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The map label for this gene is trbL [H]

Identifier: 153930596

GI number: 153930596

Start: 14774

End: 16195

Strand: Direct

Name: trbL [H]

Synonym: YpsIP31758_A0056

Alternate gene names: 153930596

Gene position: 14774-16195 (Clockwise)

Preceding gene: 153930607

Following gene: 153930585

Centisome position: 25.18

GC content: 46.2

Gene sequence:

>1422_bases
GTGACTGTTTTAGAACTGGTAATTTCGAAAAAAGTCCTGAGAAAAAGTGGTAACACCATGAAAAAAATCTCTCTGTCCGT
ATTAGCTGTAGTGCTCCTGATTGTGGCTCTTCAGGCGCAAGCTGGCACCGGCATTAATAGTGCTGGCTTACTTGATGACA
TATTAGAACGTTTCGCTAATACGGCCTCCGGATGGGGAGATCGCATAGTTAGCTATGGTCTGTGGCTATTTTGGGGACTA
ACCCTTCTTAGCATGGTATGGACTTACGGCATGATGGTATTAAAGAAATCGGATATTCAAGAGTTCTTTGCGGAAACAAT
ACGTTTTCTAGCCGCCACCGGTTTCTTTTTATGGATATTAGTTAATGGCCCAGCCATTGCTATTTCAATAATTAATACCT
GCCGCCAAATAGCGGCTAACGCTTCTGGTTTAAGTAATGCTTTATCACCGTCAGGCATTGTAGATATTGGTTTCGATATT
GCCGGAAAAGTGGTTGATAAATCATCTATATGGTCACCGGCTGACTCCACTGTTGGACTGTTGGTTGCAACCGTTATTTT
ATGCATGTTGGCCCTAGTCGCAATCAACATGCTCTTAATGCTAATTACCGGCTGGCTCTTAGCTTACGCTGGCGTTTTTA
TTCTTGGATTCGGCGGTGGCCATTGGACTCAAGATATTGCCATAGCGTATTACAAGCAAGTACTCGGGGTAGGTATACAG
ACTTTCGTCATGATCCTCTTAGTCGGTATTGGGCAATCATTTATTGACCAGTATTACGCGGCGATGGGTGATGACATGGC
CCTTAAAGAACTGTTGGTTATGCTCGTTGCTTCCTTCGTTCTATTAATGTTAGTTGCTCAACTACCACCAATGTTTGCGG
GAATTGTCGGAGCCGGTTCTGGAGGCGGTTCATTGGCGTTCGGTATGGGGGCGGCCCTTGGAGCAGCAGGTATGGCCGCA
GCTACAGCAGGTGCCGCTGGTGCCGCCGCAATCAGTGGAGCAACAAGCGCCGCAGGTGGAATGTCAGCGCTTCAGGCAGC
ATTTGAATCAGCGCAGCAAAGCATGGACGCTGGCAGTAGCCCTAGTGGTGAAGGACGTAGCTCTTCAGGTGGAAGTCTTT
CAGAAGCAATGGGAAGGGCGGGGGGTTTTGCTAGGTCGATGGGATCAAGTCTTGTCGATGCTGCCCGTGATGTTGCTCAA
GAAAAAGCTGGAGCAATAAAAGACTCAATTCAGGAAAGAGTCTCTGAAACCACTGGTGGAAAAATGGCTGACTCGATCCG
TGAAAGTAGTGGAATGAATATTGGAAATGATAACAGTCAATTTGATGGTGATGGTCTAGGGGCTGGAAACAATGCAGGAA
ATAGCGCTTCCACACCAGAAACCGATGAAGAAATGATTGATCAATTTGTTAATAAAAAATGA

Upstream 100 bases:

>100_bases
GGTTTTCTAGTTGGCTGCGACAACCCAACAGTTGCAACAGAAAAACAGCCATGTGAAAACAAAAATGAGTTAACAAAAGC
TGAACAACAGGCGATTGCTA

Downstream 100 bases:

>100_bases
TGGGCAGGAGCTTAATTATGAACACAACAAATACATCAGCAGGAGAATAATTATGGTTTTCCTTGATCTACCACCTCAAT
TACATGAGCGCGTTGTTTGT

Product: conjugal transfer protein TrbL/VirB6

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 472

Protein sequence:

>473_residues
MTVLELVISKKVLRKSGNTMKKISLSVLAVVLLIVALQAQAGTGINSAGLLDDILERFANTASGWGDRIVSYGLWLFWGL
TLLSMVWTYGMMVLKKSDIQEFFAETIRFLAATGFFLWILVNGPAIAISIINTCRQIAANASGLSNALSPSGIVDIGFDI
AGKVVDKSSIWSPADSTVGLLVATVILCMLALVAINMLLMLITGWLLAYAGVFILGFGGGHWTQDIAIAYYKQVLGVGIQ
TFVMILLVGIGQSFIDQYYAAMGDDMALKELLVMLVASFVLLMLVAQLPPMFAGIVGAGSGGGSLAFGMGAALGAAGMAA
ATAGAAGAAAISGATSAAGGMSALQAAFESAQQSMDAGSSPSGEGRSSSGGSLSEAMGRAGGFARSMGSSLVDAARDVAQ
EKAGAIKDSIQERVSETTGGKMADSIRESSGMNIGNDNSQFDGDGLGAGNNAGNSASTPETDEEMIDQFVNKK

Sequences:

>Translated_473_residues
MTVLELVISKKVLRKSGNTMKKISLSVLAVVLLIVALQAQAGTGINSAGLLDDILERFANTASGWGDRIVSYGLWLFWGL
TLLSMVWTYGMMVLKKSDIQEFFAETIRFLAATGFFLWILVNGPAIAISIINTCRQIAANASGLSNALSPSGIVDIGFDI
AGKVVDKSSIWSPADSTVGLLVATVILCMLALVAINMLLMLITGWLLAYAGVFILGFGGGHWTQDIAIAYYKQVLGVGIQ
TFVMILLVGIGQSFIDQYYAAMGDDMALKELLVMLVASFVLLMLVAQLPPMFAGIVGAGSGGGSLAFGMGAALGAAGMAA
ATAGAAGAAAISGATSAAGGMSALQAAFESAQQSMDAGSSPSGEGRSSSGGSLSEAMGRAGGFARSMGSSLVDAARDVAQ
EKAGAIKDSIQERVSETTGGKMADSIRESSGMNIGNDNSQFDGDGLGAGNNAGNSASTPETDEEMIDQFVNKK
>Mature_472_residues
TVLELVISKKVLRKSGNTMKKISLSVLAVVLLIVALQAQAGTGINSAGLLDDILERFANTASGWGDRIVSYGLWLFWGLT
LLSMVWTYGMMVLKKSDIQEFFAETIRFLAATGFFLWILVNGPAIAISIINTCRQIAANASGLSNALSPSGIVDIGFDIA
GKVVDKSSIWSPADSTVGLLVATVILCMLALVAINMLLMLITGWLLAYAGVFILGFGGGHWTQDIAIAYYKQVLGVGIQT
FVMILLVGIGQSFIDQYYAAMGDDMALKELLVMLVASFVLLMLVAQLPPMFAGIVGAGSGGGSLAFGMGAALGAAGMAAA
TAGAAGAAAISGATSAAGGMSALQAAFESAQQSMDAGSSPSGEGRSSSGGSLSEAMGRAGGFARSMGSSLVDAARDVAQE
KAGAIKDSIQERVSETTGGKMADSIRESSGMNIGNDNSQFDGDGLGAGNNAGNSASTPETDEEMIDQFVNKK

Specific function: Unknown

COG id: COG3846

COG function: function code U; Type IV secretory pathway, TrbL components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbL/virB6 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014150
- InterPro:   IPR007688 [H]

Pfam domain/function: PF04610 TrbL [H]

EC number: NA

Molecular weight: Translated: 48605; Mature: 48474

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVLELVISKKVLRKSGNTMKKISLSVLAVVLLIVALQAQAGTGINSAGLLDDILERFAN
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
TASGWGDRIVSYGLWLFWGLTLLSMVWTYGMMVLKKSDIQEFFAETIRFLAATGFFLWIL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
VNGPAIAISIINTCRQIAANASGLSNALSPSGIVDIGFDIAGKVVDKSSIWSPADSTVGL
ECCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEECHHHHHHHHCCCCCCCCCCHHHHH
LVATVILCMLALVAINMLLMLITGWLLAYAGVFILGFGGGHWTQDIAIAYYKQVLGVGIQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHH
TFVMILLVGIGQSFIDQYYAAMGDDMALKELLVMLVASFVLLMLVAQLPPMFAGIVGAGS
HHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC
GGGSLAFGMGAALGAAGMAAATAGAAGAAAISGATSAAGGMSALQAAFESAQQSMDAGSS
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PSGEGRSSSGGSLSEAMGRAGGFARSMGSSLVDAARDVAQEKAGAIKDSIQERVSETTGG
CCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KMADSIRESSGMNIGNDNSQFDGDGLGAGNNAGNSASTPETDEEMIDQFVNKK
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
TVLELVISKKVLRKSGNTMKKISLSVLAVVLLIVALQAQAGTGINSAGLLDDILERFAN
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
TASGWGDRIVSYGLWLFWGLTLLSMVWTYGMMVLKKSDIQEFFAETIRFLAATGFFLWIL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
VNGPAIAISIINTCRQIAANASGLSNALSPSGIVDIGFDIAGKVVDKSSIWSPADSTVGL
ECCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEECHHHHHHHHCCCCCCCCCCHHHHH
LVATVILCMLALVAINMLLMLITGWLLAYAGVFILGFGGGHWTQDIAIAYYKQVLGVGIQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHH
TFVMILLVGIGQSFIDQYYAAMGDDMALKELLVMLVASFVLLMLVAQLPPMFAGIVGAGS
HHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC
GGGSLAFGMGAALGAAGMAAATAGAAGAAAISGATSAAGGMSALQAAFESAQQSMDAGSS
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PSGEGRSSSGGSLSEAMGRAGGFARSMGSSLVDAARDVAQEKAGAIKDSIQERVSETTGG
CCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KMADSIRESSGMNIGNDNSQFDGDGLGAGNNAGNSASTPETDEEMIDQFVNKK
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]