| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153947562
Identifier: 153947562
GI number: 153947562
Start: 781073
End: 781525
Strand: Reverse
Name: 153947562
Synonym: YpsIP31758_0669
Alternate gene names: NA
Gene position: 781525-781073 (Counterclockwise)
Preceding gene: 153950201
Following gene: 153950724
Centisome position: 16.55
GC content: 37.09
Gene sequence:
>453_bases ATGACCGTAATCCATGACGCAAAAGGCCCGGCAGACGAACTATCAATTGTTAATATCGAAAAAAAATTAGGAATTACCTT CCCTAATGATTATCGAGAATTTCTTAAGAAATATAATGGTGGATACCCAGAACCTGATGGTTTTTATTTTATTGATAGTA AAGATGGCTCCTGTGTCGATAAATTCTTGAGTACTAATGGTGATAAATCCGACAGCATAGCCGCGTGTTATGACCTGTAT AAAAAGAGGATCCCTCAAGGGTTTGTGCCAATCGCAACGGATCCAGGGGGAAACTTATTGTTACTTTGCGGTACTAAAGA AAATAGCGGTATCTTCTTTTGGGATCATGAGGAAGAAGTAGCAGATGGTGAACAACCCGACATGAGAAACATGCATTACA TATCTCCAACCTTTAATGATTTTATTGATAGTTTATATGAGATTGTAATTTAA
Upstream 100 bases:
>100_bases TGGCACCACCATCAAGACTCTGGTTATATGCAATTAGTACCAACAGATATACATGCTGCTGTAAAACATACCGGTGGGAT AGCAACAGGAAAATAAAATT
Downstream 100 bases:
>100_bases TTGATTTGGCCATTCAGTCACCGCCCCCAAAGAGTAACCCATACCCACCGGTCTTAACCGGCGGGTATAGGCTTTATGAA AAAACAGCATTAAATCCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MTVIHDAKGPADELSIVNIEKKLGITFPNDYREFLKKYNGGYPEPDGFYFIDSKDGSCVDKFLSTNGDKSDSIAACYDLY KKRIPQGFVPIATDPGGNLLLLCGTKENSGIFFWDHEEEVADGEQPDMRNMHYISPTFNDFIDSLYEIVI
Sequences:
>Translated_150_residues MTVIHDAKGPADELSIVNIEKKLGITFPNDYREFLKKYNGGYPEPDGFYFIDSKDGSCVDKFLSTNGDKSDSIAACYDLY KKRIPQGFVPIATDPGGNLLLLCGTKENSGIFFWDHEEEVADGEQPDMRNMHYISPTFNDFIDSLYEIVI >Mature_149_residues TVIHDAKGPADELSIVNIEKKLGITFPNDYREFLKKYNGGYPEPDGFYFIDSKDGSCVDKFLSTNGDKSDSIAACYDLYK KRIPQGFVPIATDPGGNLLLLCGTKENSGIFFWDHEEEVADGEQPDMRNMHYISPTFNDFIDSLYEIVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16906; Mature: 16775
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVIHDAKGPADELSIVNIEKKLGITFPNDYREFLKKYNGGYPEPDGFYFIDSKDGSCVD CCEEECCCCCCCCEEEEEEHHHCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHH KFLSTNGDKSDSIAACYDLYKKRIPQGFVPIATDPGGNLLLLCGTKENSGIFFWDHEEEV HHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCCEEEECCCHHH ADGEQPDMRNMHYISPTFNDFIDSLYEIVI CCCCCCCCCCEEEECCCHHHHHHHHHHHCC >Mature Secondary Structure TVIHDAKGPADELSIVNIEKKLGITFPNDYREFLKKYNGGYPEPDGFYFIDSKDGSCVD CEEECCCCCCCCEEEEEEHHHCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHH KFLSTNGDKSDSIAACYDLYKKRIPQGFVPIATDPGGNLLLLCGTKENSGIFFWDHEEEV HHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCCEEEECCCHHH ADGEQPDMRNMHYISPTFNDFIDSLYEIVI CCCCCCCCCCEEEECCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA