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The map label for this gene is arpB [H]

Identifier: 153950201

GI number: 153950201

Start: 782224

End: 783714

Strand: Reverse

Name: arpB [H]

Synonym: YpsIP31758_0671

Alternate gene names: 153950201

Gene position: 783714-782224 (Counterclockwise)

Preceding gene: 153949590

Following gene: 153947562

Centisome position: 16.59

GC content: 32.8

Gene sequence:

>1491_bases
ATGGATATTTTCTCAAGTTTTAATCTATACAATAAAGAAATCTATAGTAACAGCCCCACACACCCTGCCTTTGATAAAAG
CAAACCGTATATATCAGAATTAAAAAGCCGTGAAGAGAAAAATCTAAACGGTGAAGTCAATTTTAAAGACGATATTGACA
AACTGATTATGTGCCGTCATCTATCAAGTCAATATATATTGGATTCATTATCCGATGAGGATACCGGAAAGGTTGATTTA
GATAAATTCTCATCCAAAGAGATCATCGCAAACCGAATAACCAGCAACGTTGAAGAGGTTTACGAGCAACTTCAGTTACA
AGCAAAAGAAATTTATTTTATTCCTAACAATGAATTCGGCATTTGTCTCAGTAAGATTTTTAAAAATATGGAGAGAAAGT
CAGAAAATACTCAATCCATTCTACTTGAGTCATTCAACCACGCGATGGCAGTAAGATTGAGAATCAAGGAAAATGAAAAC
AACAACACGAAAAGGTATGTCATTAGCGTTTATGACCCCAATATGACTAATGTTACTGTCCGCTGTGAGGTGGATGATTT
AGTTAAAGTTAGAGATTTTCAGGTGAAGGATTTTATTAACCATCATTTATTTGGCAATTTTTACAATAGCTACTACCCAA
CTGAATCAAGTGAAATATCAACCCTTTATATTTGTAAAAAACCAGCTAACGAAAGTGTTCCTGAGAGTACAGAGAAAAAA
ATTACATTTTATGATTGGGTAGCATTACCTGCCTCGTCTATTAATTTATACATTTTCCTTATTGAGGGGTTCTCACAAGA
AATTAAAAACTTAAAAAATCAATTAGAAATAATACATAAGAAAAACCCTGAGAAATTGATGGAAATACTTACCGCTAAAA
GTCCCGATGGGACAATGGGCTTTGAACAAGCATTACTTAATGATCACGCTGATGCCATAAACGCATTTGGCGAGTTGCTA
CAATTAGTTCCCGAAAACAGACGCAGTGAATTATTTATAAATGACAAAAAAACAAAGTACACATTATTTGATATAGTTTG
CTCTAGAGAAAGTAATGAAACAATAACGGCATTCAAAAACATAGTTTCACTTATCTCTAAAAGTGAGCGTTATAAATTAA
TGGAGTCAAAAGTAAACATACTTGATGCTATTATTAATTTATTTATTACCCAAAAAAACAGTAGTAATCTTAACGGAATT
TTTGAATTGATTTCATTAGCACCAGAAGAGCACATCATCAACTTACTGTCCAATATTGACATAACGCAATCTCTTGAATA
TTCGTTATATCATAATGATGCTAAATCAATAAATATCATCACTAAAATGCTCAATAAATTATCTGAACAAGGTCGGGAAA
ATATACCTTTCCTGAGAAAATTAGATGAGTCTATCGTGAATATGTATATCCAACTCGGTAAAAAAGAAGCCGTTTCTGCC
TACCGTGAATTATTGGCACTGAAACCGGGAACGCTTAAAGAGAGTAAATAG

Upstream 100 bases:

>100_bases
TCGATCATTAATATACAGATTTCACCTTATTTTATATTTAGATAACTTACTAGAAGATATCAACTCTATATTTTACGATA
CCGTAAAAAAAGGATGAAAT

Downstream 100 bases:

>100_bases
CCACATACTCGTTACACATCAAATTACCTATGCGTTGGCGGTCTTCCTGTAACTTGGATTATGTAGAAGATATAAAAAAC
CTTGCGACAGAATAATTATC

Product: enterotoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 496; Mature: 496

Protein sequence:

>496_residues
MDIFSSFNLYNKEIYSNSPTHPAFDKSKPYISELKSREEKNLNGEVNFKDDIDKLIMCRHLSSQYILDSLSDEDTGKVDL
DKFSSKEIIANRITSNVEEVYEQLQLQAKEIYFIPNNEFGICLSKIFKNMERKSENTQSILLESFNHAMAVRLRIKENEN
NNTKRYVISVYDPNMTNVTVRCEVDDLVKVRDFQVKDFINHHLFGNFYNSYYPTESSEISTLYICKKPANESVPESTEKK
ITFYDWVALPASSINLYIFLIEGFSQEIKNLKNQLEIIHKKNPEKLMEILTAKSPDGTMGFEQALLNDHADAINAFGELL
QLVPENRRSELFINDKKTKYTLFDIVCSRESNETITAFKNIVSLISKSERYKLMESKVNILDAIINLFITQKNSSNLNGI
FELISLAPEEHIINLLSNIDITQSLEYSLYHNDAKSINIITKMLNKLSEQGRENIPFLRKLDESIVNMYIQLGKKEAVSA
YRELLALKPGTLKESK

Sequences:

>Translated_496_residues
MDIFSSFNLYNKEIYSNSPTHPAFDKSKPYISELKSREEKNLNGEVNFKDDIDKLIMCRHLSSQYILDSLSDEDTGKVDL
DKFSSKEIIANRITSNVEEVYEQLQLQAKEIYFIPNNEFGICLSKIFKNMERKSENTQSILLESFNHAMAVRLRIKENEN
NNTKRYVISVYDPNMTNVTVRCEVDDLVKVRDFQVKDFINHHLFGNFYNSYYPTESSEISTLYICKKPANESVPESTEKK
ITFYDWVALPASSINLYIFLIEGFSQEIKNLKNQLEIIHKKNPEKLMEILTAKSPDGTMGFEQALLNDHADAINAFGELL
QLVPENRRSELFINDKKTKYTLFDIVCSRESNETITAFKNIVSLISKSERYKLMESKVNILDAIINLFITQKNSSNLNGI
FELISLAPEEHIINLLSNIDITQSLEYSLYHNDAKSINIITKMLNKLSEQGRENIPFLRKLDESIVNMYIQLGKKEAVSA
YRELLALKPGTLKESK
>Mature_496_residues
MDIFSSFNLYNKEIYSNSPTHPAFDKSKPYISELKSREEKNLNGEVNFKDDIDKLIMCRHLSSQYILDSLSDEDTGKVDL
DKFSSKEIIANRITSNVEEVYEQLQLQAKEIYFIPNNEFGICLSKIFKNMERKSENTQSILLESFNHAMAVRLRIKENEN
NNTKRYVISVYDPNMTNVTVRCEVDDLVKVRDFQVKDFINHHLFGNFYNSYYPTESSEISTLYICKKPANESVPESTEKK
ITFYDWVALPASSINLYIFLIEGFSQEIKNLKNQLEIIHKKNPEKLMEILTAKSPDGTMGFEQALLNDHADAINAFGELL
QLVPENRRSELFINDKKTKYTLFDIVCSRESNETITAFKNIVSLISKSERYKLMESKVNILDAIINLFITQKNSSNLNGI
FELISLAPEEHIINLLSNIDITQSLEYSLYHNDAKSINIITKMLNKLSEQGRENIPFLRKLDESIVNMYIQLGKKEAVSA
YRELLALKPGTLKESK

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 ANK repeats [H]

Homologues:

Organism=Escherichia coli, GI1790447, Length=160, Percent_Identity=31.25, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683
- InterPro:   IPR012927 [H]

Pfam domain/function: PF07906 Toxin_15 [H]

EC number: NA

Molecular weight: Translated: 57251; Mature: 57251

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIFSSFNLYNKEIYSNSPTHPAFDKSKPYISELKSREEKNLNGEVNFKDDIDKLIMCRH
CCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
LSSQYILDSLSDEDTGKVDLDKFSSKEIIANRITSNVEEVYEQLQLQAKEIYFIPNNEFG
CCHHHHHHCCCCCCCCCEEHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHH
ICLSKIFKNMERKSENTQSILLESFNHAMAVRLRIKENENNNTKRYVISVYDPNMTNVTV
HHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEEEECCCCCCCEEEEEEEECCCCCEEEE
RCEVDDLVKVRDFQVKDFINHHLFGNFYNSYYPTESSEISTLYICKKPANESVPESTEKK
EECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCC
ITFYDWVALPASSINLYIFLIEGFSQEIKNLKNQLEIIHKKNPEKLMEILTAKSPDGTMG
EEEEEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCH
FEQALLNDHADAINAFGELLQLVPENRRSELFINDKKTKYTLFDIVCSRESNETITAFKN
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEEEECCCCCCHHHHHHH
IVSLISKSERYKLMESKVNILDAIINLFITQKNSSNLNGIFELISLAPEEHIINLLSNID
HHHHHHCHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCHHHHHHHHHCCC
ITQSLEYSLYHNDAKSINIITKMLNKLSEQGRENIPFLRKLDESIVNMYIQLGKKEAVSA
HHHCCCHHEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
YRELLALKPGTLKESK
HHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDIFSSFNLYNKEIYSNSPTHPAFDKSKPYISELKSREEKNLNGEVNFKDDIDKLIMCRH
CCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
LSSQYILDSLSDEDTGKVDLDKFSSKEIIANRITSNVEEVYEQLQLQAKEIYFIPNNEFG
CCHHHHHHCCCCCCCCCEEHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHH
ICLSKIFKNMERKSENTQSILLESFNHAMAVRLRIKENENNNTKRYVISVYDPNMTNVTV
HHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEEEECCCCCCCEEEEEEEECCCCCEEEE
RCEVDDLVKVRDFQVKDFINHHLFGNFYNSYYPTESSEISTLYICKKPANESVPESTEKK
EECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCC
ITFYDWVALPASSINLYIFLIEGFSQEIKNLKNQLEIIHKKNPEKLMEILTAKSPDGTMG
EEEEEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCH
FEQALLNDHADAINAFGELLQLVPENRRSELFINDKKTKYTLFDIVCSRESNETITAFKN
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEEEECCCCCCHHHHHHH
IVSLISKSERYKLMESKVNILDAIINLFITQKNSSNLNGIFELISLAPEEHIINLLSNID
HHHHHHCHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCHHHHHHHHHCCC
ITQSLEYSLYHNDAKSINIITKMLNKLSEQGRENIPFLRKLDESIVNMYIQLGKKEAVSA
HHHCCCHHEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
YRELLALKPGTLKESK
HHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]