| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154244260
Identifier: 154244260
GI number: 154244260
Start: 310553
End: 311353
Strand: Reverse
Name: 154244260
Synonym: Xaut_0303
Alternate gene names: NA
Gene position: 311353-310553 (Counterclockwise)
Preceding gene: 154244261
Following gene: 154244256
Centisome position: 5.86
GC content: 70.91
Gene sequence:
>801_bases TTGAGGGGAAGATGCGGTGGTAACGTCGCCCCGGTTGCCGCCATGCTGTTTCGCCGTCAGGACCCAAAGCCGCCCGCGCA GCGGGCGGCTGAATGGATTGAGCTGTTGCTCGATGACGGACCCCTGCGCGTGGCGGTACGTCGAAACCCCCAGGCGCGCC GGCTCACCCTCAGGGTCCGGGCCGCCGCGCGGGACGTGACACTCACCGCCCCGCCCCACGTGCCCCTCGCCTTCGCCCGC GATTTCGTGCAGCGCCATCGCGAATGGGTGCGCGTGCGCCTCGTGCGCCTGCCGGAGAAGGTGCTGTTCGAGCCCGGCGC GCTGATCCCGCTCCACGGCACACCCCATCGCATCGTCCATTGCCCGCAGGCGCGCGGCACCGTCTGGGTGGCGCCGGATG GCGATGGCCAGCCCGCCCTGCATGTGGCGGGGGAAGCTCCCCATCTCGCCCGGCGGGTGCAGGACTACCTCAAGCGGGAA GCACGACAGGCGCTGACCACAGCGGTCAGGCATTATGCAGGCGCGCTGAAGGTGGAGGTGGGCCGCATCACCCTGCGCGA TACCGCGAGCCGCTGGGGCTCATGCTCGGCACAGGGCGACCTGTCGTTCTCGTGGCGGCTCGTGATGGCGCCGCGCTTCG TTCTCGACTACCTCGCGGCCCACGAAGTCGCCCACCGGCTGGAGATGAACCACGGCCCGCGCTTCTGGCGGCTGGTGGAG CAGGTGTGCCCGAACCGCCGGGAGGCCGAAGCCTGGCTGCGCCGCCACGGCTCCGACCTCCATCGCTACGGTGGGGACTA G
Upstream 100 bases:
>100_bases GAGGCGGTTGAGGACGGCCCGGACATGTTTGCCCTCAACAAGAATGTGACCGCCTTTTATCCCCGGCTTGCTCCGACTTA GCACTGGCAGGGAGAGCCAT
Downstream 100 bases:
>100_bases GGCGTTTTCGAGCGAAGCGGACACCGGTTCGCGGGAGGAAAACGCTTCAGCGCAAGGCTTTTAGAGCAGCTTCCGTAAGC CGGGGCGCGCGGAAATCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MRGRCGGNVAPVAAMLFRRQDPKPPAQRAAEWIELLLDDGPLRVAVRRNPQARRLTLRVRAAARDVTLTAPPHVPLAFAR DFVQRHREWVRVRLVRLPEKVLFEPGALIPLHGTPHRIVHCPQARGTVWVAPDGDGQPALHVAGEAPHLARRVQDYLKRE ARQALTTAVRHYAGALKVEVGRITLRDTASRWGSCSAQGDLSFSWRLVMAPRFVLDYLAAHEVAHRLEMNHGPRFWRLVE QVCPNRREAEAWLRRHGSDLHRYGGD
Sequences:
>Translated_266_residues MRGRCGGNVAPVAAMLFRRQDPKPPAQRAAEWIELLLDDGPLRVAVRRNPQARRLTLRVRAAARDVTLTAPPHVPLAFAR DFVQRHREWVRVRLVRLPEKVLFEPGALIPLHGTPHRIVHCPQARGTVWVAPDGDGQPALHVAGEAPHLARRVQDYLKRE ARQALTTAVRHYAGALKVEVGRITLRDTASRWGSCSAQGDLSFSWRLVMAPRFVLDYLAAHEVAHRLEMNHGPRFWRLVE QVCPNRREAEAWLRRHGSDLHRYGGD >Mature_266_residues MRGRCGGNVAPVAAMLFRRQDPKPPAQRAAEWIELLLDDGPLRVAVRRNPQARRLTLRVRAAARDVTLTAPPHVPLAFAR DFVQRHREWVRVRLVRLPEKVLFEPGALIPLHGTPHRIVHCPQARGTVWVAPDGDGQPALHVAGEAPHLARRVQDYLKRE ARQALTTAVRHYAGALKVEVGRITLRDTASRWGSCSAQGDLSFSWRLVMAPRFVLDYLAAHEVAHRLEMNHGPRFWRLVE QVCPNRREAEAWLRRHGSDLHRYGGD
Specific function: Unknown
COG id: COG1451
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30159; Mature: 30159
Theoretical pI: Translated: 11.63; Mature: 11.63
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGRCGGNVAPVAAMLFRRQDPKPPAQRAAEWIELLLDDGPLRVAVRRNPQARRLTLRVR CCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHEEEEEEE AAARDVTLTAPPHVPLAFARDFVQRHREWVRVRLVRLPEKVLFEPGALIPLHGTPHRIVH ECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEECCCCCCCEEE CPQARGTVWVAPDGDGQPALHVAGEAPHLARRVQDYLKREARQALTTAVRHYAGALKVEV CCCCCCEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE GRITLRDTASRWGSCSAQGDLSFSWRLVMAPRFVLDYLAAHEVAHRLEMNHGPRFWRLVE EEEEEHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH QVCPNRREAEAWLRRHGSDLHRYGGD HHCCCCHHHHHHHHHCCCHHHHCCCC >Mature Secondary Structure MRGRCGGNVAPVAAMLFRRQDPKPPAQRAAEWIELLLDDGPLRVAVRRNPQARRLTLRVR CCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHEEEEEEE AAARDVTLTAPPHVPLAFARDFVQRHREWVRVRLVRLPEKVLFEPGALIPLHGTPHRIVH ECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEECCCCCCCEEE CPQARGTVWVAPDGDGQPALHVAGEAPHLARRVQDYLKREARQALTTAVRHYAGALKVEV CCCCCCEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE GRITLRDTASRWGSCSAQGDLSFSWRLVMAPRFVLDYLAAHEVAHRLEMNHGPRFWRLVE EEEEEHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH QVCPNRREAEAWLRRHGSDLHRYGGD HHCCCCHHHHHHHHHCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA