Click here to switch to the map view.

The map label for this gene is 153946900

Identifier: 153946900

GI number: 153946900

Start: 1934350

End: 1934934

Strand: Reverse

Name: 153946900

Synonym: YpsIP31758_1665

Alternate gene names: NA

Gene position: 1934934-1934350 (Counterclockwise)

Preceding gene: 153946934

Following gene: 153949830

Centisome position: 40.97

GC content: 46.67

Gene sequence:

>585_bases
TTGGTAAGTATAGAGGGAGGGCTAACAATGATAAGTCTTTTTTCTCCATGTCACCTCAGTGCCGCTTTACTTATCTCAGC
ACTGTCTATCGTACCTACCAACGCGGCACCCTCACCCGTATCTAGCCCTTTTACTGTCAACGCTACCGTGCTAACTGGAT
GTGTTCTGGGGGGAGGCGCAACTGACAGCTCCAATTTTGGTTCCATAAATTTTGGCAATATTACTTCGCTGGCAACCGCC
ATTAATGCAACTTCTGGGCTGAATGCAGGAACCATTACCATTCAGTGTAATGGTAATCCTAGCGTAACACTCGCGCTCAA
TTCAGGGGCCAACATGACGGGTAACATCTCCGCGGGTAGGCACCTGCTTAACAGCAGTACCGGTGAATACTTGCTGTATC
AAATTTATCAAAATAGCCCCCGAACCCTTATTTGGGGAGATGGTTCAAATGGGGGGGCAACACAAGTCATTGCTACCGAC
GGCACGCTACAGCAAGTTATTTTATATGCACAACTGTTTGCCAGTAATACACAACCTACTGCGGGAGTTTATCTAGATAC
GTTATTGGTTACTGTCACTTACTGA

Upstream 100 bases:

>100_bases
CTACCGGACAAGTCGTCACCATACCGGTTTATGGCCTGGTTCCTGCACAATCGACGCCTGCGGTAGGGACCTATACTGAT
ACCGTTCAGGTCACGGTGAG

Downstream 100 bases:

>100_bases
TCAATAACACATACCGGAGAAAAACTTACGATGATAAAATATCACTTATTATCTAAATTGATATTATCCTTTATTTTGCT
ACCCATCGCCCCTCTACATG

Product: hypothetical protein

Products: NA

Alternate protein names: Spore Coat U Domain Protein; Type 1 Pili Subunit CsuA/B Protein

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MVSIEGGLTMISLFSPCHLSAALLISALSIVPTNAAPSPVSSPFTVNATVLTGCVLGGGATDSSNFGSINFGNITSLATA
INATSGLNAGTITIQCNGNPSVTLALNSGANMTGNISAGRHLLNSSTGEYLLYQIYQNSPRTLIWGDGSNGGATQVIATD
GTLQQVILYAQLFASNTQPTAGVYLDTLLVTVTY

Sequences:

>Translated_194_residues
MVSIEGGLTMISLFSPCHLSAALLISALSIVPTNAAPSPVSSPFTVNATVLTGCVLGGGATDSSNFGSINFGNITSLATA
INATSGLNAGTITIQCNGNPSVTLALNSGANMTGNISAGRHLLNSSTGEYLLYQIYQNSPRTLIWGDGSNGGATQVIATD
GTLQQVILYAQLFASNTQPTAGVYLDTLLVTVTY
>Mature_194_residues
MVSIEGGLTMISLFSPCHLSAALLISALSIVPTNAAPSPVSSPFTVNATVLTGCVLGGGATDSSNFGSINFGNITSLATA
INATSGLNAGTITIQCNGNPSVTLALNSGANMTGNISAGRHLLNSSTGEYLLYQIYQNSPRTLIWGDGSNGGATQVIATD
GTLQQVILYAQLFASNTQPTAGVYLDTLLVTVTY

Specific function: Unknown

COG id: COG5430

COG function: function code S; Uncharacterized secreted protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19721; Mature: 19721

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: PS00221 MIP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSIEGGLTMISLFSPCHLSAALLISALSIVPTNAAPSPVSSPFTVNATVLTGCVLGGGA
CEEECCCEEEEEECCCHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEHHEEEEEEECCCC
TDSSNFGSINFGNITSLATAINATSGLNAGTITIQCNGNPSVTLALNSGANMTGNISAGR
CCCCCCCCEECCCHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEECCCCCEEECHHHHH
HLLNSSTGEYLLYQIYQNSPRTLIWGDGSNGGATQVIATDGTLQQVILYAQLFASNTQPT
HHHCCCCCCEEEEEEECCCCCEEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCC
AGVYLDTLLVTVTY
CHHEEEEEEEEEEC
>Mature Secondary Structure
MVSIEGGLTMISLFSPCHLSAALLISALSIVPTNAAPSPVSSPFTVNATVLTGCVLGGGA
CEEECCCEEEEEECCCHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEHHEEEEEEECCCC
TDSSNFGSINFGNITSLATAINATSGLNAGTITIQCNGNPSVTLALNSGANMTGNISAGR
CCCCCCCCEECCCHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEECCCCCEEECHHHHH
HLLNSSTGEYLLYQIYQNSPRTLIWGDGSNGGATQVIATDGTLQQVILYAQLFASNTQPT
HHHCCCCCCEEEEEEECCCCCEEEEECCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCC
AGVYLDTLLVTVTY
CHHEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA