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The map label for this gene is 153930585

Identifier: 153930585

GI number: 153930585

Start: 16248

End: 16868

Strand: Direct

Name: 153930585

Synonym: YpsIP31758_A0057

Alternate gene names: NA

Gene position: 16248-16868 (Clockwise)

Preceding gene: 153930596

Following gene: 153930622

Centisome position: 27.69

GC content: 41.71

Gene sequence:

>621_bases
ATGGTTTTCCTTGATCTACCACCTCAATTACATGAGCGCGTTGTTTGTTCAATTACCTCTGCATTAAAGTACGAGGTACC
GGCCAACATTGTACTTGGTATCGCTGAAAAAGAAGGCGGTAAGCCAGGGCAATGGGTCAAAAATACCAACGGTACTCACG
ATGTTGGCCCATTACAGTTTAATACTCAGTATTTAAAAGAATTAAGCAAGTATGGTATTACCGCAGAAGATGTCGCTCAA
GCAGGGTGTTATTCATATGATCTTGCTGCCTGGAGGTTGCGTGGCCATCTTATGAATGACAAGGGAGATATATGGACAAG
AGCCGCCAATTATCATTCCCGAACACCAAAGTTTAATGCGCCATATCGTGCTGACCTGATACAGAAAGCAACTAAATGGG
GAGATTGGCTTGAAGCGCGATTTGTAACTTATACGGTTACGACTCCTGGAGCGGCACCTGCGAGGATTGCTAGCAGAATT
ACGACTGTAGCCAAACCACAAAATGAAATTGTAAAAAAAACAATTGAAGTTAAATCGATTAGTAATATTGAAAAAAAATA
CAATCCGGCAGCAGCTCAAGCGCTTGCTTCCGTATTTGCTCCAAAAATGGGAAATAATTAA

Upstream 100 bases:

>100_bases
CCAGAAACCGATGAAGAAATGATTGATCAATTTGTTAATAAAAAATGATGGGCAGGAGCTTAATTATGAACACAACAAAT
ACATCAGCAGGAGAATAATT

Downstream 100 bases:

>100_bases
TACAGGTATCACTCAGTTTTAAACGGTTAAATGTAGTTAAAATTTGCTAACTCACAAAATCCCCAATTCTGGCGTGATTT
TGGCGGAGCTTGCCCAATAG

Product: conjugal transfer protein TrbN

Products: NA

Alternate protein names: Lytic Transglycosylase Catalytic; TrbN Protein; Lytic Transglycosylase; Conjugal Transfer Protein; Muramidase TrbN; Lytic Murein Transglycosylase; TrbN Protein Of DNA Transfer System; Pilin Biogenesis Protein

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MVFLDLPPQLHERVVCSITSALKYEVPANIVLGIAEKEGGKPGQWVKNTNGTHDVGPLQFNTQYLKELSKYGITAEDVAQ
AGCYSYDLAAWRLRGHLMNDKGDIWTRAANYHSRTPKFNAPYRADLIQKATKWGDWLEARFVTYTVTTPGAAPARIASRI
TTVAKPQNEIVKKTIEVKSISNIEKKYNPAAAQALASVFAPKMGNN

Sequences:

>Translated_206_residues
MVFLDLPPQLHERVVCSITSALKYEVPANIVLGIAEKEGGKPGQWVKNTNGTHDVGPLQFNTQYLKELSKYGITAEDVAQ
AGCYSYDLAAWRLRGHLMNDKGDIWTRAANYHSRTPKFNAPYRADLIQKATKWGDWLEARFVTYTVTTPGAAPARIASRI
TTVAKPQNEIVKKTIEVKSISNIEKKYNPAAAQALASVFAPKMGNN
>Mature_206_residues
MVFLDLPPQLHERVVCSITSALKYEVPANIVLGIAEKEGGKPGQWVKNTNGTHDVGPLQFNTQYLKELSKYGITAEDVAQ
AGCYSYDLAAWRLRGHLMNDKGDIWTRAANYHSRTPKFNAPYRADLIQKATKWGDWLEARFVTYTVTTPGAAPARIASRI
TTVAKPQNEIVKKTIEVKSISNIEKKYNPAAAQALASVFAPKMGNN

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22807; Mature: 22807

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFLDLPPQLHERVVCSITSALKYEVPANIVLGIAEKEGGKPGQWVKNTNGTHDVGPLQF
CEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEE
NTQYLKELSKYGITAEDVAQAGCYSYDLAAWRLRGHLMNDKGDIWTRAANYHSRTPKFNA
CHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEHHCCCCCCCCCCCC
PYRADLIQKATKWGDWLEARFVTYTVTTPGAAPARIASRITTVAKPQNEIVKKTIEVKSI
CHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
SNIEKKYNPAAAQALASVFAPKMGNN
HHHHHHCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVFLDLPPQLHERVVCSITSALKYEVPANIVLGIAEKEGGKPGQWVKNTNGTHDVGPLQF
CEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEE
NTQYLKELSKYGITAEDVAQAGCYSYDLAAWRLRGHLMNDKGDIWTRAANYHSRTPKFNA
CHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEHHCCCCCCCCCCCC
PYRADLIQKATKWGDWLEARFVTYTVTTPGAAPARIASRITTVAKPQNEIVKKTIEVKSI
CHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
SNIEKKYNPAAAQALASVFAPKMGNN
HHHHHHCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA