Click here to switch to the map view.

The map label for this gene is gpsA [H]

Identifier: 153952074

GI number: 153952074

Start: 480310

End: 481203

Strand: Direct

Name: gpsA [H]

Synonym: JJD26997_0533

Alternate gene names: 153952074

Gene position: 480310-481203 (Clockwise)

Preceding gene: 153951134

Following gene: 153951235

Centisome position: 26.03

GC content: 33.11

Gene sequence:

>894_bases
ATGCGTATAGCGGTTATTGGTGCGGGAAAATGGGGCAGTGCTTTACATCTAGCTTTAAAAGAAAATCACACGTGTTTTAT
CAGTTCTTTGCATCAGCGTGATTTAGAAGATTTTGTTAGTATAAAAGAAGCTTTAGAATGTGAATATCTTATTTTTGCTT
TAAGTTCTCAAGGGATGCGTGTATGGCTTAAAGAAAATTTCATCAACAAAGGACAAAAAATTTTAATTGCTTCAAAAGGC
ATAGAAGATCAAAGTTGTCAATTTTTAGATGAAATTTTCTTAGATTTTGTACCAAAAGAAAATTTTTGTGTTTTAAGTGG
CCCTTCTTTTGCTGCTGAAGTAATGCAAAAACTTCCTACAGCCTTGATGATTAGCGGGATAAATCAAGAGCTTTGTAAAA
AATTTGCAAGTTTTTTTCCTGATTTTATTAAAACTTATATTGATGATGATGTGCGTGGTGCCGAAATTTGTGGTGCTTAT
AAGAATGTTTTAGCGATTGCAAGTGGGATTAGTGATGGGTTAAAACTTGGCAATAATGCAAGAGCAGCACTGATTTCAAG
AGGACTTATAGAAATGCATCGTTTTGGTAAATTTTTTGGCGCTAAAGAAGAAACTTTTTTAGGATTAGGTGGGGCAGGGG
ATTTGTTTTTAACTGCAACCAGTGTTTTATCAAGAAATTATAGAGTGGGTTTAAAACTGGCGCAAAATCAAAAGTTAGAT
AGTATTTTAGCCGAACTTAATGAAGTGGCAGAAGGTGTAAAAACTGCTTATGCTATAGAAAAATTAGCAAAAATGAAGGG
AATTTATACACCTATCGTAAATGAAGTAGTGGCAATTTTTAAGGGTAAAAGTGTGCAAGAAGCAACGCAAAATTTATTAA
AGCAAAATGATTAA

Upstream 100 bases:

>100_bases
ACAAGCTTTTTGGATTCTTTGTGGGTCAAACAATGAAAGAAGGCAAAAGAGCTTTTAATCCTGCAAAAGTGAATGAAATT
TTAAAAGCAAAGCTTGGTTG

Downstream 100 bases:

>100_bases
GGAAAAACCATGATAATTAAAAATGCAAAAATTTATGGAGATTCTTTACAAGATATAGAGATTAAAGAAGGAAAAATTAC
CAATATTGGTTCTAATTTGC

Product: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase

Products: NA

Alternate protein names: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [H]

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MRIAVIGAGKWGSALHLALKENHTCFISSLHQRDLEDFVSIKEALECEYLIFALSSQGMRVWLKENFINKGQKILIASKG
IEDQSCQFLDEIFLDFVPKENFCVLSGPSFAAEVMQKLPTALMISGINQELCKKFASFFPDFIKTYIDDDVRGAEICGAY
KNVLAIASGISDGLKLGNNARAALISRGLIEMHRFGKFFGAKEETFLGLGGAGDLFLTATSVLSRNYRVGLKLAQNQKLD
SILAELNEVAEGVKTAYAIEKLAKMKGIYTPIVNEVVAIFKGKSVQEATQNLLKQND

Sequences:

>Translated_297_residues
MRIAVIGAGKWGSALHLALKENHTCFISSLHQRDLEDFVSIKEALECEYLIFALSSQGMRVWLKENFINKGQKILIASKG
IEDQSCQFLDEIFLDFVPKENFCVLSGPSFAAEVMQKLPTALMISGINQELCKKFASFFPDFIKTYIDDDVRGAEICGAY
KNVLAIASGISDGLKLGNNARAALISRGLIEMHRFGKFFGAKEETFLGLGGAGDLFLTATSVLSRNYRVGLKLAQNQKLD
SILAELNEVAEGVKTAYAIEKLAKMKGIYTPIVNEVVAIFKGKSVQEATQNLLKQND
>Mature_297_residues
MRIAVIGAGKWGSALHLALKENHTCFISSLHQRDLEDFVSIKEALECEYLIFALSSQGMRVWLKENFINKGQKILIASKG
IEDQSCQFLDEIFLDFVPKENFCVLSGPSFAAEVMQKLPTALMISGINQELCKKFASFFPDFIKTYIDDDVRGAEICGAY
KNVLAIASGISDGLKLGNNARAALISRGLIEMHRFGKFFGAKEETFLGLGGAGDLFLTATSVLSRNYRVGLKLAQNQKLD
SILAELNEVAEGVKTAYAIEKLAKMKGIYTPIVNEVVAIFKGKSVQEATQNLLKQND

Specific function: De novo phospholipid biosynthesis; glycerol-3 phosphate formation. [C]

COG id: COG0240

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI24307999, Length=157, Percent_Identity=33.1210191082803, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI33695088, Length=157, Percent_Identity=33.7579617834395, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI1790037, Length=327, Percent_Identity=31.4984709480122, Blast_Score=149, Evalue=3e-37,
Organism=Saccharomyces cerevisiae, GI6320181, Length=196, Percent_Identity=29.5918367346939, Blast_Score=65, Evalue=9e-12,
Organism=Saccharomyces cerevisiae, GI6324513, Length=230, Percent_Identity=28.695652173913, Blast_Score=62, Evalue=8e-11,
Organism=Drosophila melanogaster, GI17136200, Length=146, Percent_Identity=34.2465753424658, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI17136204, Length=146, Percent_Identity=34.2465753424658, Blast_Score=65, Evalue=8e-11,
Organism=Drosophila melanogaster, GI17136202, Length=146, Percent_Identity=34.2465753424658, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR013328
- InterPro:   IPR006168
- InterPro:   IPR006109
- InterPro:   IPR011128
- InterPro:   IPR016040 [H]

Pfam domain/function: PF07479 NAD_Gly3P_dh_C; PF01210 NAD_Gly3P_dh_N [H]

EC number: =1.1.1.94 [H]

Molecular weight: Translated: 32703; Mature: 32703

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: PS00957 NAD_G3PDH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIAVIGAGKWGSALHLALKENHTCFISSLHQRDLEDFVSIKEALECEYLIFALSSQGMR
CEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCE
VWLKENFINKGQKILIASKGIEDQSCQFLDEIFLDFVPKENFCVLSGPSFAAEVMQKLPT
EEEHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCH
ALMISGINQELCKKFASFFPDFIKTYIDDDVRGAEICGAYKNVLAIASGISDGLKLGNNA
HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH
RAALISRGLIEMHRFGKFFGAKEETFLGLGGAGDLFLTATSVLSRNYRVGLKLAQNQKLD
HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCHH
SILAELNEVAEGVKTAYAIEKLAKMKGIYTPIVNEVVAIFKGKSVQEATQNLLKQND
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MRIAVIGAGKWGSALHLALKENHTCFISSLHQRDLEDFVSIKEALECEYLIFALSSQGMR
CEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCE
VWLKENFINKGQKILIASKGIEDQSCQFLDEIFLDFVPKENFCVLSGPSFAAEVMQKLPT
EEEHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCH
ALMISGINQELCKKFASFFPDFIKTYIDDDVRGAEICGAYKNVLAIASGISDGLKLGNNA
HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH
RAALISRGLIEMHRFGKFFGAKEETFLGLGGAGDLFLTATSVLSRNYRVGLKLAQNQKLD
HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCHH
SILAELNEVAEGVKTAYAIEKLAKMKGIYTPIVNEVVAIFKGKSVQEATQNLLKQND
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA