| Definition | Clostridium botulinum A str. Hall, complete genome. |
|---|---|
| Accession | NC_009698 |
| Length | 3,760,560 |
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The map label for this gene is cshA [H]
Identifier: 153934793
GI number: 153934793
Start: 1817060
End: 1818325
Strand: Direct
Name: cshA [H]
Synonym: CLC_1721
Alternate gene names: 153934793
Gene position: 1817060-1818325 (Clockwise)
Preceding gene: 153936092
Following gene: 153935537
Centisome position: 48.32
GC content: 26.86
Gene sequence:
>1266_bases ATGAATAATTCATTTGATACATTAAATTTGAATCCTAAATTAGTTCAGGGACTAAAAAAGTTAAATATAAATATACCCAC AGAAATTCAAGCTGAAGCTATACCTTTAGCTATGGAAAATAAAGATATAATAGGTCAGTCAGAAACAGGTACGGGAAAAA CTTTAGCCTATTTATTGCCTATATTTGAAAAAATAACTACAGAAAAAAGAGAAATGCAAGCTATTATATTAGCTCCTACC CATGAGTTAGCTATGCAAATAAATAACGAAATAAAAAATATATCTTCAAATTCAAATATGGATGTAAAATCTATGGCTAT AATAGGAGAAGCAAATATAAAAAGACAGATTGAAAAATTAAAAGAAAAGCCACATATTATTGTGGGGTCTCCAGGAAGAA TATTAGAGCTTATAAAGAAAAAAAAGATAACTGCCCATACAGTTAAAACTATAGTTATAGATGAGGGAGATAAACTTTTA GATAAGAATAATTTAAAAGTAGTAAAAGAGGTAATAAAAACAACTCTAAGAGAAAGACAGTTAATGTTATTTTCAGCCAC AATAACTGAATCTACTTTAAATATTGCAAAGGATTTAATGAAAGATTCAGTAATAGTAAAAGTTAAAGAAAAAAATACTG TAAATGAAAATATTAAGCATTTATATATTACTGGAGAGCATAGAGAAAGAATTGAAATTTTAAGGAAACTTATAGCAGCT ACAAATCCTAAAAGAGCTATTGTATTTATAAATAGAAATGAAGAAATAGAATTAACTACACTAAAACTTCAATATCATAA AATTAAAGCCTATGGTATATATGGTGCTGCAGAAAAAGAGCAACGTAAAAAAGCTTTAGAAGATTTTAGATCAGGAAAAG TTCAAATATTAGTTTCATCAGATTTATCCGCCAGAGGGCTGGATGTAAAAGATGTAACTCACATATTCAATTTAGATTTA CCTGAAAATCCAAAGGAATATTTGCATAGAGTAGGAAGAACAGGAAGAGCTTCTAAGGAAGGAATTGCTATTTCAATAAT AACAGAAAAAGAGAAAGCATTGATAAGAAAGTATGAAAAAGAGTTTAATATTAATATAGAGGAAAAAAAGATTTATAAAG GAACTTTGATTAGTTCTAAAGGAGAAAGATCTAGCCAGCCAAAGAGTAAAAACAAATCTACTTCAGCACATAAAGATAAT AATAAAAAGAAAAGAAGTAGTTCTATAAATAAATCAAAAAACAACCATAAAAAGAAAAAATATTAA
Upstream 100 bases:
>100_bases AGATGTATTACTTTCTTGACAAAATGATTTCCTAAGTTTAAACTTATATAAGTTTTTAATTATAAATATAATTTACATAC ATTATATAAAGGAGAATAGT
Downstream 100 bases:
>100_bases TTTAATAACATAAAAAGGTGGTGTCTTAAAATAAAAGTTATTTTGAGGCTCCTCCTTTTGTTTTGAAAATATAAAGAGTG GTAATGTATTATTAAGTATA
Product: DEAD-box ATP dependent DNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MNNSFDTLNLNPKLVQGLKKLNINIPTEIQAEAIPLAMENKDIIGQSETGTGKTLAYLLPIFEKITTEKREMQAIILAPT HELAMQINNEIKNISSNSNMDVKSMAIIGEANIKRQIEKLKEKPHIIVGSPGRILELIKKKKITAHTVKTIVIDEGDKLL DKNNLKVVKEVIKTTLRERQLMLFSATITESTLNIAKDLMKDSVIVKVKEKNTVNENIKHLYITGEHRERIEILRKLIAA TNPKRAIVFINRNEEIELTTLKLQYHKIKAYGIYGAAEKEQRKKALEDFRSGKVQILVSSDLSARGLDVKDVTHIFNLDL PENPKEYLHRVGRTGRASKEGIAISIITEKEKALIRKYEKEFNINIEEKKIYKGTLISSKGERSSQPKSKNKSTSAHKDN NKKKRSSSINKSKNNHKKKKY
Sequences:
>Translated_421_residues MNNSFDTLNLNPKLVQGLKKLNINIPTEIQAEAIPLAMENKDIIGQSETGTGKTLAYLLPIFEKITTEKREMQAIILAPT HELAMQINNEIKNISSNSNMDVKSMAIIGEANIKRQIEKLKEKPHIIVGSPGRILELIKKKKITAHTVKTIVIDEGDKLL DKNNLKVVKEVIKTTLRERQLMLFSATITESTLNIAKDLMKDSVIVKVKEKNTVNENIKHLYITGEHRERIEILRKLIAA TNPKRAIVFINRNEEIELTTLKLQYHKIKAYGIYGAAEKEQRKKALEDFRSGKVQILVSSDLSARGLDVKDVTHIFNLDL PENPKEYLHRVGRTGRASKEGIAISIITEKEKALIRKYEKEFNINIEEKKIYKGTLISSKGERSSQPKSKNKSTSAHKDN NKKKRSSSINKSKNNHKKKKY >Mature_421_residues MNNSFDTLNLNPKLVQGLKKLNINIPTEIQAEAIPLAMENKDIIGQSETGTGKTLAYLLPIFEKITTEKREMQAIILAPT HELAMQINNEIKNISSNSNMDVKSMAIIGEANIKRQIEKLKEKPHIIVGSPGRILELIKKKKITAHTVKTIVIDEGDKLL DKNNLKVVKEVIKTTLRERQLMLFSATITESTLNIAKDLMKDSVIVKVKEKNTVNENIKHLYITGEHRERIEILRKLIAA TNPKRAIVFINRNEEIELTTLKLQYHKIKAYGIYGAAEKEQRKKALEDFRSGKVQILVSSDLSARGLDVKDVTHIFNLDL PENPKEYLHRVGRTGRASKEGIAISIITEKEKALIRKYEKEFNINIEEKKIYKGTLISSKGERSSQPKSKNKSTSAHKDN NKKKRSSSINKSKNNHKKKKY
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. In vitro, unwinds dsRNA in both 5'- and 3'- directions and shows RNA-dependent ATPase activity. Required for vegetative grow
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid. Note=Shows transcription-dependent localization at subcellular sites surrounding the nucleoid. Associated with free 50S ribosomal subunit, 70S ribosome and polysomes [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI7661920, Length=375, Percent_Identity=31.2, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI164664518, Length=369, Percent_Identity=31.7073170731707, Blast_Score=225, Evalue=6e-59, Organism=Homo sapiens, GI4503529, Length=377, Percent_Identity=32.3607427055703, Blast_Score=225, Evalue=8e-59, Organism=Homo sapiens, GI83700235, Length=377, Percent_Identity=32.3607427055703, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI222352149, Length=351, Percent_Identity=33.048433048433, Blast_Score=219, Evalue=4e-57, Organism=Homo sapiens, GI20149629, Length=357, Percent_Identity=31.9327731092437, Blast_Score=205, Evalue=7e-53, Organism=Homo sapiens, GI301171475, Length=348, Percent_Identity=31.8965517241379, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI55749865, Length=357, Percent_Identity=31.6526610644258, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI87196351, Length=348, Percent_Identity=31.8965517241379, Blast_Score=203, Evalue=2e-52, Organism=Homo sapiens, GI301171467, Length=348, Percent_Identity=31.8965517241379, Blast_Score=203, Evalue=2e-52, Organism=Homo sapiens, GI169881239, Length=348, Percent_Identity=31.6091954022989, Blast_Score=201, Evalue=8e-52, Organism=Homo sapiens, GI13514809, Length=348, Percent_Identity=31.6091954022989, Blast_Score=201, Evalue=8e-52, Organism=Homo sapiens, GI262118318, Length=362, Percent_Identity=32.0441988950276, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI216548263, Length=362, Percent_Identity=32.0441988950276, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI262231852, Length=362, Percent_Identity=32.0441988950276, Blast_Score=196, Evalue=2e-50, Organism=Homo sapiens, GI13518015, Length=362, Percent_Identity=32.0441988950276, Blast_Score=196, Evalue=3e-50, Organism=Homo sapiens, GI21071032, Length=367, Percent_Identity=29.700272479564, Blast_Score=196, Evalue=4e-50, Organism=Homo sapiens, GI41327771, Length=388, Percent_Identity=28.0927835051546, Blast_Score=195, Evalue=8e-50, Organism=Homo sapiens, GI21040371, Length=371, Percent_Identity=28.8409703504043, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI224593278, Length=363, Percent_Identity=28.6501377410468, Blast_Score=191, Evalue=8e-49, Organism=Homo sapiens, GI45446747, Length=369, Percent_Identity=28.9972899728997, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI45446743, Length=369, Percent_Identity=28.9972899728997, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI8922886, Length=376, Percent_Identity=31.6489361702128, Blast_Score=189, Evalue=4e-48, Organism=Homo sapiens, GI51094101, Length=354, Percent_Identity=29.6610169491525, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI164419743, Length=354, Percent_Identity=29.6610169491525, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI4758112, Length=371, Percent_Identity=28.3018867924528, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI18375623, Length=371, Percent_Identity=28.3018867924528, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI4758138, Length=354, Percent_Identity=29.9435028248588, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI6005743, Length=376, Percent_Identity=31.1170212765957, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI164419732, Length=363, Percent_Identity=31.404958677686, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI148613856, Length=355, Percent_Identity=29.0140845070423, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI38201710, Length=355, Percent_Identity=29.0140845070423, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI41327776, Length=357, Percent_Identity=30.812324929972, Blast_Score=183, Evalue=2e-46, Organism=Homo sapiens, GI13514831, Length=364, Percent_Identity=29.6703296703297, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI41327773, Length=371, Percent_Identity=28.8409703504043, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI31542656, Length=373, Percent_Identity=26.8096514745308, Blast_Score=182, Evalue=4e-46, Organism=Homo sapiens, GI188035877, Length=362, Percent_Identity=29.8342541436464, Blast_Score=176, Evalue=4e-44, Organism=Homo sapiens, GI38569505, Length=358, Percent_Identity=29.8882681564246, Blast_Score=170, Evalue=3e-42, Organism=Homo sapiens, GI38569503, Length=358, Percent_Identity=29.8882681564246, Blast_Score=169, Evalue=3e-42, Organism=Homo sapiens, GI62241022, Length=359, Percent_Identity=30.3621169916435, Blast_Score=169, Evalue=3e-42, Organism=Homo sapiens, GI50659095, Length=385, Percent_Identity=29.0909090909091, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI13129006, Length=383, Percent_Identity=26.8929503916449, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI38327634, Length=379, Percent_Identity=29.8153034300792, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI41327779, Length=376, Percent_Identity=28.1914893617021, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI256223453, Length=373, Percent_Identity=29.2225201072386, Blast_Score=163, Evalue=2e-40, Organism=Homo sapiens, GI62241024, Length=337, Percent_Identity=30.2670623145401, Blast_Score=159, Evalue=4e-39, Organism=Homo sapiens, GI17505907, Length=429, Percent_Identity=26.1072261072261, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI9506931, Length=395, Percent_Identity=25.8227848101266, Blast_Score=149, Evalue=4e-36, Organism=Homo sapiens, GI256773275, Length=402, Percent_Identity=24.3781094527363, Blast_Score=125, Evalue=9e-29, Organism=Homo sapiens, GI154759257, Length=426, Percent_Identity=23.943661971831, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI9966805, Length=309, Percent_Identity=27.1844660194175, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI4826686, Length=343, Percent_Identity=26.2390670553936, Blast_Score=113, Evalue=3e-25, Organism=Homo sapiens, GI20336298, Length=222, Percent_Identity=30.1801801801802, Blast_Score=104, Evalue=1e-22, Organism=Escherichia coli, GI1787016, Length=364, Percent_Identity=32.6923076923077, Blast_Score=238, Evalue=8e-64, Organism=Escherichia coli, GI87082221, Length=381, Percent_Identity=29.3963254593176, Blast_Score=211, Evalue=8e-56, Organism=Escherichia coli, GI1787605, Length=350, Percent_Identity=30.8571428571429, Blast_Score=206, Evalue=2e-54, Organism=Escherichia coli, GI1790214, Length=414, Percent_Identity=29.7101449275362, Blast_Score=205, Evalue=4e-54, Organism=Escherichia coli, GI1788930, Length=338, Percent_Identity=32.2485207100592, Blast_Score=187, Evalue=9e-49, Organism=Caenorhabditis elegans, GI71995724, Length=366, Percent_Identity=30.327868852459, Blast_Score=230, Evalue=1e-60, Organism=Caenorhabditis elegans, GI17507121, Length=366, Percent_Identity=30.0546448087432, Blast_Score=229, Evalue=2e-60, Organism=Caenorhabditis elegans, GI71987143, Length=366, Percent_Identity=30.0546448087432, Blast_Score=224, Evalue=8e-59, Organism=Caenorhabditis elegans, GI17552114, Length=363, Percent_Identity=30.8539944903581, Blast_Score=211, Evalue=5e-55, Organism=Caenorhabditis elegans, GI17555296, Length=406, Percent_Identity=29.8029556650246, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI17510307, Length=372, Percent_Identity=30.1075268817204, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI71995514, Length=372, Percent_Identity=30.1075268817204, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI17510309, Length=372, Percent_Identity=30.1075268817204, Blast_Score=202, Evalue=4e-52, Organism=Caenorhabditis elegans, GI86570094, Length=357, Percent_Identity=32.4929971988796, Blast_Score=198, Evalue=5e-51, Organism=Caenorhabditis elegans, GI32565321, Length=385, Percent_Identity=28.8311688311688, Blast_Score=193, Evalue=1e-49, Organism=Caenorhabditis elegans, GI71982858, Length=371, Percent_Identity=29.1105121293801, Blast_Score=190, Evalue=1e-48, Organism=Caenorhabditis elegans, GI17537549, Length=369, Percent_Identity=30.6233062330623, Blast_Score=189, Evalue=2e-48, Organism=Caenorhabditis elegans, GI115532546, Length=389, Percent_Identity=29.0488431876607, Blast_Score=189, Evalue=2e-48, Organism=Caenorhabditis elegans, GI115532548, Length=389, Percent_Identity=29.0488431876607, Blast_Score=188, Evalue=5e-48, Organism=Caenorhabditis elegans, GI17510559, Length=387, Percent_Identity=28.1653746770026, Blast_Score=186, Evalue=1e-47, Organism=Caenorhabditis elegans, GI17509811, Length=382, Percent_Identity=28.2722513089005, Blast_Score=186, Evalue=2e-47, Organism=Caenorhabditis elegans, GI71995718, Length=375, Percent_Identity=28.8, Blast_Score=184, Evalue=7e-47, Organism=Caenorhabditis elegans, GI115533224, Length=332, Percent_Identity=31.3253012048193, Blast_Score=183, Evalue=2e-46, Organism=Caenorhabditis elegans, GI71999646, Length=354, Percent_Identity=27.9661016949153, Blast_Score=179, Evalue=2e-45, Organism=Caenorhabditis elegans, GI71999644, Length=354, Percent_Identity=27.9661016949153, Blast_Score=179, Evalue=3e-45, Organism=Caenorhabditis elegans, GI193206561, Length=354, Percent_Identity=28.5310734463277, Blast_Score=178, Evalue=4e-45, Organism=Caenorhabditis elegans, GI17507945, Length=364, Percent_Identity=27.4725274725275, Blast_Score=171, Evalue=6e-43, Organism=Caenorhabditis elegans, GI17552642, Length=359, Percent_Identity=29.5264623955432, Blast_Score=170, Evalue=1e-42, Organism=Caenorhabditis elegans, GI17507881, Length=372, Percent_Identity=29.0322580645161, Blast_Score=170, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17507877, Length=373, Percent_Identity=28.686327077748, Blast_Score=167, Evalue=7e-42, Organism=Caenorhabditis elegans, GI193208216, Length=379, Percent_Identity=29.5514511873351, Blast_Score=165, Evalue=4e-41, Organism=Caenorhabditis elegans, GI17505370, Length=368, Percent_Identity=29.8913043478261, Blast_Score=163, Evalue=2e-40, Organism=Caenorhabditis elegans, GI17553716, Length=362, Percent_Identity=27.6243093922652, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17536099, Length=396, Percent_Identity=28.2828282828283, Blast_Score=158, Evalue=4e-39, Organism=Caenorhabditis elegans, GI17536101, Length=396, Percent_Identity=28.2828282828283, Blast_Score=158, Evalue=5e-39, Organism=Caenorhabditis elegans, GI17508543, Length=375, Percent_Identity=28.2666666666667, Blast_Score=158, Evalue=6e-39, Organism=Caenorhabditis elegans, GI17507879, Length=374, Percent_Identity=29.4117647058824, Blast_Score=156, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17536103, Length=393, Percent_Identity=27.9898218829517, Blast_Score=156, Evalue=2e-38, Organism=Caenorhabditis elegans, GI71990816, Length=379, Percent_Identity=28.2321899736148, Blast_Score=155, Evalue=3e-38, Organism=Caenorhabditis elegans, GI25148203, Length=417, Percent_Identity=25.8992805755396, Blast_Score=137, Evalue=7e-33, Organism=Caenorhabditis elegans, GI17556951, Length=374, Percent_Identity=24.5989304812834, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI17507641, Length=401, Percent_Identity=25.1870324189526, Blast_Score=136, Evalue=3e-32, Organism=Caenorhabditis elegans, GI32564046, Length=388, Percent_Identity=26.0309278350515, Blast_Score=135, Evalue=6e-32, Organism=Caenorhabditis elegans, GI71982862, Length=203, Percent_Identity=31.5270935960591, Blast_Score=123, Evalue=2e-28, Organism=Caenorhabditis elegans, GI71997889, Length=440, Percent_Identity=25.2272727272727, Blast_Score=122, Evalue=3e-28, Organism=Caenorhabditis elegans, GI25148291, Length=368, Percent_Identity=25.2717391304348, Blast_Score=122, Evalue=4e-28, Organism=Caenorhabditis elegans, GI25148205, Length=341, Percent_Identity=25.2199413489736, Blast_Score=98, Evalue=1e-20, Organism=Caenorhabditis elegans, GI71987152, Length=96, Percent_Identity=36.4583333333333, Blast_Score=84, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6320224, Length=370, Percent_Identity=31.0810810810811, Blast_Score=222, Evalue=9e-59, Organism=Saccharomyces cerevisiae, GI6321856, Length=363, Percent_Identity=35.8126721763085, Blast_Score=217, Evalue=3e-57, Organism=Saccharomyces cerevisiae, GI6324778, Length=423, Percent_Identity=29.0780141843972, Blast_Score=213, Evalue=6e-56, Organism=Saccharomyces cerevisiae, GI6320041, Length=369, Percent_Identity=31.1653116531165, Blast_Score=211, Evalue=1e-55, Organism=Saccharomyces cerevisiae, GI6322912, Length=365, Percent_Identity=32.3287671232877, Blast_Score=201, Evalue=2e-52, Organism=Saccharomyces cerevisiae, GI6322323, Length=365, Percent_Identity=32.3287671232877, Blast_Score=201, Evalue=2e-52, Organism=Saccharomyces cerevisiae, GI6324217, Length=360, Percent_Identity=29.1666666666667, Blast_Score=196, Evalue=4e-51, Organism=Saccharomyces cerevisiae, GI6325138, Length=371, Percent_Identity=28.0323450134771, Blast_Score=194, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6321360, Length=363, Percent_Identity=31.404958677686, Blast_Score=191, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6324620, Length=376, Percent_Identity=31.1170212765957, Blast_Score=190, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6320119, Length=374, Percent_Identity=30.2139037433155, Blast_Score=186, Evalue=8e-48, Organism=Saccharomyces cerevisiae, GI6320173, Length=405, Percent_Identity=27.9012345679012, Blast_Score=185, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6321111, Length=384, Percent_Identity=27.8645833333333, Blast_Score=185, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6321963, Length=430, Percent_Identity=28.8372093023256, Blast_Score=181, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6322427, Length=363, Percent_Identity=28.9256198347107, Blast_Score=180, Evalue=4e-46, Organism=Saccharomyces cerevisiae, GI6323021, Length=367, Percent_Identity=28.6103542234332, Blast_Score=178, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6320449, Length=383, Percent_Identity=30.0261096605744, Blast_Score=174, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6323947, Length=365, Percent_Identity=28.7671232876712, Blast_Score=172, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6319714, Length=363, Percent_Identity=29.2011019283747, Blast_Score=164, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6319618, Length=417, Percent_Identity=28.537170263789, Blast_Score=158, Evalue=1e-39, Organism=Saccharomyces cerevisiae, GI6321267, Length=365, Percent_Identity=31.5068493150685, Blast_Score=154, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6323306, Length=416, Percent_Identity=26.2019230769231, Blast_Score=147, Evalue=4e-36, Organism=Saccharomyces cerevisiae, GI6320400, Length=384, Percent_Identity=28.125, Blast_Score=141, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6322876, Length=456, Percent_Identity=26.0964912280702, Blast_Score=127, Evalue=5e-30, Organism=Saccharomyces cerevisiae, GI6324366, Length=371, Percent_Identity=28.3018867924528, Blast_Score=108, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6321374, Length=391, Percent_Identity=24.0409207161125, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI24645031, Length=375, Percent_Identity=29.6, Blast_Score=219, Evalue=2e-57, Organism=Drosophila melanogaster, GI24582080, Length=367, Percent_Identity=32.1525885558583, Blast_Score=217, Evalue=1e-56, Organism=Drosophila melanogaster, GI24582078, Length=367, Percent_Identity=32.1525885558583, Blast_Score=217, Evalue=1e-56, Organism=Drosophila melanogaster, GI17136248, Length=367, Percent_Identity=32.1525885558583, Blast_Score=217, Evalue=1e-56, Organism=Drosophila melanogaster, GI24582075, Length=367, Percent_Identity=32.1525885558583, Blast_Score=217, Evalue=1e-56, Organism=Drosophila melanogaster, GI24583279, Length=409, Percent_Identity=30.0733496332518, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI24583281, Length=409, Percent_Identity=30.0733496332518, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI24585582, Length=361, Percent_Identity=32.1329639889197, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI17136814, Length=381, Percent_Identity=32.5459317585302, Blast_Score=207, Evalue=2e-53, Organism=Drosophila melanogaster, GI21356161, Length=361, Percent_Identity=32.1329639889197, Blast_Score=205, Evalue=4e-53, Organism=Drosophila melanogaster, GI21355075, Length=357, Percent_Identity=32.4929971988796, Blast_Score=204, Evalue=6e-53, Organism=Drosophila melanogaster, GI24642151, Length=358, Percent_Identity=31.8435754189944, Blast_Score=204, Evalue=8e-53, Organism=Drosophila melanogaster, GI28574962, Length=342, Percent_Identity=31.8713450292398, Blast_Score=202, Evalue=4e-52, Organism=Drosophila melanogaster, GI24584399, Length=362, Percent_Identity=30.1104972375691, Blast_Score=195, Evalue=4e-50, Organism=Drosophila melanogaster, GI28575014, Length=357, Percent_Identity=29.1316526610644, Blast_Score=194, Evalue=8e-50, Organism=Drosophila melanogaster, GI24644479, Length=381, Percent_Identity=27.2965879265092, Blast_Score=191, Evalue=8e-49, Organism=Drosophila melanogaster, GI18857967, Length=359, Percent_Identity=28.133704735376, Blast_Score=191, Evalue=8e-49, Organism=Drosophila melanogaster, GI24644483, Length=381, Percent_Identity=27.2965879265092, Blast_Score=191, Evalue=8e-49, Organism=Drosophila melanogaster, GI281361218, Length=381, Percent_Identity=27.2965879265092, Blast_Score=191, Evalue=8e-49, Organism=Drosophila melanogaster, GI24644481, Length=381, Percent_Identity=27.2965879265092, Blast_Score=191, Evalue=8e-49, Organism=Drosophila melanogaster, GI24644487, Length=381, Percent_Identity=27.2965879265092, Blast_Score=191, Evalue=9e-49, Organism=Drosophila melanogaster, GI45551833, Length=381, Percent_Identity=27.2965879265092, Blast_Score=191, Evalue=9e-49, Organism=Drosophila melanogaster, GI24644485, Length=381, Percent_Identity=27.2965879265092, Blast_Score=191, Evalue=9e-49, Organism=Drosophila melanogaster, GI24662330, Length=358, Percent_Identity=28.4916201117318, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI24581954, Length=372, Percent_Identity=29.3010752688172, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI24581952, Length=372, Percent_Identity=29.3010752688172, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI24581956, Length=372, Percent_Identity=29.3010752688172, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI24584994, Length=387, Percent_Identity=28.1653746770026, Blast_Score=186, Evalue=2e-47, Organism=Drosophila melanogaster, GI17985987, Length=378, Percent_Identity=28.3068783068783, Blast_Score=184, Evalue=8e-47, Organism=Drosophila melanogaster, GI17647335, Length=359, Percent_Identity=30.6406685236769, Blast_Score=184, Evalue=1e-46, Organism=Drosophila melanogaster, GI17977678, Length=356, Percent_Identity=26.685393258427, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI24666101, Length=366, Percent_Identity=29.2349726775956, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI21355559, Length=374, Percent_Identity=29.144385026738, Blast_Score=162, Evalue=5e-40, Organism=Drosophila melanogaster, GI24642822, Length=404, Percent_Identity=28.2178217821782, Blast_Score=162, Evalue=6e-40, Organism=Drosophila melanogaster, GI281365720, Length=301, Percent_Identity=29.9003322259136, Blast_Score=156, Evalue=3e-38, Organism=Drosophila melanogaster, GI28571808, Length=351, Percent_Identity=27.9202279202279, Blast_Score=155, Evalue=6e-38, Organism=Drosophila melanogaster, GI28571809, Length=351, Percent_Identity=27.9202279202279, Blast_Score=155, Evalue=6e-38, Organism=Drosophila melanogaster, GI24643725, Length=381, Percent_Identity=27.0341207349081, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI18859659, Length=454, Percent_Identity=24.6696035242291, Blast_Score=139, Evalue=2e-33, Organism=Drosophila melanogaster, GI28571338, Length=454, Percent_Identity=24.6696035242291, Blast_Score=139, Evalue=3e-33, Organism=Drosophila melanogaster, GI24668515, Length=359, Percent_Identity=26.7409470752089, Blast_Score=131, Evalue=7e-31, Organism=Drosophila melanogaster, GI17136666, Length=463, Percent_Identity=26.133909287257, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI24640164, Length=360, Percent_Identity=23.8888888888889, Blast_Score=122, Evalue=7e-28, Organism=Drosophila melanogaster, GI19920478, Length=360, Percent_Identity=26.9444444444444, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI20130173, Length=326, Percent_Identity=26.9938650306748, Blast_Score=109, Evalue=3e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 47841; Mature: 47841
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNSFDTLNLNPKLVQGLKKLNINIPTEIQAEAIPLAMENKDIIGQSETGTGKTLAYLLP CCCCCCEECCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHH IFEKITTEKREMQAIILAPTHELAMQINNEIKNISSNSNMDVKSMAIIGEANIKRQIEKL HHHHHHCCHHHEEEEEEECHHHHHHHHHHHHHCCCCCCCCCEEHEEEECCHHHHHHHHHH KEKPHIIVGSPGRILELIKKKKITAHTVKTIVIDEGDKLLDKNNLKVVKEVIKTTLRERQ HCCCEEEECCCHHHHHHHHHCCCEEEEEEEEEEECCCHHHCCCCHHHHHHHHHHHHHHCE LMLFSATITESTLNIAKDLMKDSVIVKVKEKNTVNENIKHLYITGEHRERIEILRKLIAA EEEEEEHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHC TNPKRAIVFINRNEEIELTTLKLQYHKIKAYGIYGAAEKEQRKKALEDFRSGKVQILVSS CCCCEEEEEEECCCEEEEEEEEEEEEEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEC DLSARGLDVKDVTHIFNLDLPENPKEYLHRVGRTGRASKEGIAISIITEKEKALIRKYEK CCCCCCCCHHHHHHHEECCCCCCHHHHHHHCCCCCCCCCCCEEEEEEECHHHHHHHHHHH EFNINIEEKKIYKGTLISSKGERSSQPKSKNKSTSAHKDNNKKKRSSSINKSKNNHKKKK HHCCCEEHHEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCC Y C >Mature Secondary Structure MNNSFDTLNLNPKLVQGLKKLNINIPTEIQAEAIPLAMENKDIIGQSETGTGKTLAYLLP CCCCCCEECCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHH IFEKITTEKREMQAIILAPTHELAMQINNEIKNISSNSNMDVKSMAIIGEANIKRQIEKL HHHHHHCCHHHEEEEEEECHHHHHHHHHHHHHCCCCCCCCCEEHEEEECCHHHHHHHHHH KEKPHIIVGSPGRILELIKKKKITAHTVKTIVIDEGDKLLDKNNLKVVKEVIKTTLRERQ HCCCEEEECCCHHHHHHHHHCCCEEEEEEEEEEECCCHHHCCCCHHHHHHHHHHHHHHCE LMLFSATITESTLNIAKDLMKDSVIVKVKEKNTVNENIKHLYITGEHRERIEILRKLIAA EEEEEEHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHC TNPKRAIVFINRNEEIELTTLKLQYHKIKAYGIYGAAEKEQRKKALEDFRSGKVQILVSS CCCCEEEEEEECCCEEEEEEEEEEEEEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEC DLSARGLDVKDVTHIFNLDLPENPKEYLHRVGRTGRASKEGIAISIITEKEKALIRKYEK CCCCCCCCHHHHHHHEECCCCCCHHHHHHHCCCCCCCCCCCEEEEEEECHHHHHHHHHHH EFNINIEEKKIYKGTLISSKGERSSQPKSKNKSTSAHKDNNKKKRSSSINKSKNNHKKKK HHCCCEEHHEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCC Y C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]