| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153947794
Identifier: 153947794
GI number: 153947794
Start: 1150538
End: 1150999
Strand: Direct
Name: 153947794
Synonym: YpsIP31758_0961
Alternate gene names: NA
Gene position: 1150538-1150999 (Clockwise)
Preceding gene: 153947327
Following gene: 153947137
Centisome position: 24.36
GC content: 28.35
Gene sequence:
>462_bases ATGAGTTACGTCATGTTTTTACAGCATTTATTTTCTGCAAAGAGAAGAGTGCTACTACTTTATCTGCTTGTTATCTCTAT TCCTATCGTGTATTACATTACCAGTAGAGTAATTGAAGTAAGAAATAACAAACTGTTAATAAAATATAGTGAGCTAAGTT ATCATCTTCAGCAACACTCTATCATGGCGAAAAAATCAAACATAAAAAGCCATAAAAAGAGTGATCCTATCGATATTGAA ATAAATAAATCATTTGAAAATAAAAATATAATATTCACTGTCTCCTTACTTGATGGTGGTAAATGTTTTGTGGAAATAAA CTCAGCTAAATTTTCAAATTTACTTGATGCTATTATTGATGTGTCAAATAAATATGATGTTAATGTATCTAGTGCAGATA TATATGTTCACCAAGATTATGATGATGGGTATGTTGCAGGACAAATTATATTCTTTAAATGA
Upstream 100 bases:
>100_bases TAAATGAAATGCTAAATGATAAAACTAATCTATTTAATGCCAGGGTTGAGGTGATTCGTTCTGGAGAAGACAAATATAAT ATCAAACTAAGCAGCCAACC
Downstream 100 bases:
>100_bases ACCCCACGGTCTGATAGAGGTAAATATGATGGATATGCAGTTTTTTTTTGTGGGCTATTTAATTTTAGGGGCCATGGTAG GCAGCTTTCTTAATGTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MSYVMFLQHLFSAKRRVLLLYLLVISIPIVYYITSRVIEVRNNKLLIKYSELSYHLQQHSIMAKKSNIKSHKKSDPIDIE INKSFENKNIIFTVSLLDGGKCFVEINSAKFSNLLDAIIDVSNKYDVNVSSADIYVHQDYDDGYVAGQIIFFK
Sequences:
>Translated_153_residues MSYVMFLQHLFSAKRRVLLLYLLVISIPIVYYITSRVIEVRNNKLLIKYSELSYHLQQHSIMAKKSNIKSHKKSDPIDIE INKSFENKNIIFTVSLLDGGKCFVEINSAKFSNLLDAIIDVSNKYDVNVSSADIYVHQDYDDGYVAGQIIFFK >Mature_152_residues SYVMFLQHLFSAKRRVLLLYLLVISIPIVYYITSRVIEVRNNKLLIKYSELSYHLQQHSIMAKKSNIKSHKKSDPIDIEI NKSFENKNIIFTVSLLDGGKCFVEINSAKFSNLLDAIIDVSNKYDVNVSSADIYVHQDYDDGYVAGQIIFFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17675; Mature: 17544
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYVMFLQHLFSAKRRVLLLYLLVISIPIVYYITSRVIEVRNNKLLIKYSELSYHLQQHS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEEHHHHHHHHHHH IMAKKSNIKSHKKSDPIDIEINKSFENKNIIFTVSLLDGGKCFVEINSAKFSNLLDAIID HHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEECCCEEEEEECCHHHHHHHHHHHC VSNKYDVNVSSADIYVHQDYDDGYVAGQIIFFK CCCCCEEEECCEEEEEEECCCCCEEEEEEEEEC >Mature Secondary Structure SYVMFLQHLFSAKRRVLLLYLLVISIPIVYYITSRVIEVRNNKLLIKYSELSYHLQQHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEEHHHHHHHHHHH IMAKKSNIKSHKKSDPIDIEINKSFENKNIIFTVSLLDGGKCFVEINSAKFSNLLDAIID HHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEECCCEEEEEECCHHHHHHHHHHHC VSNKYDVNVSSADIYVHQDYDDGYVAGQIIFFK CCCCCEEEECCEEEEEEECCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA