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The map label for this gene is mcp1 [H]

Identifier: 153952258

GI number: 153952258

Start: 486795

End: 488174

Strand: Direct

Name: mcp1 [H]

Synonym: JJD26997_0539

Alternate gene names: 153952258

Gene position: 486795-488174 (Clockwise)

Preceding gene: 153951235

Following gene: 153951873

Centisome position: 26.38

GC content: 30.07

Gene sequence:

>1380_bases
ATGGTGAAAAATGGATTATTATTAACTATTTTTCTAAGTATTATTGGTATTTTAAGTGTCATTTTTTTTCATATTTATGT
TGGAGCGATAATTTTTATTTTAATCGCTGTTTTAATGATTTATTTGCTTAGACAATACAAAGATGAGCAAATAATGATAG
ATAAATTTTTGGTTCTTTGTAGAGAGTTAAAAGAAGGAAATTTTGACAATAGAATCATCTATGTAAAAACAAAAAGCAAA
AAATTAGCCGAAATAGCAGATAATCTTAACAATACTATCGATGGACTAGAAGCTTACTTAAGAGAGATTAATACTTCTAT
TTCTTGTTCTCAGAAAGGTGAATTTTATCGTAAGGCTTTGCCTGAAGGTTTAAAAGGAATTTTTGCTCATAATATCGAAT
TTATAAATAAAGCCTTAGCAAACATAGAAGTGACAGCAAGATCTATTTTTAAAAATGCTTTATCAAGAACTTTAATGGAT
TTAAGTCTTGGAAATCAAAATAAAGATATGTCTCAAATTTCTAACTCATTAAATCAAGATATTAGCAGGATGAAAAATGT
ATATGATACAGTTGATGCCATTGCTCATACAGCTACAGAAAATGGCTCAGAGGTAGATTCTTTACAAAGTGCTATGGGCA
CTTTAATGGATGTTGTAAATTCGAGCAAGGAAACAGTGCAAACTTTTGTGGCTAATTCACAAAATATCACTTCAGTGGTT
GAAGTAATACGCGATATAGCTGATCAAACCAATCTTCTAGCTCTAAATGCTGCTATTGAAGCTGCGCGTGCAGGAGAGCA
TGGTAGGGGCTTTGCGGTTGTGGCTGATGAGGTTAGAAAATTAGCAGAAAGGACTCAAAGATCTACAAGTGAAATTTCTA
TTGCAATTCAGACTATGCAACAAGATTTTGTAAATATCCAAAGTGGCAGTGAGCAAGTTTTTAACATTGTTAGTGAATCT
GAAGAAAGAATTAATAAATTTTCTCAAGCTTTCAAGCGTCTAGAAGAAAATAGTAGTGCTCTTGGTGTTAATTTTGGATC
CTTTGCAAAAAGATTGATTTTATCTGTAGTTAAAATCGATCATATTCTTTATAAATCGAACATATATTTAAATTTAAATG
GAGCTCAAAATTTCAATCTTGAAAGTGTAGATCCAATTTCTAATCTTTGTCAAGATGAGAAAGCTAGGGATGTTATTAAT
GAGCTTAGCTCTGAAACTGAGCTAAATTTGGCTAAAGAATTTATAAAAGATAATGCTAAAAAAGCAATAGAAGAATCAAA
TCAAGATTATATTGATCAAAAAGCTTATGATGTGATTGTAAATGATATTAAATCACTAGAGCAAAGGAGTGCTGAAATCT
TAGCAAAATTAAAAATATAA

Upstream 100 bases:

>100_bases
TTTTATTGTATAATCTCCCGCTAAAAATTAAAGCAGTGCTTCATTAAAGTATTACTTTAATTTATGACTTCAAAAAATTT
TCAATAAAAGGGGTAAATTT

Downstream 100 bases:

>100_bases
ATTAAGAAGGTGGAAAAATGTCAAGGGAAATTTTTTTACAAGAAGATAGTTTAATTACTTCTAAAACAGATTTAAAAGGT
AAAATAGTTTATGCAAACGA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MVKNGLLLTIFLSIIGILSVIFFHIYVGAIIFILIAVLMIYLLRQYKDEQIMIDKFLVLCRELKEGNFDNRIIYVKTKSK
KLAEIADNLNNTIDGLEAYLREINTSISCSQKGEFYRKALPEGLKGIFAHNIEFINKALANIEVTARSIFKNALSRTLMD
LSLGNQNKDMSQISNSLNQDISRMKNVYDTVDAIAHTATENGSEVDSLQSAMGTLMDVVNSSKETVQTFVANSQNITSVV
EVIRDIADQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAERTQRSTSEISIAIQTMQQDFVNIQSGSEQVFNIVSES
EERINKFSQAFKRLEENSSALGVNFGSFAKRLILSVVKIDHILYKSNIYLNLNGAQNFNLESVDPISNLCQDEKARDVIN
ELSSETELNLAKEFIKDNAKKAIEESNQDYIDQKAYDVIVNDIKSLEQRSAEILAKLKI

Sequences:

>Translated_459_residues
MVKNGLLLTIFLSIIGILSVIFFHIYVGAIIFILIAVLMIYLLRQYKDEQIMIDKFLVLCRELKEGNFDNRIIYVKTKSK
KLAEIADNLNNTIDGLEAYLREINTSISCSQKGEFYRKALPEGLKGIFAHNIEFINKALANIEVTARSIFKNALSRTLMD
LSLGNQNKDMSQISNSLNQDISRMKNVYDTVDAIAHTATENGSEVDSLQSAMGTLMDVVNSSKETVQTFVANSQNITSVV
EVIRDIADQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAERTQRSTSEISIAIQTMQQDFVNIQSGSEQVFNIVSES
EERINKFSQAFKRLEENSSALGVNFGSFAKRLILSVVKIDHILYKSNIYLNLNGAQNFNLESVDPISNLCQDEKARDVIN
ELSSETELNLAKEFIKDNAKKAIEESNQDYIDQKAYDVIVNDIKSLEQRSAEILAKLKI
>Mature_459_residues
MVKNGLLLTIFLSIIGILSVIFFHIYVGAIIFILIAVLMIYLLRQYKDEQIMIDKFLVLCRELKEGNFDNRIIYVKTKSK
KLAEIADNLNNTIDGLEAYLREINTSISCSQKGEFYRKALPEGLKGIFAHNIEFINKALANIEVTARSIFKNALSRTLMD
LSLGNQNKDMSQISNSLNQDISRMKNVYDTVDAIAHTATENGSEVDSLQSAMGTLMDVVNSSKETVQTFVANSQNITSVV
EVIRDIADQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAERTQRSTSEISIAIQTMQQDFVNIQSGSEQVFNIVSES
EERINKFSQAFKRLEENSSALGVNFGSFAKRLILSVVKIDHILYKSNIYLNLNGAQNFNLESVDPISNLCQDEKARDVIN
ELSSETELNLAKEFIKDNAKKAIEESNQDYIDQKAYDVIVNDIKSLEQRSAEILAKLKI

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=155, Percent_Identity=38.0645161290323, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI1788195, Length=268, Percent_Identity=28.3582089552239, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI1789453, Length=145, Percent_Identity=38.6206896551724, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI2367378, Length=75, Percent_Identity=56, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1787690, Length=146, Percent_Identity=38.3561643835616, Blast_Score=77, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 51374; Mature: 51374

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKNGLLLTIFLSIIGILSVIFFHIYVGAIIFILIAVLMIYLLRQYKDEQIMIDKFLVLC
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
RELKEGNFDNRIIYVKTKSKKLAEIADNLNNTIDGLEAYLREINTSISCSQKGEFYRKAL
HHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
PEGLKGIFAHNIEFINKALANIEVTARSIFKNALSRTLMDLSLGNQNKDMSQISNSLNQD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
ISRMKNVYDTVDAIAHTATENGSEVDSLQSAMGTLMDVVNSSKETVQTFVANSQNITSVV
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHH
EVIRDIADQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAERTQRSTSEISIAIQTMQ
HHHHHHHCCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
QDFVNIQSGSEQVFNIVSESEERINKFSQAFKRLEENSSALGVNFGSFAKRLILSVVKID
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
HILYKSNIYLNLNGAQNFNLESVDPISNLCQDEKARDVINELSSETELNLAKEFIKDNAK
HHHEECCEEEEECCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHH
KAIEESNQDYIDQKAYDVIVNDIKSLEQRSAEILAKLKI
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVKNGLLLTIFLSIIGILSVIFFHIYVGAIIFILIAVLMIYLLRQYKDEQIMIDKFLVLC
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
RELKEGNFDNRIIYVKTKSKKLAEIADNLNNTIDGLEAYLREINTSISCSQKGEFYRKAL
HHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
PEGLKGIFAHNIEFINKALANIEVTARSIFKNALSRTLMDLSLGNQNKDMSQISNSLNQD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
ISRMKNVYDTVDAIAHTATENGSEVDSLQSAMGTLMDVVNSSKETVQTFVANSQNITSVV
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHH
EVIRDIADQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAERTQRSTSEISIAIQTMQ
HHHHHHHCCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
QDFVNIQSGSEQVFNIVSESEERINKFSQAFKRLEENSSALGVNFGSFAKRLILSVVKID
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
HILYKSNIYLNLNGAQNFNLESVDPISNLCQDEKARDVINELSSETELNLAKEFIKDNAK
HHHEECCEEEEECCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHH
KAIEESNQDYIDQKAYDVIVNDIKSLEQRSAEILAKLKI
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]