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The map label for this gene is 153949830

Identifier: 153949830

GI number: 153949830

Start: 1933567

End: 1934319

Strand: Reverse

Name: 153949830

Synonym: YpsIP31758_1664

Alternate gene names: NA

Gene position: 1934319-1933567 (Counterclockwise)

Preceding gene: 153946900

Following gene: 153947879

Centisome position: 40.95

GC content: 44.89

Gene sequence:

>753_bases
ATGATAAAATATCACTTATTATCTAAATTGATATTATCCTTTATTTTGCTACCCATCGCCCCTCTACATGCTGCTGTTTC
CGTATTAATTTGGCCCATTGACCCAGTCATTAACGATGACGAAAATGCCACAGCATTATGGCTGGAAAATAAAGATAGCC
AACCAACTTATATGCAAATACGGGTACTGAGTTGGCGACAGGTTAATGGTCTGGACGACTACAACGCTCAGACTGCCATT
ATTGCCAGCCCCCCCGTTGCCAATATTCAACCAGGCAAGCGCCAACTGATTCGCTTAGTTAAGAATGCACAAGTTCCTGC
GGGAAAAGAGCTGGCCTACCGGATATTAATCGATGAGATCCCCCGTCAGGAACCTAATGATAAAAATAACCCGTCATCAA
CACAATTGGGTCTGACATTTCAAATGCGCTATTCCGTGCCCCTATTTGTTTATGGGAATGGTACGCAGATAGCACCCGAG
GCGACACAACCGACTGATATTGCACAACCTACGCTCAGCTATATATTGAATCGGCAACAGGGGAAGCAATGGCTGACGAT
CCGCAATCAAAGTGAAATTCATGCACGTATTTCTCAGGTCACACTCAACGGCCAGACGGTTAACAACGGCTTATTGGGCT
ATGTATTAGCGAGATCACAGATGAGCTTTCCCATCAGCTTAGCCGCCAGAAAAGGTGAGTTGGCGGCCATTATCAATAGC
AACACCAAACCAGTAACTATTCCATACCAGTAA

Upstream 100 bases:

>100_bases
GTTTGCCAGTAATACACAACCTACTGCGGGAGTTTATCTAGATACGTTATTGGTTACTGTCACTTACTGATCAATAACAC
ATACCGGAGAAAAACTTACG

Downstream 100 bases:

>100_bases
CTAGCCCATATCAGTAATTGAGAGACATAAAAACAAATGAGATTTTACACAATGAACTGAGGATCGAGGATGATTATCAG
ATTCCGGCTACCGCCATTAT

Product: pilus assembly chaperone

Products: NA

Alternate protein names: Type 1 Pili Usher Pathway Chaperone CsuC; Fimbrial Chaperone; P Pilus Assembly Protein Chaperone PapD-Like Protein; CsuC Protein; P Pilus Assembly Protein Chaperone PapD-Like; Chaperone Protein; Fimbrial Chaperone Protein; Exported Fimbriae-Related Chaperone; Pilus Assembly Protein; Pili Assembly Chaperone Transmembrane Protein; Chaperone Protein EcpD; CsuC Protein Fimbrial Chaperone Proteins; Putataive Fimbrial Chaperone Protein; Type I Pili; Fimbrial Assembly Chaperone; Pili Assembly Chaperone Transmembrane Protein Papd-Like; PilP Assembly Chaperone Transmembrane Protein; Fimbriae-Assembly Chaperone; Pilus Assembly Protein Chaperone PapD; Type 1 Pilus Chaperone FimC; Fimbriae Chaperone; Chaperone Protein MrkB; Type 1 Pili Usher Pathway Chaperone; Type I Pilus Usher Pathway Chaperone CsuC; P Pilus Assembly Protein Chaperone PapD; Pilus Assembly Chaperone; Pili Assembly Chaperone Protein

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MIKYHLLSKLILSFILLPIAPLHAAVSVLIWPIDPVINDDENATALWLENKDSQPTYMQIRVLSWRQVNGLDDYNAQTAI
IASPPVANIQPGKRQLIRLVKNAQVPAGKELAYRILIDEIPRQEPNDKNNPSSTQLGLTFQMRYSVPLFVYGNGTQIAPE
ATQPTDIAQPTLSYILNRQQGKQWLTIRNQSEIHARISQVTLNGQTVNNGLLGYVLARSQMSFPISLAARKGELAAIINS
NTKPVTIPYQ

Sequences:

>Translated_250_residues
MIKYHLLSKLILSFILLPIAPLHAAVSVLIWPIDPVINDDENATALWLENKDSQPTYMQIRVLSWRQVNGLDDYNAQTAI
IASPPVANIQPGKRQLIRLVKNAQVPAGKELAYRILIDEIPRQEPNDKNNPSSTQLGLTFQMRYSVPLFVYGNGTQIAPE
ATQPTDIAQPTLSYILNRQQGKQWLTIRNQSEIHARISQVTLNGQTVNNGLLGYVLARSQMSFPISLAARKGELAAIINS
NTKPVTIPYQ
>Mature_250_residues
MIKYHLLSKLILSFILLPIAPLHAAVSVLIWPIDPVINDDENATALWLENKDSQPTYMQIRVLSWRQVNGLDDYNAQTAI
IASPPVANIQPGKRQLIRLVKNAQVPAGKELAYRILIDEIPRQEPNDKNNPSSTQLGLTFQMRYSVPLFVYGNGTQIAPE
ATQPTDIAQPTLSYILNRQQGKQWLTIRNQSEIHARISQVTLNGQTVNNGLLGYVLARSQMSFPISLAARKGELAAIINS
NTKPVTIPYQ

Specific function: Unknown

COG id: COG3121

COG function: function code NU; P pilus assembly protein, chaperone PapD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27886; Mature: 27886

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKYHLLSKLILSFILLPIAPLHAAVSVLIWPIDPVINDDENATALWLENKDSQPTYMQI
CCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEE
RVLSWRQVNGLDDYNAQTAIIASPPVANIQPGKRQLIRLVKNAQVPAGKELAYRILIDEI
EEEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHEEEEHHHC
PRQEPNDKNNPSSTQLGLTFQMRYSVPLFVYGNGTQIAPEATQPTDIAQPTLSYILNRQQ
CCCCCCCCCCCCCEEEEEEEEEEECCEEEEEECCCEECCCCCCCCCHHHHHHHHHHHHCC
GKQWLTIRNQSEIHARISQVTLNGQTVNNGLLGYVLARSQMSFPISLAARKGELAAIINS
CCEEEEEECCHHHEEEEEEEEECCEEECCCCEEEEEECCCCCCCEEEEECCCCEEEEEEC
NTKPVTIPYQ
CCCEEEECCC
>Mature Secondary Structure
MIKYHLLSKLILSFILLPIAPLHAAVSVLIWPIDPVINDDENATALWLENKDSQPTYMQI
CCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEE
RVLSWRQVNGLDDYNAQTAIIASPPVANIQPGKRQLIRLVKNAQVPAGKELAYRILIDEI
EEEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHEEEEHHHC
PRQEPNDKNNPSSTQLGLTFQMRYSVPLFVYGNGTQIAPEATQPTDIAQPTLSYILNRQQ
CCCCCCCCCCCCCEEEEEEEEEEECCEEEEEECCCEECCCCCCCCCHHHHHHHHHHHHCC
GKQWLTIRNQSEIHARISQVTLNGQTVNNGLLGYVLARSQMSFPISLAARKGELAAIINS
CCEEEEEECCHHHEEEEEEEEECCEEECCCCEEEEEECCCCCCCEEEEECCCCEEEEEEC
NTKPVTIPYQ
CCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA