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The map label for this gene is yitL [H]

Identifier: 153935537

GI number: 153935537

Start: 1818648

End: 1819484

Strand: Direct

Name: yitL [H]

Synonym: CLC_1722

Alternate gene names: 153935537

Gene position: 1818648-1819484 (Clockwise)

Preceding gene: 153934793

Following gene: 153936334

Centisome position: 48.36

GC content: 29.27

Gene sequence:

>837_bases
ATGATAAAGTTAGGTGAAATACAAAAGTTAGAAATAATAAGAGAGGCTCCTATGGGAGTATATTTAAATTCTAAAGAGGA
TAAAAGTGAAAATGATATATTATTACCTGGAAAACAAGTGCCTAAAGATGCTAAAATAGGTGATGAAGTAGAAGTCTTTG
TTTATAGGGATTCAGAAGATAGGATGATAGCTACCATAAATAGGCCTAAAATAACTATTGGGGAAATAGCTACTTTAAAG
GTTATAGAAAAAACTAAAATGGGAGCTTTTCTAGACTGGGGACTAGAAAGAGATTTATTTTTACCATTTAAAGAACAAAC
TTACGGTATACAGGAAGGAATGGAATGTTTAGTTTATTTATACATAGACAAAAGCGATAGACTATGTGCTAGTATGAATG
TATATAGAGTATTAAGTACAGAATCCCCTTATAAAGAGGATGATGAAGTTAAAGGGTTTATATATGATATAAAAAGAGAA
ATAGGAGCTTTTGTTGCTGTAGACAATGAATACCATGGATTAATACCTAAAAATGAATTATATGGAAAGTTTAGATATGG
AGATATAGTGGAGGCTAGAGTAACTAAAGTAAAGGAAGATGGTAAACTAGATTTAAGTATTAGAAAAAAAGCATACAAAC
AAATGGATGAGGATGTAGATACTATTTTAGAAAAGCTAAATTCTAATGGCGGTAAGCTTTATTTAAATGATAATAGTGAT
CCAAGAGCTATAAAGGAACTTTTAAATATGAGTAAAAATGCATTTAAAAGAGCAGTAGGAAGACTTTTAAAAGAAGGTAA
AATAGAATTTATTGAAAAGGGCATTAAGCTTAAATAA

Upstream 100 bases:

>100_bases
AAATTGTGGTAAATAATTAATAATTTTAAAAATTATTGTTTAATATAAATAGATTATTTTACATAAATAGTATTAAATTA
ATTAATAAAGAAGGTGCAGT

Downstream 100 bases:

>100_bases
AAGAAAGAGCATCTGCTATATTGGATCTAACCAAAAGTAGATGCTTTTATTTAATTAAACTAAGTAATATTTTTGTAGTT
TAGAATTATGGAATTTGTGT

Product: RNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MIKLGEIQKLEIIREAPMGVYLNSKEDKSENDILLPGKQVPKDAKIGDEVEVFVYRDSEDRMIATINRPKITIGEIATLK
VIEKTKMGAFLDWGLERDLFLPFKEQTYGIQEGMECLVYLYIDKSDRLCASMNVYRVLSTESPYKEDDEVKGFIYDIKRE
IGAFVAVDNEYHGLIPKNELYGKFRYGDIVEARVTKVKEDGKLDLSIRKKAYKQMDEDVDTILEKLNSNGGKLYLNDNSD
PRAIKELLNMSKNAFKRAVGRLLKEGKIEFIEKGIKLK

Sequences:

>Translated_278_residues
MIKLGEIQKLEIIREAPMGVYLNSKEDKSENDILLPGKQVPKDAKIGDEVEVFVYRDSEDRMIATINRPKITIGEIATLK
VIEKTKMGAFLDWGLERDLFLPFKEQTYGIQEGMECLVYLYIDKSDRLCASMNVYRVLSTESPYKEDDEVKGFIYDIKRE
IGAFVAVDNEYHGLIPKNELYGKFRYGDIVEARVTKVKEDGKLDLSIRKKAYKQMDEDVDTILEKLNSNGGKLYLNDNSD
PRAIKELLNMSKNAFKRAVGRLLKEGKIEFIEKGIKLK
>Mature_278_residues
MIKLGEIQKLEIIREAPMGVYLNSKEDKSENDILLPGKQVPKDAKIGDEVEVFVYRDSEDRMIATINRPKITIGEIATLK
VIEKTKMGAFLDWGLERDLFLPFKEQTYGIQEGMECLVYLYIDKSDRLCASMNVYRVLSTESPYKEDDEVKGFIYDIKRE
IGAFVAVDNEYHGLIPKNELYGKFRYGDIVEARVTKVKEDGKLDLSIRKKAYKQMDEDVDTILEKLNSNGGKLYLNDNSD
PRAIKELLNMSKNAFKRAVGRLLKEGKIEFIEKGIKLK

Specific function: Unknown

COG id: COG2996

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR022967
- InterPro:   IPR014464 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31923; Mature: 31923

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLGEIQKLEIIREAPMGVYLNSKEDKSENDILLPGKQVPKDAKIGDEVEVFVYRDSED
CCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCEECCCCCCCCCCCCCCCEEEEEEECCCC
RMIATINRPKITIGEIATLKVIEKTKMGAFLDWGLERDLFLPFKEQTYGIQEGMECLVYL
CEEEEECCCEEEECCHHEEEEHHHHHCCHHHHCCCCCCEECCCHHHHCCHHHCCEEEEEE
YIDKSDRLCASMNVYRVLSTESPYKEDDEVKGFIYDIKREIGAFVAVDNEYHGLIPKNEL
EECCCCCEEHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCEEEEECCCCCCCCCCHHH
YGKFRYGDIVEARVTKVKEDGKLDLSIRKKAYKQMDEDVDTILEKLNSNGGKLYLNDNSD
CEEECCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
PRAIKELLNMSKNAFKRAVGRLLKEGKIEFIEKGIKLK
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCC
>Mature Secondary Structure
MIKLGEIQKLEIIREAPMGVYLNSKEDKSENDILLPGKQVPKDAKIGDEVEVFVYRDSED
CCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCEECCCCCCCCCCCCCCCEEEEEEECCCC
RMIATINRPKITIGEIATLKVIEKTKMGAFLDWGLERDLFLPFKEQTYGIQEGMECLVYL
CEEEEECCCEEEECCHHEEEEHHHHHCCHHHHCCCCCCEECCCHHHHCCHHHCCEEEEEE
YIDKSDRLCASMNVYRVLSTESPYKEDDEVKGFIYDIKREIGAFVAVDNEYHGLIPKNEL
EECCCCCEEHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCEEEEECCCCCCCCCCHHH
YGKFRYGDIVEARVTKVKEDGKLDLSIRKKAYKQMDEDVDTILEKLNSNGGKLYLNDNSD
CEEECCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
PRAIKELLNMSKNAFKRAVGRLLKEGKIEFIEKGIKLK
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377 [H]