Click here to switch to the map view.

The map label for this gene is 154245041

Identifier: 154245041

GI number: 154245041

Start: 1261637

End: 1261891

Strand: Reverse

Name: 154245041

Synonym: Xaut_1093

Alternate gene names: NA

Gene position: 1261891-1261637 (Counterclockwise)

Preceding gene: 154245042

Following gene: 154245038

Centisome position: 23.77

GC content: 60.78

Gene sequence:

>255_bases
ATGCGAGCCTCACGGTTCACAGAGGAACAGATCATTGGGATGCTGAAGGAGCAGGAGGCGGGCGCGAAGACCGCTGAGGT
CTGCCGCAAGCACGGCATCTCCTCGGCGACCTTCTACAAGTTCAAGGCCAAGTACGGGGGCATGGATGTGTCCGATGCCC
GCCGGCTGAAGGCGCTTGAGGAGGAGAACGCGCGTCTGAAGAAGCTGCTGGCCGAGCAGATGCTGGACAACGCGATCCTG
AGGGATGTCAGCTAA

Upstream 100 bases:

>100_bases
GCCTTCGCGATGACCTGTGACCTGTGACCTGTGACCTGTGACCTGAGCCCCTGATCCTCCTCCAGATTTAGGTAGAGTCC
GTCGATCATGGAGACGGACG

Downstream 100 bases:

>100_bases
AAAAAATGGTGACGCCTGATGCAAGGCGCAAAGCCGTGGCTCATGCCTGTGCCGCGCACGGGGTGGGCCAGCGTCGGGCG
TGCCAGGCGCTGGGCGTCGA

Product: transposase IS3/IS911 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MRASRFTEEQIIGMLKEQEAGAKTAEVCRKHGISSATFYKFKAKYGGMDVSDARRLKALEEENARLKKLLAEQMLDNAIL
RDVS

Sequences:

>Translated_84_residues
MRASRFTEEQIIGMLKEQEAGAKTAEVCRKHGISSATFYKFKAKYGGMDVSDARRLKALEEENARLKKLLAEQMLDNAIL
RDVS
>Mature_84_residues
MRASRFTEEQIIGMLKEQEAGAKTAEVCRKHGISSATFYKFKAKYGGMDVSDARRLKALEEENARLKKLLAEQMLDNAIL
RDVS

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR002514 [H]

Pfam domain/function: PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 9494; Mature: 9494

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRASRFTEEQIIGMLKEQEAGAKTAEVCRKHGISSATFYKFKAKYGGMDVSDARRLKALE
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHH
EENARLKKLLAEQMLDNAILRDVS
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRASRFTEEQIIGMLKEQEAGAKTAEVCRKHGISSATFYKFKAKYGGMDVSDARRLKALE
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHH
EENARLKKLLAEQMLDNAILRDVS
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2544911 [H]