| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154244254
Identifier: 154244254
GI number: 154244254
Start: 305228
End: 305734
Strand: Reverse
Name: 154244254
Synonym: Xaut_0297
Alternate gene names: NA
Gene position: 305734-305228 (Counterclockwise)
Preceding gene: 154244256
Following gene: 154244253
Centisome position: 5.76
GC content: 72.78
Gene sequence:
>507_bases ATGACCACGACCGCAACGCCGCGCCGCAGCCGGGAGCCCGTCCACCGCCGCAAGTTCCTGGTGGTGGTGGACGACACCCC CGAATGCGACCGCGCCATCTATTTCGCCGCCCGCCGCGCCGCCGGCACGCAAGGCGGCATGGTCCTGCTCGGCGTGCTGG AGCTGGAGGGCGTGGCCCAGCAATGGCTCGGCGTCGCCGACCTCATGCGCGCGGAAGCCCATGAGGAGATGGAGGCGCGG CTGCAGAAGTTCGCTGCCCGCGCCCGCCAGGTGGCCGGCATCTCGCCCGAGCTGGTGATCAAGGAAGGGTCCCCGGCCGA GGCCATCGCCCGGACGATCGCGGAGGATCACGACATCGCCATCCTGGTGCTGGCGGCCGGTGTCGGCAAGGACGGTCCCG GCCCGCTGGTCACCGTGCTGGCGGCCGGCCATGCGGCGCGGTTCCCGGTGCCCATCACCATCGTGCCCGGCGCGCTCACC GACGCCGAGCTGGACGCCATCGCCTGA
Upstream 100 bases:
>100_bases GTCTGCCGGTTCCTCGCGCCCCACGGCGCCCCATCTGGGCCTTCTGAATGCGCCGTCCTTCCCATCCCCCGGTCCGCCCG GCGCCGCGCCGGCCCCTGCC
Downstream 100 bases:
>100_bases GCCCGGGGAGCCGGCGCCGCCCCGAACCTGGCTGGGAAACCTGAGCGCAACCGCGCGCAGGGAAACCCTGACGCTGCGCT TGCGCCTTTGGCATTTCCGT
Product: UspA domain-containing protein
Products: NA
Alternate protein names: Universal Stress Family Protein; UspA Domain Protein; Universal Stress Protein UspA; Universal Stress Protein; Universal Stress Protein Family; UspA Protein
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MTTTATPRRSREPVHRRKFLVVVDDTPECDRAIYFAARRAAGTQGGMVLLGVLELEGVAQQWLGVADLMRAEAHEEMEAR LQKFAARARQVAGISPELVIKEGSPAEAIARTIAEDHDIAILVLAAGVGKDGPGPLVTVLAAGHAARFPVPITIVPGALT DAELDAIA
Sequences:
>Translated_168_residues MTTTATPRRSREPVHRRKFLVVVDDTPECDRAIYFAARRAAGTQGGMVLLGVLELEGVAQQWLGVADLMRAEAHEEMEAR LQKFAARARQVAGISPELVIKEGSPAEAIARTIAEDHDIAILVLAAGVGKDGPGPLVTVLAAGHAARFPVPITIVPGALT DAELDAIA >Mature_167_residues TTTATPRRSREPVHRRKFLVVVDDTPECDRAIYFAARRAAGTQGGMVLLGVLELEGVAQQWLGVADLMRAEAHEEMEARL QKFAARARQVAGISPELVIKEGSPAEAIARTIAEDHDIAILVLAAGVGKDGPGPLVTVLAAGHAARFPVPITIVPGALTD AELDAIA
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17777; Mature: 17646
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTATPRRSREPVHRRKFLVVVDDTPECDRAIYFAARRAAGTQGGMVLLGVLELEGVAQ CCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHH QWLGVADLMRAEAHEEMEARLQKFAARARQVAGISPELVIKEGSPAEAIARTIAEDHDIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCCEE ILVLAAGVGKDGPGPLVTVLAAGHAARFPVPITIVPGALTDAELDAIA EEEEEECCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCHHHCC >Mature Secondary Structure TTTATPRRSREPVHRRKFLVVVDDTPECDRAIYFAARRAAGTQGGMVLLGVLELEGVAQ CCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHH QWLGVADLMRAEAHEEMEARLQKFAARARQVAGISPELVIKEGSPAEAIARTIAEDHDIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCCEE ILVLAAGVGKDGPGPLVTVLAAGHAARFPVPITIVPGALTDAELDAIA EEEEEECCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA