Click here to switch to the map view.

The map label for this gene is gspL [H]

Identifier: 153947327

GI number: 153947327

Start: 1149372

End: 1150541

Strand: Direct

Name: gspL [H]

Synonym: YpsIP31758_0960

Alternate gene names: 153947327

Gene position: 1149372-1150541 (Clockwise)

Preceding gene: 153948514

Following gene: 153947794

Centisome position: 24.33

GC content: 31.97

Gene sequence:

>1170_bases
GTGAAATTAACCTTCACACTCCTTATTCGACTAGGGGAAACAGAATTTGAACCTATCTATTGGTATGTTGAATCACAGGG
AAAGAAATTAGTCAGACATGGAAAAATTAATGGAGTCGCTGAGTTAAAAAATATAACTTTATATGCCAATAATGTTGTCA
AGATTTTGGTCCCCGCGAATAAAATCATTTTCAGAAGCTTAAGTATTAAGAAAAATGAAGTGATGAATAATATAAAATCG
ATAGCCTTCTCGATTGAACAGTCTATTTCTAGTGATATAGATAATTTTCATATTGTGATATTAGATCAAGATAAAGACTT
TTGCCATGTTGCTGCTATTGAACATGAATTGATGAATCGTTGGTTGTTCTGGTTAAAAATAAATGGGATATCAGCATGTT
GTATAATGCCTGACGCTTTTGCTCTACCATTTTTTAACAGTGAATGGAGTGTTATAAAAATTGAGAGTAACTGGTTGGTT
AGAAATAATGAAATGTCTGGTTTTTTAGTTAATTCGAGTGTCTTGGAAAACATACTTATGATAGCGGAACCCACCATTAA
AGTTAATACTTTTAGTCCGACAGATATTAAGTGGGGTAATTGGCAGTCGCTAGACTATAGTGATCCTGTATTAATTATGG
CAAAAACTGTGAGTGGTAATCATGTTAATCTATTGAGTGGGAAATATAAATATGCTGAAAGAATAATAGTTAACAATGGT
GTTTTTTTGCGTGTTGCCAGTTGGTTTTTTCTCTTGTTTTTAGTAATGAGTTTAAATGGTTGGTATCAAGGTTACAAAAT
AGTCAGGGATACAGGGGCCTTAAGTAAGGTAGCACAAGATTTTTATGCTGATTTTTTACCCCCCGCATATCATGGTGGGG
ATGTTAATACGAGCTTCAATAAATATATTTCAGATCTGGATCTTAAAAAAAACAATGTCAGTTTCATTAAATTATTAAAT
GCTGTAAGTTATTATACAGCTGATGAAAATGTAGATGTACGTAGTTTTAATTTCAATTATTCTGATGGTGAAATATCTTT
TGATATTGAAGGTGATGATGATTTAATAAATGAAATGCTAAATGATAAAACTAATCTATTTAATGCCAGGGTTGAGGTGA
TTCGTTCTGGAGAAGACAAATATAATATCAAACTAAGCAGCCAACCATGA

Upstream 100 bases:

>100_bases
GATAGTTATTATCAACTGATTACTTTTATCCATGCTGTAGGTAAGTCAATAGCTATTTTAAACCGGAGATACAGTTTTAG
TGAGCAACATCATTGATGAC

Downstream 100 bases:

>100_bases
GTTACGTCATGTTTTTACAGCATTTATTTTCTGCAAAGAGAAGAGTGCTACTACTTTATCTGCTTGTTATCTCTATTCCT
ATCGTGTATTACATTACCAG

Product: general secretion pathway protein L

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MKLTFTLLIRLGETEFEPIYWYVESQGKKLVRHGKINGVAELKNITLYANNVVKILVPANKIIFRSLSIKKNEVMNNIKS
IAFSIEQSISSDIDNFHIVILDQDKDFCHVAAIEHELMNRWLFWLKINGISACCIMPDAFALPFFNSEWSVIKIESNWLV
RNNEMSGFLVNSSVLENILMIAEPTIKVNTFSPTDIKWGNWQSLDYSDPVLIMAKTVSGNHVNLLSGKYKYAERIIVNNG
VFLRVASWFFLLFLVMSLNGWYQGYKIVRDTGALSKVAQDFYADFLPPAYHGGDVNTSFNKYISDLDLKKNNVSFIKLLN
AVSYYTADENVDVRSFNFNYSDGEISFDIEGDDDLINEMLNDKTNLFNARVEVIRSGEDKYNIKLSSQP

Sequences:

>Translated_389_residues
MKLTFTLLIRLGETEFEPIYWYVESQGKKLVRHGKINGVAELKNITLYANNVVKILVPANKIIFRSLSIKKNEVMNNIKS
IAFSIEQSISSDIDNFHIVILDQDKDFCHVAAIEHELMNRWLFWLKINGISACCIMPDAFALPFFNSEWSVIKIESNWLV
RNNEMSGFLVNSSVLENILMIAEPTIKVNTFSPTDIKWGNWQSLDYSDPVLIMAKTVSGNHVNLLSGKYKYAERIIVNNG
VFLRVASWFFLLFLVMSLNGWYQGYKIVRDTGALSKVAQDFYADFLPPAYHGGDVNTSFNKYISDLDLKKNNVSFIKLLN
AVSYYTADENVDVRSFNFNYSDGEISFDIEGDDDLINEMLNDKTNLFNARVEVIRSGEDKYNIKLSSQP
>Mature_389_residues
MKLTFTLLIRLGETEFEPIYWYVESQGKKLVRHGKINGVAELKNITLYANNVVKILVPANKIIFRSLSIKKNEVMNNIKS
IAFSIEQSISSDIDNFHIVILDQDKDFCHVAAIEHELMNRWLFWLKINGISACCIMPDAFALPFFNSEWSVIKIESNWLV
RNNEMSGFLVNSSVLENILMIAEPTIKVNTFSPTDIKWGNWQSLDYSDPVLIMAKTVSGNHVNLLSGKYKYAERIIVNNG
VFLRVASWFFLLFLVMSLNGWYQGYKIVRDTGALSKVAQDFYADFLPPAYHGGDVNTSFNKYISDLDLKKNNVSFIKLLN
AVSYYTADENVDVRSFNFNYSDGEISFDIEGDDDLINEMLNDKTNLFNARVEVIRSGEDKYNIKLSSQP

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG3297

COG function: function code U; Type II secretory pathway, component PulL

Gene ontology:

Cell location: Cell inner membrane (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP L family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007812 [H]

Pfam domain/function: PF05134 GspL [H]

EC number: NA

Molecular weight: Translated: 44499; Mature: 44499

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTFTLLIRLGETEFEPIYWYVESQGKKLVRHGKINGVAELKNITLYANNVVKILVPAN
CEEEEEEEEEECCCCCCEEEEEEECCCHHHHHCCCCCCEEEEEEEEEEECCEEEEEECCC
KIIFRSLSIKKNEVMNNIKSIAFSIEQSISSDIDNFHIVILDQDKDFCHVAAIEHELMNR
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEHHHHHHHHHHC
WLFWLKINGISACCIMPDAFALPFFNSEWSVIKIESNWLVRNNEMSGFLVNSSVLENILM
EEEEEEECCEEEEEECCCCEECCEECCCCCEEEEECCEEEECCCCCEEEECHHHHHHHHE
IAEPTIKVNTFSPTDIKWGNWQSLDYSDPVLIMAKTVSGNHVNLLSGKYKYAERIIVNNG
EECCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCHHHEEEEEECCC
VFLRVASWFFLLFLVMSLNGWYQGYKIVRDTGALSKVAQDFYADFLPPAYHGGDVNTSFN
EEEHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCHH
KYISDLDLKKNNVSFIKLLNAVSYYTADENVDVRSFNFNYSDGEISFDIEGDDDLINEML
HHHHHCCCCCCCHHHHHHHHHHHEEECCCCCEEEEEECCCCCCEEEEEECCCHHHHHHHH
NDKTNLFNARVEVIRSGEDKYNIKLSSQP
CCHHHHHHHEEEEEECCCCEEEEEECCCC
>Mature Secondary Structure
MKLTFTLLIRLGETEFEPIYWYVESQGKKLVRHGKINGVAELKNITLYANNVVKILVPAN
CEEEEEEEEEECCCCCCEEEEEEECCCHHHHHCCCCCCEEEEEEEEEEECCEEEEEECCC
KIIFRSLSIKKNEVMNNIKSIAFSIEQSISSDIDNFHIVILDQDKDFCHVAAIEHELMNR
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEHHHHHHHHHHC
WLFWLKINGISACCIMPDAFALPFFNSEWSVIKIESNWLVRNNEMSGFLVNSSVLENILM
EEEEEEECCEEEEEECCCCEECCEECCCCCEEEEECCEEEECCCCCEEEECHHHHHHHHE
IAEPTIKVNTFSPTDIKWGNWQSLDYSDPVLIMAKTVSGNHVNLLSGKYKYAERIIVNNG
EECCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCHHHEEEEEECCC
VFLRVASWFFLLFLVMSLNGWYQGYKIVRDTGALSKVAQDFYADFLPPAYHGGDVNTSFN
EEEHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCHH
KYISDLDLKKNNVSFIKLLNAVSYYTADENVDVRSFNFNYSDGEISFDIEGDDDLINEML
HHHHHCCCCCCCHHHHHHHHHHHEEECCCCCEEEEEECCCCCCEEEEEECCCHHHHHHHH
NDKTNLFNARVEVIRSGEDKYNIKLSSQP
CCHHHHHHHEEEEEECCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8407845 [H]