| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is hyi [C]
Identifier: 154244976
GI number: 154244976
Start: 1178823
End: 1179626
Strand: Reverse
Name: hyi [C]
Synonym: Xaut_1026
Alternate gene names: 154244976
Gene position: 1179626-1178823 (Counterclockwise)
Preceding gene: 154244977
Following gene: 154244975
Centisome position: 22.22
GC content: 68.03
Gene sequence:
>804_bases ATGCCGCGCTTTGCCGCCAACCTCACCATGATGTTCACCGAGTGGTCGTTCCTCGACCGCTTCGCCGCCGCCGCCGATGC CGGCTTCACCGCGGTGGAATTCCTCTTCCCCTACGAGCATGCGCCGGAAGCCGTGGGCGAACGCCTCGCCCGCAACGGCC TGACCCAGGCCCTGTTCAACCTGCCCCCCGGCGATTGGGCGGCTGGCGAGCGCGGCATCGCTGCCTTCCCCGAGCGCTTC GACGAACTGAAGGCAGGCGTTGCGACCGGCCTCACCTATGCCGCAGCCACCGGCGTGAAGCGCCTGCATCTCATGTCCGG CCTTGCCGACCGCGCCGACCCCAAGGCCCGCGCCGCCTATCGCGAGGCGGTGGTCTACGCCGCCGGCGCGCTGGCGGAGA AGGGTCTCGACCTGGTGCTGGAGCCCATCAACGGCCGCAACATGCCGGGCTATTTCCTCAACGATTTCGCCTTCACCGAG GCGCTCATCGCCGAGCTGGGCCTGCCCAACCTGAAGCTCCAGTTCGACATCTATCACTGCCAGATCATCCATGGCGACGT GACCATGCGGCTGCGCCAGCTCATGCCCATCACCGGCCATGTGCAGATCGCCAGCGTGCCGTCCCGCAACGAGCCGGACG GCGAGGAGCTGAACTATCCGTTCCTGTTCGCGGAGCTGGATCGCCTGGGATATGACGGCTTCGTGGGCTGCGAATACAAC CCGCGCGCCGGCACGCTGAGCGGCCTGAGCTGGTTCGCGCCCTATGCCGCCGCCCCGGCCCTCCAGGCGGGAGCGAACGG ATGA
Upstream 100 bases:
>100_bases AACCCTGCTTGCGTCCCTGCGCGGATTGGTGCGTCCTTCACGCCGCACCGACCGCCGCGACCCGACCTTTCGGAAGATCC CACCTTTTCGGACAATTCCC
Downstream 100 bases:
>100_bases CCCTCGCCCTCGGCACCATCGCCGACGACTATACCGGCGCCTCCGACCTCGCCAACACCTTGGCCAAGAACGGCCTGCGC ACCGTGCAGACCGTGGGCAT
Product: hydroxypyruvate isomerase
Products: 2-hydroxy-3-oxopropanoate
Alternate protein names: ORF4 [H]
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MPRFAANLTMMFTEWSFLDRFAAAADAGFTAVEFLFPYEHAPEAVGERLARNGLTQALFNLPPGDWAAGERGIAAFPERF DELKAGVATGLTYAAATGVKRLHLMSGLADRADPKARAAYREAVVYAAGALAEKGLDLVLEPINGRNMPGYFLNDFAFTE ALIAELGLPNLKLQFDIYHCQIIHGDVTMRLRQLMPITGHVQIASVPSRNEPDGEELNYPFLFAELDRLGYDGFVGCEYN PRAGTLSGLSWFAPYAAAPALQAGANG
Sequences:
>Translated_267_residues MPRFAANLTMMFTEWSFLDRFAAAADAGFTAVEFLFPYEHAPEAVGERLARNGLTQALFNLPPGDWAAGERGIAAFPERF DELKAGVATGLTYAAATGVKRLHLMSGLADRADPKARAAYREAVVYAAGALAEKGLDLVLEPINGRNMPGYFLNDFAFTE ALIAELGLPNLKLQFDIYHCQIIHGDVTMRLRQLMPITGHVQIASVPSRNEPDGEELNYPFLFAELDRLGYDGFVGCEYN PRAGTLSGLSWFAPYAAAPALQAGANG >Mature_266_residues PRFAANLTMMFTEWSFLDRFAAAADAGFTAVEFLFPYEHAPEAVGERLARNGLTQALFNLPPGDWAAGERGIAAFPERFD ELKAGVATGLTYAAATGVKRLHLMSGLADRADPKARAAYREAVVYAAGALAEKGLDLVLEPINGRNMPGYFLNDFAFTEA LIAELGLPNLKLQFDIYHCQIIHGDVTMRLRQLMPITGHVQIASVPSRNEPDGEELNYPFLFAELDRLGYDGFVGCEYNP RAGTLSGLSWFAPYAAAPALQAGANG
Specific function: Catalyzes The Reversible Isomerization Between Hydroxypyruvate And 2-Hydroxy-3-Oxopropanoate (Also Termed Tartronate Semialdehyde). [C]
COG id: COG3622
COG function: function code G; Hydroxypyruvate isomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hyi family [H]
Homologues:
Organism=Homo sapiens, GI300068962, Length=262, Percent_Identity=45.8015267175573, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI300068964, Length=243, Percent_Identity=44.8559670781893, Blast_Score=180, Evalue=1e-45, Organism=Escherichia coli, GI1786718, Length=257, Percent_Identity=43.9688715953307, Blast_Score=220, Evalue=9e-59, Organism=Escherichia coli, GI1789095, Length=254, Percent_Identity=42.9133858267717, Blast_Score=207, Evalue=6e-55, Organism=Caenorhabditis elegans, GI17552022, Length=240, Percent_Identity=36.6666666666667, Blast_Score=161, Evalue=4e-40, Organism=Drosophila melanogaster, GI17530883, Length=257, Percent_Identity=32.6848249027237, Blast_Score=143, Evalue=1e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013022 - InterPro: IPR012307 [H]
Pfam domain/function: PF01261 AP_endonuc_2 [H]
EC number: 5.3.1.22
Molecular weight: Translated: 28995; Mature: 28864
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRFAANLTMMFTEWSFLDRFAAAADAGFTAVEFLFPYEHAPEAVGERLARNGLTQALFN CCCHHCCEEEEEHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC LPPGDWAAGERGIAAFPERFDELKAGVATGLTYAAATGVKRLHLMSGLADRADPKARAAY CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH REAVVYAAGALAEKGLDLVLEPINGRNMPGYFLNDFAFTEALIAELGLPNLKLQFDIYHC HHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEE QIIHGDVTMRLRQLMPITGHVQIASVPSRNEPDGEELNYPFLFAELDRLGYDGFVGCEYN EEEECHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCEECCCCC PRAGTLSGLSWFAPYAAAPALQAGANG CCCCCCCCHHHHHHHHHCCHHHCCCCC >Mature Secondary Structure PRFAANLTMMFTEWSFLDRFAAAADAGFTAVEFLFPYEHAPEAVGERLARNGLTQALFN CCHHCCEEEEEHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC LPPGDWAAGERGIAAFPERFDELKAGVATGLTYAAATGVKRLHLMSGLADRADPKARAAY CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH REAVVYAAGALAEKGLDLVLEPINGRNMPGYFLNDFAFTEALIAELGLPNLKLQFDIYHC HHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEE QIIHGDVTMRLRQLMPITGHVQIASVPSRNEPDGEELNYPFLFAELDRLGYDGFVGCEYN EEEECHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCEECCCCC PRAGTLSGLSWFAPYAAAPALQAGANG CCCCCCCCHHHHHHHHHCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 10 {hydroxypyruvate}} [C]
Substrates: hydroxypyruvate
Specific reaction: hydroxypyruvate = 2-hydroxy-3-oxopropanoate; Other Name(s): hydroxypyruvate ketol-isomerase
General reaction: Intramolecular oxidoreduction; Isomerization [C]
Inhibitor: Cu2+; Fe2+; Hydroxy l amine; Iodoacetate; NaCN [C]
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7851418 [H]