| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153949590
Identifier: 153949590
GI number: 153949590
Start: 798675
End: 798818
Strand: Reverse
Name: 153949590
Synonym: YpsIP31758_0674
Alternate gene names: NA
Gene position: 798818-798675 (Counterclockwise)
Preceding gene: 153948043
Following gene: 153950201
Centisome position: 16.91
GC content: 47.22
Gene sequence:
>144_bases ATGACGGGCGATGAAGATGCCAACCGTATTGTCGGCAAACGAATCATAGATGAGCTCATGGGGGAGATCGATATGGCCCT GACTCATGAGGTTCTCTCTGCCAAAGGAGCCATCTCCTTATTAGATAGTCAGTGGAATATCTAA
Upstream 100 bases:
>100_bases CTTTCTGCCGGAGCACTGCAGGAACTACAGCATATCCAAACTGACCCGCATTATCAGGGTCCACAGATTTACTACCCCGC ATCAAAACAGGGATAGTAAG
Downstream 100 bases:
>100_bases TCTCGCCTTAATACTGTACGGCCCGTTACCCCATAAAAAACGGCGCATATTCTGTCCTGCAATATGCGCCGTTGATCACC ATCATGTCGTTAGTCGTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: Antigenic Leucine-Rich Repeat Protein
Number of amino acids: Translated: 47; Mature: 46
Protein sequence:
>47_residues MTGDEDANRIVGKRIIDELMGEIDMALTHEVLSAKGAISLLDSQWNI
Sequences:
>Translated_47_residues MTGDEDANRIVGKRIIDELMGEIDMALTHEVLSAKGAISLLDSQWNI >Mature_46_residues TGDEDANRIVGKRIIDELMGEIDMALTHEVLSAKGAISLLDSQWNI
Specific function: Unknown
COG id: COG4886
COG function: function code S; Leucine-rich repeat (LRR) protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5171; Mature: 5040
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.4 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGDEDANRIVGKRIIDELMGEIDMALTHEVLSAKGAISLLDSQWNI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCC >Mature Secondary Structure TGDEDANRIVGKRIIDELMGEIDMALTHEVLSAKGAISLLDSQWNI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA