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The map label for this gene is pyrC [H]

Identifier: 153951235

GI number: 153951235

Start: 481213

End: 482391

Strand: Direct

Name: pyrC [H]

Synonym: JJD26997_0534

Alternate gene names: 153951235

Gene position: 481213-482391 (Clockwise)

Preceding gene: 153952074

Following gene: 153952258

Centisome position: 26.08

GC content: 28.67

Gene sequence:

>1179_bases
ATGATAATTAAAAATGCAAAAATTTATGGAGATTCTTTACAAGATATAGAGATTAAAGAAGGAAAAATTACCAATATTGG
TTCTAATTTGCAAGGTGAAGAAATTTTAGATGCTAAAGGTATGACTTTGCTTCCATCTTTTGTGGATTTGTGTGTGAGTT
TGAAAAATGATAAATTTTCTTTAGCTAATCTAGAACTTTTAGAAAATGAGTGTCTAAAAGGAGGGATTTCTAGTATAGTT
TTGCGTGATTGTATGGATTTTGATGAAGAAAGTTTTGCTTTATTTTTACAAAATTTAGCTCAAAGAAAGATGCAAATTTT
TTCAAGTATGCGGGTTAAGGATGCAAACGGCAAGCTTAAAAATTTAGCCACTCTTTTAAATAAAGGTGCTTGTGCTTTAG
AGCTTGATAGTTCTTTGGATGCAAATATTTTAAAAGTAAGTTCACAATATGCTTTTATGAAAGACTCTCCAATTTTTGTG
CGTTGTTATGATAAGGATTTTGATGATAATGGAGTGATGAATGATTGTGAAATGAGTTTTGAACTAGGGCTTATAGGCAT
GAGTAAAATCGCTGAAACTAGCCAGATAGCTAAAATGAAAGAATTGGCTAAATTTTATAAAAATAAAGTTGTTTTTGATC
TTTTAAGTTTGAAAGATTCTTTAGTTTTATTAGATGAAAAGGATTTAAAACTTGTAAGCATTCATCATCTTATCAAAGAT
GATAGTGCTTGTGAAGATTTTAATACCGCTGCGAAACTTATGCCACCTTTAAGAAGCAAAGAAGATGTTTTGGCTTTAAG
AGAGGCTTTGAAAGAAGGAAAAATTAGCTTTTTAACTTCCTTGCATAGTGCAAAATCAATTTCTTTAAAAGATTTAGCTT
TTAATGAAGCGGCTTTTGGAATTCATAGTGTATGTGAATTTATAAGTCTTTGTTATACTTTTTTAATCAAAGAGGGATCT
TTAAATTGGCAAGAGCTTTGTCAATTTACAAGTAAAAATTCTAGTGAATTTTTAGGTTTAAATAGTGGAGTTATAGAAGT
TGGAAAAGAAGCTAATCTAGTTCTTTTTGATGAGAATGAAGAAATTTTTACTCCAAAAAGTTCTCTTTATTCTGAAGATA
AGCTTTTTGGAAGGGTTAAAATGCATATAATTAAAGGAAAAAATATTTTAGAAAAATAA

Upstream 100 bases:

>100_bases
TTATACACCTATCGTAAATGAAGTAGTGGCAATTTTTAAGGGTAAAAGTGTGCAAGAAGCAACGCAAAATTTATTAAAGC
AAAATGATTAAGGAAAAACC

Downstream 100 bases:

>100_bases
GCTTTGCTTAAATTCCTAAAGATAGTTTAAATCCTAAAAATACAAGTGCTGCCATAACACCAGCAGCTGGTAAAGTGATA
ATCCAAGCTAATCCTATAGG

Product: dihydroorotase

Products: NA

Alternate protein names: DHOase [H]

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MIIKNAKIYGDSLQDIEIKEGKITNIGSNLQGEEILDAKGMTLLPSFVDLCVSLKNDKFSLANLELLENECLKGGISSIV
LRDCMDFDEESFALFLQNLAQRKMQIFSSMRVKDANGKLKNLATLLNKGACALELDSSLDANILKVSSQYAFMKDSPIFV
RCYDKDFDDNGVMNDCEMSFELGLIGMSKIAETSQIAKMKELAKFYKNKVVFDLLSLKDSLVLLDEKDLKLVSIHHLIKD
DSACEDFNTAAKLMPPLRSKEDVLALREALKEGKISFLTSLHSAKSISLKDLAFNEAAFGIHSVCEFISLCYTFLIKEGS
LNWQELCQFTSKNSSEFLGLNSGVIEVGKEANLVLFDENEEIFTPKSSLYSEDKLFGRVKMHIIKGKNILEK

Sequences:

>Translated_392_residues
MIIKNAKIYGDSLQDIEIKEGKITNIGSNLQGEEILDAKGMTLLPSFVDLCVSLKNDKFSLANLELLENECLKGGISSIV
LRDCMDFDEESFALFLQNLAQRKMQIFSSMRVKDANGKLKNLATLLNKGACALELDSSLDANILKVSSQYAFMKDSPIFV
RCYDKDFDDNGVMNDCEMSFELGLIGMSKIAETSQIAKMKELAKFYKNKVVFDLLSLKDSLVLLDEKDLKLVSIHHLIKD
DSACEDFNTAAKLMPPLRSKEDVLALREALKEGKISFLTSLHSAKSISLKDLAFNEAAFGIHSVCEFISLCYTFLIKEGS
LNWQELCQFTSKNSSEFLGLNSGVIEVGKEANLVLFDENEEIFTPKSSLYSEDKLFGRVKMHIIKGKNILEK
>Mature_392_residues
MIIKNAKIYGDSLQDIEIKEGKITNIGSNLQGEEILDAKGMTLLPSFVDLCVSLKNDKFSLANLELLENECLKGGISSIV
LRDCMDFDEESFALFLQNLAQRKMQIFSSMRVKDANGKLKNLATLLNKGACALELDSSLDANILKVSSQYAFMKDSPIFV
RCYDKDFDDNGVMNDCEMSFELGLIGMSKIAETSQIAKMKELAKFYKNKVVFDLLSLKDSLVLLDEKDLKLVSIHHLIKD
DSACEDFNTAAKLMPPLRSKEDVLALREALKEGKISFLTSLHSAKSISLKDLAFNEAAFGIHSVCEFISLCYTFLIKEGS
LNWQELCQFTSKNSSEFLGLNSGVIEVGKEANLVLFDENEEIFTPKSSLYSEDKLFGRVKMHIIKGKNILEK

Specific function: Involved In The Anaerobic Utilization Of Allantoin. [C]

COG id: COG0044

COG function: function code F; Dihydroorotase and related cyclic amidohydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHOase family. Type 2 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006680
- InterPro:   IPR004722
- InterPro:   IPR002195
- InterPro:   IPR011059 [H]

Pfam domain/function: PF01979 Amidohydro_1 [H]

EC number: =3.5.2.3 [H]

Molecular weight: Translated: 43839; Mature: 43839

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIKNAKIYGDSLQDIEIKEGKITNIGSNLQGEEILDAKGMTLLPSFVDLCVSLKNDKFS
CEECCCEEECCCCCCEEECCCEEECCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCEE
LANLELLENECLKGGISSIVLRDCMDFDEESFALFLQNLAQRKMQIFSSMRVKDANGKLK
HHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEECCCCHHH
NLATLLNKGACALELDSSLDANILKVSSQYAFMKDSPIFVRCYDKDFDDNGVMNDCEMSF
HHHHHHCCCCEEEEECCCCCCCEEEECCCEEEECCCCEEEEEECCCCCCCCCCCCCCCEE
ELGLIGMSKIAETSQIAKMKELAKFYKNKVVFDLLSLKDSLVLLDEKDLKLVSIHHLIKD
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHCC
DSACEDFNTAAKLMPPLRSKEDVLALREALKEGKISFLTSLHSAKSISLKDLAFNEAAFG
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHCCHHHHH
IHSVCEFISLCYTFLIKEGSLNWQELCQFTSKNSSEFLGLNSGVIEVGKEANLVLFDENE
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEECCCCHHEECCCCCEEEEECCC
EIFTPKSSLYSEDKLFGRVKMHIIKGKNILEK
CEECCHHHHCCHHHHHEEEEEEEEECCHHHCC
>Mature Secondary Structure
MIIKNAKIYGDSLQDIEIKEGKITNIGSNLQGEEILDAKGMTLLPSFVDLCVSLKNDKFS
CEECCCEEECCCCCCEEECCCEEECCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCEE
LANLELLENECLKGGISSIVLRDCMDFDEESFALFLQNLAQRKMQIFSSMRVKDANGKLK
HHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEECCCCHHH
NLATLLNKGACALELDSSLDANILKVSSQYAFMKDSPIFVRCYDKDFDDNGVMNDCEMSF
HHHHHHCCCCEEEEECCCCCCCEEEECCCEEEECCCCEEEEEECCCCCCCCCCCCCCCEE
ELGLIGMSKIAETSQIAKMKELAKFYKNKVVFDLLSLKDSLVLLDEKDLKLVSIHHLIKD
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHCC
DSACEDFNTAAKLMPPLRSKEDVLALREALKEGKISFLTSLHSAKSISLKDLAFNEAAFG
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHCCHHHHH
IHSVCEFISLCYTFLIKEGSLNWQELCQFTSKNSSEFLGLNSGVIEVGKEANLVLFDENE
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEECCCCHHEECCCCCEEEEECCC
EIFTPKSSLYSEDKLFGRVKMHIIKGKNILEK
CEECCHHHHCCHHHHHEEEEEEEEECCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA