| Definition | Clostridium botulinum A str. Hall, complete genome. |
|---|---|
| Accession | NC_009698 |
| Length | 3,760,560 |
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The map label for this gene is deaD [H]
Identifier: 153936334
GI number: 153936334
Start: 1819663
End: 1821108
Strand: Direct
Name: deaD [H]
Synonym: CLC_1723
Alternate gene names: 153936334
Gene position: 1819663-1821108 (Clockwise)
Preceding gene: 153935537
Following gene: 153937080
Centisome position: 48.39
GC content: 29.53
Gene sequence:
>1446_bases ATGAATAAATTAACTTTTGAAAATTATAAATTAAGTGATGAAATATTAAAATCCCTGGGAAAACTAGGGTATAAAAATCC CTCTGAGGTGCAAAAACAAGTTATACCACTAATATTAAAGGATAAGGATATTATAGTAAAATCTGAAACCGGTAGCGGTA AAACGGCAGCCTTTTCAATACCTATTTGTGAAAAATTAGAGCTAGAAGAAAAAGATCCTCAAGTATTAGTGCTTACCCCT ACTAGGGAATTAGCTCTTCAAATCAAAGAGGAGATATCAAGCATAGCTTTATATAAAAGATTAAGATGTACAGCGATTTT TGGTAAGCAGCCTATGAGCCTTCAGAAGAGGGAATTAAAGCAAAGAGTACATTTAGTTGTAGGTACTCCAGGTAGAACTT TAGATCATATAGAAAGAGAAAATTTAAATTTAAAAAAGATAAAGTATTTTGTTTTAGATGAAGCAGATGAAATGCTTAAT ATGGGATTTATAGATCAAGTAGAAGCTGTTATAAAAAGATTACCTAAAAATAGAGTAACTATGTTGTTTTCAGCTACTAT ACCAGAAAAAGTAGAGAATTTATGTAAAAAGTACATGAACAATCCAGAAAATATAAACATAAATCCAGAAAATATAACTA CAGGTACCATAAATCAATGTTATTATGAAGTTGAAGATAAAGATAAGTTTTATCTTTTGCAAAAGATAATATATAAAGAG GTAGTAGATAATTCTATTATATTCTGTAATACAAGGGAAAAGGTAGATGAAGTATTAAAACATATGAAGAAAAAAGGGCT TAACGCTATTGGTCTGCATGGTGGTATGGAACAAAAAGATAGATTAGAGACTATGAAAAAGTTCAAAGAAGGTGAATTTC AGTTCTTAGTATGTACAGATGTAGCAGCTAGAGGCATTCATATAGAAAATATAAGCCATGTTATAAATTATGAGATGCCT TATGAAAAAGAAAGTTATGTTCATAGAATAGGGAGAACAGGAAGAGCAGGAAAAGAAGGGGTAGCTATAACCTTTATAGA ACCTAATAAAGTTAGATTTTTAAAAGATATAGAAGATTATATAGAGAAGGAAATACCTAAAAGGAAGGAGCCTTCTTCGG AAGAAGTAGCTAAGGGTAAAAAAATATTCGAAGAGAATATTAAAAATAGGATTAAAACAAAAGTACCAAAAGATAATAAA AAGCAAAAGGATATTACTAAAATATATATAAGTGCAGGAAGAAAGAAAAAAATTAGGCCAGGAGATATTGTAGGTGCTAT TACTAGTATAGAAGGCATTAATGTAGATAATATAGGTATAATAGATATACAGGATAATCACTCCTATGTAGATATACTGG AAAGGAAAGGAGATATAGTACTTAAAGCCAGTGAAGATATGAAAATAAAAGGGAAGAAAGTAAGAATACAAAGGGCAGTA AAATAA
Upstream 100 bases:
>100_bases TTTAGAATTATGGAATTTGTGTAAAGATTTTTATTTAATTTAAATGTAAATATATTAACAATAATAAAGAATTATATAAA ATAAAAATGAGGTTGAGTTT
Downstream 100 bases:
>100_bases ATATAAAAATTATTCTACTTATTGATTAAATAATACAAATCATAATAATTTATTCTATTTATATAATATTTGAGTATTAT ATAAATAGATTTATTAAGAA
Product: ATP-dependent RNA helicase DeaD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 481; Mature: 481
Protein sequence:
>481_residues MNKLTFENYKLSDEILKSLGKLGYKNPSEVQKQVIPLILKDKDIIVKSETGSGKTAAFSIPICEKLELEEKDPQVLVLTP TRELALQIKEEISSIALYKRLRCTAIFGKQPMSLQKRELKQRVHLVVGTPGRTLDHIERENLNLKKIKYFVLDEADEMLN MGFIDQVEAVIKRLPKNRVTMLFSATIPEKVENLCKKYMNNPENININPENITTGTINQCYYEVEDKDKFYLLQKIIYKE VVDNSIIFCNTREKVDEVLKHMKKKGLNAIGLHGGMEQKDRLETMKKFKEGEFQFLVCTDVAARGIHIENISHVINYEMP YEKESYVHRIGRTGRAGKEGVAITFIEPNKVRFLKDIEDYIEKEIPKRKEPSSEEVAKGKKIFEENIKNRIKTKVPKDNK KQKDITKIYISAGRKKKIRPGDIVGAITSIEGINVDNIGIIDIQDNHSYVDILERKGDIVLKASEDMKIKGKKVRIQRAV K
Sequences:
>Translated_481_residues MNKLTFENYKLSDEILKSLGKLGYKNPSEVQKQVIPLILKDKDIIVKSETGSGKTAAFSIPICEKLELEEKDPQVLVLTP TRELALQIKEEISSIALYKRLRCTAIFGKQPMSLQKRELKQRVHLVVGTPGRTLDHIERENLNLKKIKYFVLDEADEMLN MGFIDQVEAVIKRLPKNRVTMLFSATIPEKVENLCKKYMNNPENININPENITTGTINQCYYEVEDKDKFYLLQKIIYKE VVDNSIIFCNTREKVDEVLKHMKKKGLNAIGLHGGMEQKDRLETMKKFKEGEFQFLVCTDVAARGIHIENISHVINYEMP YEKESYVHRIGRTGRAGKEGVAITFIEPNKVRFLKDIEDYIEKEIPKRKEPSSEEVAKGKKIFEENIKNRIKTKVPKDNK KQKDITKIYISAGRKKKIRPGDIVGAITSIEGINVDNIGIIDIQDNHSYVDILERKGDIVLKASEDMKIKGKKVRIQRAV K >Mature_481_residues MNKLTFENYKLSDEILKSLGKLGYKNPSEVQKQVIPLILKDKDIIVKSETGSGKTAAFSIPICEKLELEEKDPQVLVLTP TRELALQIKEEISSIALYKRLRCTAIFGKQPMSLQKRELKQRVHLVVGTPGRTLDHIERENLNLKKIKYFVLDEADEMLN MGFIDQVEAVIKRLPKNRVTMLFSATIPEKVENLCKKYMNNPENININPENITTGTINQCYYEVEDKDKFYLLQKIIYKE VVDNSIIFCNTREKVDEVLKHMKKKGLNAIGLHGGMEQKDRLETMKKFKEGEFQFLVCTDVAARGIHIENISHVINYEMP YEKESYVHRIGRTGRAGKEGVAITFIEPNKVRFLKDIEDYIEKEIPKRKEPSSEEVAKGKKIFEENIKNRIKTKVPKDNK KQKDITKIYISAGRKKKIRPGDIVGAITSIEGINVDNIGIIDIQDNHSYVDILERKGDIVLKASEDMKIKGKKVRIQRAV K
Specific function: Has a helix-destabilizing activity. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. May function in rRNA maturation and ribosome biogenesis [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI7661920, Length=362, Percent_Identity=38.3977900552486, Blast_Score=287, Evalue=1e-77, Organism=Homo sapiens, GI20149629, Length=363, Percent_Identity=36.9146005509642, Blast_Score=259, Evalue=5e-69, Organism=Homo sapiens, GI4503529, Length=363, Percent_Identity=38.5674931129477, Blast_Score=249, Evalue=5e-66, Organism=Homo sapiens, GI83700235, Length=357, Percent_Identity=39.7759103641457, Blast_Score=248, Evalue=7e-66, Organism=Homo sapiens, GI4758138, Length=364, Percent_Identity=34.3406593406593, Blast_Score=241, Evalue=7e-64, Organism=Homo sapiens, GI169881239, Length=391, Percent_Identity=35.0383631713555, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI13514809, Length=391, Percent_Identity=35.0383631713555, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI164664518, Length=363, Percent_Identity=35.2617079889807, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI301171475, Length=392, Percent_Identity=34.4387755102041, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI87196351, Length=392, Percent_Identity=34.4387755102041, Blast_Score=240, Evalue=3e-63, Organism=Homo sapiens, GI301171467, Length=392, Percent_Identity=34.4387755102041, Blast_Score=240, Evalue=3e-63, Organism=Homo sapiens, GI41327771, Length=377, Percent_Identity=36.3395225464191, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI41327773, Length=357, Percent_Identity=38.0952380952381, Blast_Score=235, Evalue=7e-62, Organism=Homo sapiens, GI188035877, Length=361, Percent_Identity=36.2880886426593, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI148613856, Length=364, Percent_Identity=33.5164835164835, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI38201710, Length=364, Percent_Identity=33.5164835164835, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI21071032, Length=362, Percent_Identity=35.3591160220994, Blast_Score=231, Evalue=2e-60, Organism=Homo sapiens, GI50659095, Length=359, Percent_Identity=38.4401114206128, Blast_Score=229, Evalue=6e-60, Organism=Homo sapiens, GI224593278, Length=361, Percent_Identity=33.2409972299169, Blast_Score=229, Evalue=6e-60, Organism=Homo sapiens, GI45446747, Length=367, Percent_Identity=34.3324250681199, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI45446743, Length=367, Percent_Identity=34.3324250681199, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI31542656, Length=368, Percent_Identity=36.6847826086957, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI222352149, Length=369, Percent_Identity=33.3333333333333, Blast_Score=225, Evalue=6e-59, Organism=Homo sapiens, GI13129006, Length=398, Percent_Identity=34.4221105527638, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI262118318, Length=360, Percent_Identity=35, Blast_Score=223, Evalue=4e-58, Organism=Homo sapiens, GI216548263, Length=360, Percent_Identity=35, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI262231852, Length=360, Percent_Identity=35, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI13518015, Length=360, Percent_Identity=35, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI4758112, Length=380, Percent_Identity=33.1578947368421, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI18375623, Length=380, Percent_Identity=33.1578947368421, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI21040371, Length=382, Percent_Identity=32.7225130890052, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI41327776, Length=363, Percent_Identity=33.6088154269972, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI256223453, Length=350, Percent_Identity=34.8571428571429, Blast_Score=215, Evalue=8e-56, Organism=Homo sapiens, GI8922886, Length=390, Percent_Identity=33.8461538461538, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI6005743, Length=390, Percent_Identity=34.3589743589744, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI164419743, Length=376, Percent_Identity=30.5851063829787, Blast_Score=212, Evalue=6e-55, Organism=Homo sapiens, GI51094101, Length=376, Percent_Identity=30.5851063829787, Blast_Score=212, Evalue=6e-55, Organism=Homo sapiens, GI55749865, Length=352, Percent_Identity=33.2386363636364, Blast_Score=210, Evalue=3e-54, Organism=Homo sapiens, GI62241022, Length=373, Percent_Identity=34.8525469168901, Blast_Score=206, Evalue=5e-53, Organism=Homo sapiens, GI13514831, Length=376, Percent_Identity=31.6489361702128, Blast_Score=196, Evalue=4e-50, Organism=Homo sapiens, GI62241024, Length=351, Percent_Identity=35.042735042735, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI164419732, Length=374, Percent_Identity=31.8181818181818, Blast_Score=189, Evalue=4e-48, Organism=Homo sapiens, GI41327779, Length=360, Percent_Identity=34.1666666666667, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI38569503, Length=367, Percent_Identity=29.9727520435967, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI38569505, Length=367, Percent_Identity=29.9727520435967, Blast_Score=186, Evalue=5e-47, Organism=Homo sapiens, GI38327634, Length=354, Percent_Identity=31.3559322033898, Blast_Score=182, Evalue=5e-46, Organism=Homo sapiens, GI9506931, Length=401, Percent_Identity=28.428927680798, Blast_Score=180, Evalue=2e-45, Organism=Homo sapiens, GI17505907, Length=397, Percent_Identity=27.9596977329975, Blast_Score=172, Evalue=5e-43, Organism=Homo sapiens, GI9966805, Length=325, Percent_Identity=32, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI4826686, Length=337, Percent_Identity=29.9703264094956, Blast_Score=142, Evalue=9e-34, Organism=Homo sapiens, GI256773275, Length=404, Percent_Identity=25.4950495049505, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI154759257, Length=445, Percent_Identity=25.6179775280899, Blast_Score=127, Evalue=3e-29, Organism=Homo sapiens, GI20336298, Length=336, Percent_Identity=27.3809523809524, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI4557365, Length=362, Percent_Identity=24.3093922651934, Blast_Score=70, Evalue=4e-12, Organism=Escherichia coli, GI87082221, Length=375, Percent_Identity=42.4, Blast_Score=328, Evalue=7e-91, Organism=Escherichia coli, GI1787605, Length=463, Percent_Identity=34.5572354211663, Blast_Score=315, Evalue=5e-87, Organism=Escherichia coli, GI1787016, Length=377, Percent_Identity=36.3395225464191, Blast_Score=278, Evalue=5e-76, Organism=Escherichia coli, GI1790214, Length=373, Percent_Identity=36.1930294906166, Blast_Score=251, Evalue=5e-68, Organism=Escherichia coli, GI1788930, Length=396, Percent_Identity=33.8383838383838, Blast_Score=232, Evalue=4e-62, Organism=Escherichia coli, GI48994977, Length=353, Percent_Identity=23.5127478753541, Blast_Score=88, Evalue=1e-18, Organism=Caenorhabditis elegans, GI71995724, Length=362, Percent_Identity=40.0552486187845, Blast_Score=301, Evalue=6e-82, Organism=Caenorhabditis elegans, GI17507121, Length=362, Percent_Identity=39.7790055248619, Blast_Score=300, Evalue=8e-82, Organism=Caenorhabditis elegans, GI71987143, Length=371, Percent_Identity=38.8140161725067, Blast_Score=288, Evalue=3e-78, Organism=Caenorhabditis elegans, GI17555296, Length=398, Percent_Identity=35.929648241206, Blast_Score=267, Evalue=1e-71, Organism=Caenorhabditis elegans, GI86570094, Length=356, Percent_Identity=37.0786516853933, Blast_Score=237, Evalue=1e-62, Organism=Caenorhabditis elegans, GI32565321, Length=386, Percent_Identity=34.7150259067358, Blast_Score=236, Evalue=1e-62, Organism=Caenorhabditis elegans, GI17552114, Length=369, Percent_Identity=35.230352303523, Blast_Score=236, Evalue=1e-62, Organism=Caenorhabditis elegans, GI115533224, Length=344, Percent_Identity=36.6279069767442, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI17509811, Length=358, Percent_Identity=33.7988826815642, Blast_Score=222, Evalue=4e-58, Organism=Caenorhabditis elegans, GI71999646, Length=363, Percent_Identity=31.404958677686, Blast_Score=221, Evalue=5e-58, Organism=Caenorhabditis elegans, GI17510559, Length=385, Percent_Identity=32.7272727272727, Blast_Score=221, Evalue=9e-58, Organism=Caenorhabditis elegans, GI71999644, Length=363, Percent_Identity=31.404958677686, Blast_Score=220, Evalue=1e-57, Organism=Caenorhabditis elegans, GI17510307, Length=387, Percent_Identity=33.5917312661499, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17510309, Length=387, Percent_Identity=33.5917312661499, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI71995514, Length=387, Percent_Identity=33.5917312661499, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI71982858, Length=376, Percent_Identity=31.6489361702128, Blast_Score=218, Evalue=6e-57, Organism=Caenorhabditis elegans, GI115532546, Length=376, Percent_Identity=33.7765957446808, Blast_Score=218, Evalue=8e-57, Organism=Caenorhabditis elegans, GI115532548, Length=376, Percent_Identity=33.7765957446808, Blast_Score=217, Evalue=1e-56, Organism=Caenorhabditis elegans, GI17537549, Length=372, Percent_Identity=35.752688172043, Blast_Score=215, Evalue=5e-56, Organism=Caenorhabditis elegans, GI17507945, Length=382, Percent_Identity=33.5078534031414, Blast_Score=214, Evalue=6e-56, Organism=Caenorhabditis elegans, GI71995718, Length=403, Percent_Identity=30.272952853598, Blast_Score=205, Evalue=3e-53, Organism=Caenorhabditis elegans, GI17507881, Length=396, Percent_Identity=34.0909090909091, Blast_Score=203, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17507877, Length=432, Percent_Identity=30.5555555555556, Blast_Score=202, Evalue=5e-52, Organism=Caenorhabditis elegans, GI193206561, Length=349, Percent_Identity=31.5186246418338, Blast_Score=199, Evalue=4e-51, Organism=Caenorhabditis elegans, GI17507879, Length=396, Percent_Identity=32.5757575757576, Blast_Score=196, Evalue=3e-50, Organism=Caenorhabditis elegans, GI17552642, Length=375, Percent_Identity=31.2, Blast_Score=193, Evalue=1e-49, Organism=Caenorhabditis elegans, GI17536099, Length=397, Percent_Identity=31.7380352644836, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI17536101, Length=397, Percent_Identity=31.7380352644836, Blast_Score=191, Evalue=6e-49, Organism=Caenorhabditis elegans, GI17553716, Length=362, Percent_Identity=31.767955801105, Blast_Score=189, Evalue=2e-48, Organism=Caenorhabditis elegans, GI17536103, Length=396, Percent_Identity=31.8181818181818, Blast_Score=188, Evalue=7e-48, Organism=Caenorhabditis elegans, GI17505370, Length=429, Percent_Identity=30.5361305361305, Blast_Score=184, Evalue=8e-47, Organism=Caenorhabditis elegans, GI17507641, Length=398, Percent_Identity=29.6482412060301, Blast_Score=174, Evalue=1e-43, Organism=Caenorhabditis elegans, GI17508543, Length=381, Percent_Identity=28.0839895013123, Blast_Score=169, Evalue=2e-42, Organism=Caenorhabditis elegans, GI25148203, Length=423, Percent_Identity=27.4231678486998, Blast_Score=169, Evalue=3e-42, Organism=Caenorhabditis elegans, GI32564046, Length=383, Percent_Identity=29.5039164490862, Blast_Score=163, Evalue=2e-40, Organism=Caenorhabditis elegans, GI71990816, Length=375, Percent_Identity=30.1333333333333, Blast_Score=151, Evalue=6e-37, Organism=Caenorhabditis elegans, GI193208216, Length=382, Percent_Identity=28.0104712041885, Blast_Score=149, Evalue=4e-36, Organism=Caenorhabditis elegans, GI17556951, Length=386, Percent_Identity=28.7564766839378, Blast_Score=149, Evalue=4e-36, Organism=Caenorhabditis elegans, GI25148291, Length=338, Percent_Identity=27.5147928994083, Blast_Score=145, Evalue=7e-35, Organism=Caenorhabditis elegans, GI71982862, Length=208, Percent_Identity=35.0961538461538, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI25148205, Length=349, Percent_Identity=24.0687679083095, Blast_Score=112, Evalue=3e-25, Organism=Caenorhabditis elegans, GI71997889, Length=362, Percent_Identity=26.5193370165746, Blast_Score=112, Evalue=4e-25, Organism=Caenorhabditis elegans, GI71987152, Length=99, Percent_Identity=46.4646464646465, Blast_Score=101, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17557982, Length=381, Percent_Identity=23.8845144356955, Blast_Score=95, Evalue=9e-20, Organism=Caenorhabditis elegans, GI17566630, Length=332, Percent_Identity=25, Blast_Score=90, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17552866, Length=390, Percent_Identity=23.3333333333333, Blast_Score=65, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6324217, Length=356, Percent_Identity=37.9213483146067, Blast_Score=257, Evalue=3e-69, Organism=Saccharomyces cerevisiae, GI6320224, Length=361, Percent_Identity=36.8421052631579, Blast_Score=255, Evalue=9e-69, Organism=Saccharomyces cerevisiae, GI6320041, Length=361, Percent_Identity=35.4570637119114, Blast_Score=245, Evalue=1e-65, Organism=Saccharomyces cerevisiae, GI6321856, Length=369, Percent_Identity=35.7723577235772, Blast_Score=243, Evalue=6e-65, Organism=Saccharomyces cerevisiae, GI6322912, Length=361, Percent_Identity=35.7340720221607, Blast_Score=238, Evalue=2e-63, Organism=Saccharomyces cerevisiae, GI6322323, Length=361, Percent_Identity=35.7340720221607, Blast_Score=238, Evalue=2e-63, Organism=Saccharomyces cerevisiae, GI6325138, Length=385, Percent_Identity=35.3246753246753, Blast_Score=237, Evalue=3e-63, Organism=Saccharomyces cerevisiae, GI6323021, Length=356, Percent_Identity=38.7640449438202, Blast_Score=232, Evalue=1e-61, Organism=Saccharomyces cerevisiae, GI6324620, Length=368, Percent_Identity=34.2391304347826, Blast_Score=224, Evalue=3e-59, Organism=Saccharomyces cerevisiae, GI6324778, Length=384, Percent_Identity=31.5104166666667, Blast_Score=223, Evalue=6e-59, Organism=Saccharomyces cerevisiae, GI6321360, Length=353, Percent_Identity=35.6940509915014, Blast_Score=214, Evalue=2e-56, Organism=Saccharomyces cerevisiae, GI6323947, Length=363, Percent_Identity=34.9862258953168, Blast_Score=207, Evalue=4e-54, Organism=Saccharomyces cerevisiae, GI6321963, Length=375, Percent_Identity=33.3333333333333, Blast_Score=203, Evalue=6e-53, Organism=Saccharomyces cerevisiae, GI6322427, Length=366, Percent_Identity=32.2404371584699, Blast_Score=203, Evalue=6e-53, Organism=Saccharomyces cerevisiae, GI6320119, Length=347, Percent_Identity=32.2766570605187, Blast_Score=202, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6320449, Length=398, Percent_Identity=31.1557788944724, Blast_Score=189, Evalue=9e-49, Organism=Saccharomyces cerevisiae, GI6321111, Length=364, Percent_Identity=31.5934065934066, Blast_Score=185, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6320400, Length=407, Percent_Identity=33.4152334152334, Blast_Score=185, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6319618, Length=420, Percent_Identity=30.952380952381, Blast_Score=183, Evalue=5e-47, Organism=Saccharomyces cerevisiae, GI6319714, Length=357, Percent_Identity=30.812324929972, Blast_Score=180, Evalue=4e-46, Organism=Saccharomyces cerevisiae, GI6323306, Length=415, Percent_Identity=29.3975903614458, Blast_Score=169, Evalue=7e-43, Organism=Saccharomyces cerevisiae, GI6320173, Length=242, Percent_Identity=33.4710743801653, Blast_Score=147, Evalue=3e-36, Organism=Saccharomyces cerevisiae, GI6321267, Length=429, Percent_Identity=28.9044289044289, Blast_Score=145, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6324366, Length=350, Percent_Identity=26.5714285714286, Blast_Score=113, Evalue=8e-26, Organism=Saccharomyces cerevisiae, GI6321374, Length=407, Percent_Identity=24.8157248157248, Blast_Score=102, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6322876, Length=203, Percent_Identity=32.512315270936, Blast_Score=98, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6323844, Length=370, Percent_Identity=22.4324324324324, Blast_Score=74, Evalue=6e-14, Organism=Drosophila melanogaster, GI24645031, Length=362, Percent_Identity=39.5027624309392, Blast_Score=285, Evalue=4e-77, Organism=Drosophila melanogaster, GI24585582, Length=405, Percent_Identity=36.5432098765432, Blast_Score=263, Evalue=2e-70, Organism=Drosophila melanogaster, GI24582080, Length=361, Percent_Identity=39.612188365651, Blast_Score=259, Evalue=4e-69, Organism=Drosophila melanogaster, GI24582078, Length=361, Percent_Identity=39.612188365651, Blast_Score=259, Evalue=4e-69, Organism=Drosophila melanogaster, GI17136248, Length=361, Percent_Identity=39.612188365651, Blast_Score=259, Evalue=4e-69, Organism=Drosophila melanogaster, GI24582075, Length=361, Percent_Identity=39.612188365651, Blast_Score=259, Evalue=4e-69, Organism=Drosophila melanogaster, GI24584399, Length=355, Percent_Identity=36.9014084507042, Blast_Score=245, Evalue=6e-65, Organism=Drosophila melanogaster, GI24642151, Length=363, Percent_Identity=36.0881542699724, Blast_Score=242, Evalue=5e-64, Organism=Drosophila melanogaster, GI28574962, Length=350, Percent_Identity=36.2857142857143, Blast_Score=241, Evalue=6e-64, Organism=Drosophila melanogaster, GI24584994, Length=378, Percent_Identity=36.2433862433862, Blast_Score=236, Evalue=2e-62, Organism=Drosophila melanogaster, GI24583279, Length=370, Percent_Identity=34.0540540540541, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI24583281, Length=370, Percent_Identity=34.0540540540541, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI24644487, Length=390, Percent_Identity=33.0769230769231, Blast_Score=233, Evalue=3e-61, Organism=Drosophila melanogaster, GI45551833, Length=390, Percent_Identity=33.0769230769231, Blast_Score=233, Evalue=3e-61, Organism=Drosophila melanogaster, GI24644485, Length=390, Percent_Identity=33.0769230769231, Blast_Score=233, Evalue=3e-61, Organism=Drosophila melanogaster, GI24644483, Length=390, Percent_Identity=33.0769230769231, Blast_Score=233, Evalue=3e-61, Organism=Drosophila melanogaster, GI281361218, Length=390, Percent_Identity=33.0769230769231, Blast_Score=233, Evalue=3e-61, Organism=Drosophila melanogaster, GI24644481, Length=390, Percent_Identity=33.0769230769231, Blast_Score=233, Evalue=3e-61, Organism=Drosophila melanogaster, GI24644479, Length=388, Percent_Identity=32.9896907216495, Blast_Score=232, Evalue=4e-61, Organism=Drosophila melanogaster, GI17985987, Length=405, Percent_Identity=34.8148148148148, Blast_Score=231, Evalue=6e-61, Organism=Drosophila melanogaster, GI21355075, Length=376, Percent_Identity=34.5744680851064, Blast_Score=231, Evalue=9e-61, Organism=Drosophila melanogaster, GI18857967, Length=376, Percent_Identity=33.7765957446808, Blast_Score=230, Evalue=2e-60, Organism=Drosophila melanogaster, GI21356161, Length=372, Percent_Identity=34.6774193548387, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI17977678, Length=357, Percent_Identity=34.733893557423, Blast_Score=217, Evalue=2e-56, Organism=Drosophila melanogaster, GI17136814, Length=368, Percent_Identity=34.7826086956522, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI24662330, Length=349, Percent_Identity=34.6704871060172, Blast_Score=212, Evalue=4e-55, Organism=Drosophila melanogaster, GI28575014, Length=364, Percent_Identity=31.5934065934066, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI24581954, Length=383, Percent_Identity=34.2036553524804, Blast_Score=208, Evalue=6e-54, Organism=Drosophila melanogaster, GI24581952, Length=383, Percent_Identity=34.2036553524804, Blast_Score=208, Evalue=6e-54, Organism=Drosophila melanogaster, GI24581956, Length=383, Percent_Identity=34.2036553524804, Blast_Score=208, Evalue=6e-54, Organism=Drosophila melanogaster, GI281365720, Length=310, Percent_Identity=34.8387096774194, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI20130173, Length=435, Percent_Identity=29.4252873563218, Blast_Score=189, Evalue=3e-48, Organism=Drosophila melanogaster, GI17647335, Length=356, Percent_Identity=28.6516853932584, Blast_Score=184, Evalue=2e-46, Organism=Drosophila melanogaster, GI21355559, Length=372, Percent_Identity=34.1397849462366, Blast_Score=182, Evalue=6e-46, Organism=Drosophila melanogaster, GI24666101, Length=360, Percent_Identity=30.8333333333333, Blast_Score=176, Evalue=4e-44, Organism=Drosophila melanogaster, GI28571808, Length=357, Percent_Identity=28.5714285714286, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI28571809, Length=357, Percent_Identity=28.5714285714286, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI18859659, Length=484, Percent_Identity=26.0330578512397, Blast_Score=167, Evalue=2e-41, Organism=Drosophila melanogaster, GI28571338, Length=484, Percent_Identity=26.0330578512397, Blast_Score=167, Evalue=2e-41, Organism=Drosophila melanogaster, GI24643725, Length=396, Percent_Identity=27.020202020202, Blast_Score=161, Evalue=1e-39, Organism=Drosophila melanogaster, GI24642822, Length=375, Percent_Identity=27.2, Blast_Score=156, Evalue=3e-38, Organism=Drosophila melanogaster, GI24668515, Length=335, Percent_Identity=30.1492537313433, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI19920478, Length=358, Percent_Identity=27.3743016759777, Blast_Score=140, Evalue=2e-33, Organism=Drosophila melanogaster, GI17136666, Length=419, Percent_Identity=28.1622911694511, Blast_Score=132, Evalue=5e-31, Organism=Drosophila melanogaster, GI24640164, Length=376, Percent_Identity=22.3404255319149, Blast_Score=106, Evalue=3e-23, Organism=Drosophila melanogaster, GI21358123, Length=369, Percent_Identity=23.5772357723577, Blast_Score=70, Evalue=5e-12, Organism=Drosophila melanogaster, GI24646066, Length=345, Percent_Identity=24.9275362318841, Blast_Score=66, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 55291; Mature: 55291
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLTFENYKLSDEILKSLGKLGYKNPSEVQKQVIPLILKDKDIIVKSETGSGKTAAFSI CCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCEEECCCEEEEEECCCCCCEEEEEC PICEKLELEEKDPQVLVLTPTRELALQIKEEISSIALYKRLRCTAIFGKQPMSLQKRELK CCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHH QRVHLVVGTPGRTLDHIERENLNLKKIKYFVLDEADEMLNMGFIDQVEAVIKRLPKNRVT HHEEEEECCCCCHHHHHHHCCCCHHHEEEEEECCHHHHHCCCCHHHHHHHHHHCCCCCEE MLFSATIPEKVENLCKKYMNNPENININPENITTGTINQCYYEVEDKDKFYLLQKIIYKE EEEECCCHHHHHHHHHHHCCCCCCEECCCCCCCCCCHHHEEEEECCCCHHHHHHHHHHHH VVDNSIIFCNTREKVDEVLKHMKKKGLNAIGLHGGMEQKDRLETMKKFKEGEFQFLVCTD HHCCCEEEECCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEC VAARGIHIENISHVINYEMPYEKESYVHRIGRTGRAGKEGVAITFIEPNKVRFLKDIEDY HHHCCEEHCCHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHH IEKEIPKRKEPSSEEVAKGKKIFEENIKNRIKTKVPKDNKKQKDITKIYISAGRKKKIRP HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEECCCCCCCCC GDIVGAITSIEGINVDNIGIIDIQDNHSYVDILERKGDIVLKASEDMKIKGKKVRIQRAV CHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHCCCCEEEEECCCCEECCCEEEEEECC K C >Mature Secondary Structure MNKLTFENYKLSDEILKSLGKLGYKNPSEVQKQVIPLILKDKDIIVKSETGSGKTAAFSI CCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCEEECCCEEEEEECCCCCCEEEEEC PICEKLELEEKDPQVLVLTPTRELALQIKEEISSIALYKRLRCTAIFGKQPMSLQKRELK CCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHH QRVHLVVGTPGRTLDHIERENLNLKKIKYFVLDEADEMLNMGFIDQVEAVIKRLPKNRVT HHEEEEECCCCCHHHHHHHCCCCHHHEEEEEECCHHHHHCCCCHHHHHHHHHHCCCCCEE MLFSATIPEKVENLCKKYMNNPENININPENITTGTINQCYYEVEDKDKFYLLQKIIYKE EEEECCCHHHHHHHHHHHCCCCCCEECCCCCCCCCCHHHEEEEECCCCHHHHHHHHHHHH VVDNSIIFCNTREKVDEVLKHMKKKGLNAIGLHGGMEQKDRLETMKKFKEGEFQFLVCTD HHCCCEEEECCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEC VAARGIHIENISHVINYEMPYEKESYVHRIGRTGRAGKEGVAITFIEPNKVRFLKDIEDY HHHCCEEHCCHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHH IEKEIPKRKEPSSEEVAKGKKIFEENIKNRIKTKVPKDNKKQKDITKIYISAGRKKKIRP HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEECCCCCCCCC GDIVGAITSIEGINVDNIGIIDIQDNHSYVDILERKGDIVLKASEDMKIKGKKVRIQRAV CHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHCCCCEEEEECCCCEECCCEEEEEECC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377; 10481020 [H]