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The map label for this gene is ycdI [C]

Identifier: 154244256

GI number: 154244256

Start: 306685

End: 307275

Strand: Reverse

Name: ycdI [C]

Synonym: Xaut_0299

Alternate gene names: 154244256

Gene position: 307275-306685 (Counterclockwise)

Preceding gene: 154244260

Following gene: 154244254

Centisome position: 5.79

GC content: 66.5

Gene sequence:

>591_bases
ATGACCACCAAGATCGACCAGGCCGCCATCGACCGCCTGTTCCTCGAAGCCCGCTCGCAGAACGGCTGGACCGACCAGCC
GGTGAGCGAGGCGGAGATCCGCGCGCTCTATGATCTGGTCAAATATGGCCCCACCTCGGCCAACACCCAGCCTGCCCGCT
TCGTCTTCGTCACCAGCCCCGAGGCCAAGGAGCGCCTGCGCCCGGCCCTGTCGCCCGGCAATGTGAAGGCGCTGGCGGCG
CCGGTGATCGTCCTCATCGGCTACGCCCTCGATTTTCACGACAAGATTCCCGAAGTGTTCCCGCACAATCCGGGCTTCCG
CGACATGTTCGTGAACAATCCGGCGGCCATCGAGCCCCACGCCTTCCGCAATTCGTCGCTGCAGGGCGCCTATCTCATCC
TCGCGGCGCGGGCGCTGGGGCTGGATGTGGGTCCCATGTCCGGCTTCGACGCGGCCAAGGTGGATGCTGAATTCTTCCCC
GGCGGCACGGTGAAGACCAATTTCATCGCCGCCATCGGCCACGGCGATCCCTCGAAGGTGATGCCCCGCCTGCCGCGCCT
CGCCTTCGCCGACGCCGCGCAGATCGTCTGA

Upstream 100 bases:

>100_bases
CCCCGCCCGCACCGTCCTACGTCCAGGGCGACACTCCCCGACCCGGGACGCGCGGCATCAGGTTCTCGGCGCGCCACGGC
TGCCCCAAGGACATTTCAGC

Downstream 100 bases:

>100_bases
TACCCACGCCGCCGAGATTGACCCATCAGCATGGGTATAAGCCCGCGCGGTGTTCGGGCGCCTCCTCTCGGCGCCGGTCA
AGGACCGGGACCGTTGGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MTTKIDQAAIDRLFLEARSQNGWTDQPVSEAEIRALYDLVKYGPTSANTQPARFVFVTSPEAKERLRPALSPGNVKALAA
PVIVLIGYALDFHDKIPEVFPHNPGFRDMFVNNPAAIEPHAFRNSSLQGAYLILAARALGLDVGPMSGFDAAKVDAEFFP
GGTVKTNFIAAIGHGDPSKVMPRLPRLAFADAAQIV

Sequences:

>Translated_196_residues
MTTKIDQAAIDRLFLEARSQNGWTDQPVSEAEIRALYDLVKYGPTSANTQPARFVFVTSPEAKERLRPALSPGNVKALAA
PVIVLIGYALDFHDKIPEVFPHNPGFRDMFVNNPAAIEPHAFRNSSLQGAYLILAARALGLDVGPMSGFDAAKVDAEFFP
GGTVKTNFIAAIGHGDPSKVMPRLPRLAFADAAQIV
>Mature_195_residues
TTKIDQAAIDRLFLEARSQNGWTDQPVSEAEIRALYDLVKYGPTSANTQPARFVFVTSPEAKERLRPALSPGNVKALAAP
VIVLIGYALDFHDKIPEVFPHNPGFRDMFVNNPAAIEPHAFRNSSLQGAYLILAARALGLDVGPMSGFDAAKVDAEFFPG
GTVKTNFIAAIGHGDPSKVMPRLPRLAFADAAQIV

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family. HadB/RutE subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787243, Length=197, Percent_Identity=50.253807106599, Blast_Score=209, Evalue=9e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 21172; Mature: 21041

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTKIDQAAIDRLFLEARSQNGWTDQPVSEAEIRALYDLVKYGPTSANTQPARFVFVTSP
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECC
EAKERLRPALSPGNVKALAAPVIVLIGYALDFHDKIPEVFPHNPGFRDMFVNNPAAIEPH
CHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEECCCCCCCCH
AFRNSSLQGAYLILAARALGLDVGPMSGFDAAKVDAEFFPGGTVKTNFIAAIGHGDPSKV
HCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHCCHHHCCCCCEEEEEEEEECCCCHHHH
MPRLPRLAFADAAQIV
HHHCCHHHHHHHHHCC
>Mature Secondary Structure 
TTKIDQAAIDRLFLEARSQNGWTDQPVSEAEIRALYDLVKYGPTSANTQPARFVFVTSP
CCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECC
EAKERLRPALSPGNVKALAAPVIVLIGYALDFHDKIPEVFPHNPGFRDMFVNNPAAIEPH
CHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEECCCCCCCCH
AFRNSSLQGAYLILAARALGLDVGPMSGFDAAKVDAEFFPGGTVKTNFIAAIGHGDPSKV
HCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHCCHHHCCCCCEEEEEEEEECCCCHHHH
MPRLPRLAFADAAQIV
HHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Fmn (Potential) [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA