELLARNPPRIDIPLLETYPAFREFYRNAREGAGE HHHHHHHCCCCCCCCCCCEEECCCCHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHCCCCC NEVGAEVAPPPVPATVTPEEQVEAAYAALQAALRQDLLARILQNPPAFFERVIVTLLVAM CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH GYGGSHRDAAQQLGRSGDGGVDGVINEDRLGLDRVYVQAKRYAPGNAVGRPEVQGFVGSL CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHH VGLGATKGVFVTTSAFSTQARDFVRHLTQRVILIDGQQLADLMIEHNVGVRLTRAVEFKR HHCCCCCCEEEEECHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHCCCCEEEEHHHHHHH LDEDFFADEE HCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1650347; 7610040; 9278503 [H]